| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is livM [C]
Identifier: 124265892
GI number: 124265892
Start: 729538
End: 730674
Strand: Direct
Name: livM [C]
Synonym: Mpe_A0699
Alternate gene names: 124265892
Gene position: 729538-730674 (Clockwise)
Preceding gene: 124265891
Following gene: 124265893
Centisome position: 18.04
GC content: 66.31
Gene sequence:
>1137_bases ATGAGTGCCGTGCTGACGCCTCCTCTGCCCGTGGCACCGCCGCGCAGTCGCCTGCTGCAGGGCAAGGCCTGGACGGCGCT GCTGGCCGCGGTGATCACCGTGACCGTGCTGGTGCCGGTGCTGAACCTCGTGGTGCCGGCCGGCAGCGCCTTCCACCTGA GCGACTACGCGGTGGCGCTGATCGGCAAGATCATGTGCTACGCGATCTGCGCGCTGGCCATGGACCTGATCTGGGGCTAC ACCGGCATCCTGTCGCTCGGCCACGGCCTGTTCTTCGCGCTCGGCGGCTACGCGATGGGCATGTACCTCATGCGCCAGAT CGGCCGCGACGGCAACTACCAGTCGGACCTGCCCGACTTCATGGTCTTCCTCGACTGGAAGGAGCTGCCCTGGCACTGGA GCTTCAGCGACTCCTTCGTGGCCACGCTGTTCCTGATCGTCGCGGTGCCGGGCCTGCTGGCCTTCGTGTTCGGCTTCTTC GCGTTCCGCTCGCGCATCAAGGGCGTGTACTTCTCGATCATCACGCAGGCGCTCACCTTCGCCGCGATGCTGCTGTTCTT TCGCAACGAAACCGGCTTCGGCGGCAACAATGGCTTCACCGACTTCAAGCGCATCCTCTCCATCCCGATTGCGCAGCCGT CCACGCGCATGGTGCTGTTCGTGCTGACCGGGCTCACGCTGATCGGCTTCTTCCTGCTGGCGCGCTGGCTCATCCACACC AAGTTCGGCCGCGTGCTGCAGGCCATCCGCGACGCCGAGAACCGCGTCATGTTCTGCGGCTACGAGCCGCTGAACTACAA GCTCGCGATCTGGACGCTGTCGGCGGTGATGTGCGGCATCGCCGGTGCGCTGTACGTGCCGCAGGTGGGCATCATCAACC CGGGCGAGATGTCGCCGGCCGCCAGCATCGAGATCGCGATCTGGGCCGCGGTGGGCGGCCGCGCCACGCTGATCGGCCCG ATCGTCGGTGCCTTCTTCGTCAACTTCGCGAAGAGCTGGTTCACGCAGGTCTTCCCCGAGTTCTGGCTGTACTTCCTGGG CGCGCTGTTCATCGCCGTCACGCTGTTCCTGCCGGACGGCATCGTCGGCGGCGTGAAGCGGCTGCTGGGCCGCGGCAGCA AGGAGAAGCGCGCATGA
Upstream 100 bases:
>100_bases GGGCCGGCGCCGTGCTGGCGAAGATCATCGTGCTGGTGTTCATCGTGGTGTTCATCCAGAAGCGGCCGCAGGGGCTGTTC GCATTGAAGGGGAGAGAGGC
Downstream 100 bases:
>100_bases CGCCCGAGCTGATGGAGGCCGGCGCCCGCACCCGCGAGCGCATGGCCGCGAAGCCCGAGGCCGGCAAGTCGGGCGGCCGG GCGGCGAGCTACAGCCGTGT
Product: putative permease transporter transmembrane protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: Urea ABC Transporter Permease Protein UrtC; Branched-Chain Amino Acid ABC Transporter Permease Protein; ABC Transporter Permease Protein; Urea ABC Transporter Permease UrtC; Amino Acid Or Sugar ABC Transport System Permease Protein; Branched Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid Transport System Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter ; ABC Transporter Permease; ABC Transporter; Branched-Chain Amino Acid Transporter; Urea ABC Transporter Permease; Permease Of ABC Transporter; ABC Transporter Membrane Spanning Protein; Urea Or Short-Chain Amide ABC Transporter Permease Protein; Amide-Urea Transport System Permease Protein; Branched-Chain Amino Acid Transport Permease; Branched Chain Amino Acid ABC Transporter Permease Protein; Amide-Urea Transporter Permease Protein; Transmembrane Component Of ABC Transporter; High-Affinity Branched-Chain Amino Acid Transport System; Urea/Short Chain-Amide ABC Transporter Permease Protein; Urea ABC Transporter Permease Protein; ABC Transporter Membrane Protein; ABC-Type Urea Transport System Permease Protein II; Urea Transport System Permease Protein; ABC Transporter Inner-Membrane Translocator; ABC-Type Transport System Permease Protein; Amino Acid ABC Transporter Permease Protein; ABC Transporter-Like Protein; Integral Membrane Protein; Urea ABC Transporter Inner-Membrane Subunit UrtC; ABC Branched Amino Acid Transporter Permease Component; Branched-Chain Amino Acid Transport System Permease; Amino Acid/Amide ABC Transporter Membrane HAAT Family; Permease Protein Of ABC Transporter; Urea Transport System Permease Component Protein; Permease Component Of ABC Transporter; Urea Or Short-Chain Amide ABC Transporter; Permease Transporter Transmembrane Protein; Urea ABC Transport Permease Component UrtC; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSAVLTPPLPVAPPRSRLLQGKAWTALLAAVITVTVLVPVLNLVVPAGSAFHLSDYAVALIGKIMCYAICALAMDLIWGY TGILSLGHGLFFALGGYAMGMYLMRQIGRDGNYQSDLPDFMVFLDWKELPWHWSFSDSFVATLFLIVAVPGLLAFVFGFF AFRSRIKGVYFSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRILSIPIAQPSTRMVLFVLTGLTLIGFFLLARWLIHT KFGRVLQAIRDAENRVMFCGYEPLNYKLAIWTLSAVMCGIAGALYVPQVGIINPGEMSPAASIEIAIWAAVGGRATLIGP IVGAFFVNFAKSWFTQVFPEFWLYFLGALFIAVTLFLPDGIVGGVKRLLGRGSKEKRA
Sequences:
>Translated_378_residues MSAVLTPPLPVAPPRSRLLQGKAWTALLAAVITVTVLVPVLNLVVPAGSAFHLSDYAVALIGKIMCYAICALAMDLIWGY TGILSLGHGLFFALGGYAMGMYLMRQIGRDGNYQSDLPDFMVFLDWKELPWHWSFSDSFVATLFLIVAVPGLLAFVFGFF AFRSRIKGVYFSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRILSIPIAQPSTRMVLFVLTGLTLIGFFLLARWLIHT KFGRVLQAIRDAENRVMFCGYEPLNYKLAIWTLSAVMCGIAGALYVPQVGIINPGEMSPAASIEIAIWAAVGGRATLIGP IVGAFFVNFAKSWFTQVFPEFWLYFLGALFIAVTLFLPDGIVGGVKRLLGRGSKEKRA >Mature_377_residues SAVLTPPLPVAPPRSRLLQGKAWTALLAAVITVTVLVPVLNLVVPAGSAFHLSDYAVALIGKIMCYAICALAMDLIWGYT GILSLGHGLFFALGGYAMGMYLMRQIGRDGNYQSDLPDFMVFLDWKELPWHWSFSDSFVATLFLIVAVPGLLAFVFGFFA FRSRIKGVYFSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRILSIPIAQPSTRMVLFVLTGLTLIGFFLLARWLIHTK FGRVLQAIRDAENRVMFCGYEPLNYKLAIWTLSAVMCGIAGALYVPQVGIINPGEMSPAASIEIAIWAAVGGRATLIGPI VGAFFVNFAKSWFTQVFPEFWLYFLGALFIAVTLFLPDGIVGGVKRLLGRGSKEKRA
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789865, Length=338, Percent_Identity=22.7810650887574, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41461; Mature: 41330
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLTPPLPVAPPRSRLLQGKAWTALLAAVITVTVLVPVLNLVVPAGSAFHLSDYAVAL CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH IGKIMCYAICALAMDLIWGYTGILSLGHGLFFALGGYAMGMYLMRQIGRDGNYQSDLPDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH MVFLDWKELPWHWSFSDSFVATLFLIVAVPGLLAFVFGFFAFRSRIKGVYFSIITQALTF HEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMLLFFRNETGFGGNNGFTDFKRILSIPIAQPSTRMVLFVLTGLTLIGFFLLARWLIHT HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KFGRVLQAIRDAENRVMFCGYEPLNYKLAIWTLSAVMCGIAGALYVPQVGIINPGEMSPA HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ASIEIAIWAAVGGRATLIGPIVGAFFVNFAKSWFTQVFPEFWLYFLGALFIAVTLFLPDG CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IVGGVKRLLGRGSKEKRA HHHHHHHHHCCCCCCCCC >Mature Secondary Structure SAVLTPPLPVAPPRSRLLQGKAWTALLAAVITVTVLVPVLNLVVPAGSAFHLSDYAVAL CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH IGKIMCYAICALAMDLIWGYTGILSLGHGLFFALGGYAMGMYLMRQIGRDGNYQSDLPDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH MVFLDWKELPWHWSFSDSFVATLFLIVAVPGLLAFVFGFFAFRSRIKGVYFSIITQALTF HEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMLLFFRNETGFGGNNGFTDFKRILSIPIAQPSTRMVLFVLTGLTLIGFFLLARWLIHT HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KFGRVLQAIRDAENRVMFCGYEPLNYKLAIWTLSAVMCGIAGALYVPQVGIINPGEMSPA HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ASIEIAIWAAVGGRATLIGPIVGAFFVNFAKSWFTQVFPEFWLYFLGALFIAVTLFLPDG CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IVGGVKRLLGRGSKEKRA HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA