| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is fhuA [H]
Identifier: 124265881
GI number: 124265881
Start: 718881
End: 721031
Strand: Direct
Name: fhuA [H]
Synonym: Mpe_A0688
Alternate gene names: 124265881
Gene position: 718881-721031 (Clockwise)
Preceding gene: 124265880
Following gene: 124265882
Centisome position: 17.78
GC content: 67.46
Gene sequence:
>2151_bases ATGAACCGCCTGCATCGTGTTTCCCCGCTGACCTTCGCCTGCCTCGCCCTGGCTGCCCATGCGCAGTCCGAACCGCCTTC CCAGGTCCTGCCGCCGGTCCAGGTGCAGGGCCAGCGCGACGACTACCGCGCCCCCGAAACCACCACCGGCAACCGGACGT CCACGCCGTCGCTCCAAAGCCCTCAGAGCGTGCAGGTCGTGCCGCGCGCCGTCATCGAGGACCAGAACGCACTGAACCTC GCCGAAGCGCTCCGCAACGTGTCCGGCGTGCAGTTCGATTTCGGGTTCAACGGGACGGCCATGCCGCTGGTCGTGCTGCG AGGCTTTCCGAGCGTATCGATGACCGCCATGGGGCCGATGTCGGGCAGCTCGACCTACTACCTGGACGGCACCAAGGTCA CCGGCGTCCCGATCAACATGGCCAACGTGCTGGCCGTCGAGGTGATCAAGGGGCCGTCGAGCGTCCTGTACGGGCGCGCC GAACCGGGCGGGCTGGTCAACGTGGTCAGCAAGCCGATCAGCGTCGTGCCCGCCATGAGCCTGGAGCAGACCGTCGGGGA GTACGGCCTGTCGCGCACGGCGGTGGAGGCATCCGGCCCTCTGAACGAGGAACGCAGTCTGCGTGGCCGGGCGTCCGCCT CGTACTACACGGCCGATTCCATCCGCGACTTCGTCGAGGACAAGCTCGGCGCCTTCGGCGCCAGCCTGAGCTGGCTGCCC AGCGCGCAGACCACCTTGACGGGAACGCTGGACTACAGCCACCAGCGCTACCGCACCGACTACGGCGTGCCGGCCTTGGG CGACCGGCCCGCCGATCTGCCGTGGTCGCGGCAGTTCAACGACTCGCCGCAGCTCTCCAGCAGCAAGACCACCACCCTGA AGCTGGAAGGCGAGCACCGCCTGTCCGAGGCCTGGCAGCTCAAGGGCAAGCTCCTGACCCTGCGCAGCGACACCTCCGAG ATGGACATCTCGCCCTATCGCGCCGACTACGGCATGGGCATGACGCCCGACGCCACCTGCCCGGGCACGGGCAATCCGCT GTGCCGCTACTACTTCTACGTGCGACCGGACGGGCGCTACCGGCTGGACCAGTTCAACCTCGACCTGATCGGCAAGATCG ACACCGGCGGGATCCAGCACACCGTGTTGCTCGGCGTCGATGCCTACAGCGGCCGCAAGACCGGCACGACCTACTTCCAG CAGATCGGCTCGGTGGACATCTACACGCCGGCGCTGGGCAGCACGCCGCCGCTGGACCTGGGCATGTCCATGCCGATGGA CATCGAGGATCGCAACCGCTGGACCAGCATCTACGTGCAGGATCAACTGGCCCTGGGCCAGGGCGTCTTCCTGACCGCCG CGTTGCGGCACGACCGCACCAGCGCCATCTACGCCGCCCCGGGCACCGAGCCCAACAAGGCTTCGTTCACCACGCCACGA CTCGGTGCGGTCTGGCAGTTCGCCTCCAACCAGTCGATCTACGCCCAGTACCAGGACGCCGTGTCCGCCAACAACGGCCG GGACACGGTGACCGGGGCCGCTCTCAGCGCCGAGCGCGCCAGGCAGTTCGAGATCGGCCACAAGATCGACTGGCTCGACG GCAAGCTCAGTTCGACCCTTGCGGCGTACGAGCTGACCAAGCGCAACCGTGGGGGCTCGGTCCCGGTCGCGACGCCGCCC TTCTACAACACCGTCACGGTGGGCGAAGCCCGCTCCCGTGGCGTCGAATGGGATCTTTCGGGGCAGGTCTCACGCAGTCT GTCGCTGATCGCCTCCTATGCCTACACCGACACCCGCGTGCTGGTCGATCCGACCTACCAGGGCAAGAAGCTGGCCAACG TGGCGCGGCATACCGGCAGCCTCTGGGCGCGCTACGCCATCGACAGCCAGTGGAGCACGGGTGCCGGCGTCTTTGCACAA GGTCAGCGCCAGGGCGATACGGGCAATACCTTCCAGCTGCCGGGGTACGGACGGGTCGACGCCATGCTCGCCTACCGCTT CGCGCTGCAGGATGCCCGGGCCGCGCTGCAGTTCAACGTCGACAACGTGTTCGATCGCAAGTACTACACGGGCAGCCATC AGTTCGTGGCCGACTGGGTCAAGCTGGGGTCACCGCGGACAGTCAAGGCGACGCTGCGGCTGGATTACTAG
Upstream 100 bases:
>100_bases TGGTGTCCCTGCCCGCAGCCTTGCCAAGCGCTTGAGCGATGCCTCGCGGGCGCCGTCGAGCGCTGCTCGCCGAGGTACCA ACTTCTCCAGAGACGAACCC
Downstream 100 bases:
>100_bases GAGAAACTCGCAATGCTGCATCGCCTAGCGCCGCCGCTGCTGGCCATCGCCCTGACCGGCTGCGGCGACCGTGCCGTGCC CGAGGTACAGCCGCCGCCGA
Product: TonB-dependent receptor protein
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MNRLHRVSPLTFACLALAAHAQSEPPSQVLPPVQVQGQRDDYRAPETTTGNRTSTPSLQSPQSVQVVPRAVIEDQNALNL AEALRNVSGVQFDFGFNGTAMPLVVLRGFPSVSMTAMGPMSGSSTYYLDGTKVTGVPINMANVLAVEVIKGPSSVLYGRA EPGGLVNVVSKPISVVPAMSLEQTVGEYGLSRTAVEASGPLNEERSLRGRASASYYTADSIRDFVEDKLGAFGASLSWLP SAQTTLTGTLDYSHQRYRTDYGVPALGDRPADLPWSRQFNDSPQLSSSKTTTLKLEGEHRLSEAWQLKGKLLTLRSDTSE MDISPYRADYGMGMTPDATCPGTGNPLCRYYFYVRPDGRYRLDQFNLDLIGKIDTGGIQHTVLLGVDAYSGRKTGTTYFQ QIGSVDIYTPALGSTPPLDLGMSMPMDIEDRNRWTSIYVQDQLALGQGVFLTAALRHDRTSAIYAAPGTEPNKASFTTPR LGAVWQFASNQSIYAQYQDAVSANNGRDTVTGAALSAERARQFEIGHKIDWLDGKLSSTLAAYELTKRNRGGSVPVATPP FYNTVTVGEARSRGVEWDLSGQVSRSLSLIASYAYTDTRVLVDPTYQGKKLANVARHTGSLWARYAIDSQWSTGAGVFAQ GQRQGDTGNTFQLPGYGRVDAMLAYRFALQDARAALQFNVDNVFDRKYYTGSHQFVADWVKLGSPRTVKATLRLDY
Sequences:
>Translated_716_residues MNRLHRVSPLTFACLALAAHAQSEPPSQVLPPVQVQGQRDDYRAPETTTGNRTSTPSLQSPQSVQVVPRAVIEDQNALNL AEALRNVSGVQFDFGFNGTAMPLVVLRGFPSVSMTAMGPMSGSSTYYLDGTKVTGVPINMANVLAVEVIKGPSSVLYGRA EPGGLVNVVSKPISVVPAMSLEQTVGEYGLSRTAVEASGPLNEERSLRGRASASYYTADSIRDFVEDKLGAFGASLSWLP SAQTTLTGTLDYSHQRYRTDYGVPALGDRPADLPWSRQFNDSPQLSSSKTTTLKLEGEHRLSEAWQLKGKLLTLRSDTSE MDISPYRADYGMGMTPDATCPGTGNPLCRYYFYVRPDGRYRLDQFNLDLIGKIDTGGIQHTVLLGVDAYSGRKTGTTYFQ QIGSVDIYTPALGSTPPLDLGMSMPMDIEDRNRWTSIYVQDQLALGQGVFLTAALRHDRTSAIYAAPGTEPNKASFTTPR LGAVWQFASNQSIYAQYQDAVSANNGRDTVTGAALSAERARQFEIGHKIDWLDGKLSSTLAAYELTKRNRGGSVPVATPP FYNTVTVGEARSRGVEWDLSGQVSRSLSLIASYAYTDTRVLVDPTYQGKKLANVARHTGSLWARYAIDSQWSTGAGVFAQ GQRQGDTGNTFQLPGYGRVDAMLAYRFALQDARAALQFNVDNVFDRKYYTGSHQFVADWVKLGSPRTVKATLRLDY >Mature_716_residues MNRLHRVSPLTFACLALAAHAQSEPPSQVLPPVQVQGQRDDYRAPETTTGNRTSTPSLQSPQSVQVVPRAVIEDQNALNL AEALRNVSGVQFDFGFNGTAMPLVVLRGFPSVSMTAMGPMSGSSTYYLDGTKVTGVPINMANVLAVEVIKGPSSVLYGRA EPGGLVNVVSKPISVVPAMSLEQTVGEYGLSRTAVEASGPLNEERSLRGRASASYYTADSIRDFVEDKLGAFGASLSWLP SAQTTLTGTLDYSHQRYRTDYGVPALGDRPADLPWSRQFNDSPQLSSSKTTTLKLEGEHRLSEAWQLKGKLLTLRSDTSE MDISPYRADYGMGMTPDATCPGTGNPLCRYYFYVRPDGRYRLDQFNLDLIGKIDTGGIQHTVLLGVDAYSGRKTGTTYFQ QIGSVDIYTPALGSTPPLDLGMSMPMDIEDRNRWTSIYVQDQLALGQGVFLTAALRHDRTSAIYAAPGTEPNKASFTTPR LGAVWQFASNQSIYAQYQDAVSANNGRDTVTGAALSAERARQFEIGHKIDWLDGKLSSTLAAYELTKRNRGGSVPVATPP FYNTVTVGEARSRGVEWDLSGQVSRSLSLIASYAYTDTRVLVDPTYQGKKLANVARHTGSLWARYAIDSQWSTGAGVFAQ GQRQGDTGNTFQLPGYGRVDAMLAYRFALQDARAALQFNVDNVFDRKYYTGSHQFVADWVKLGSPRTVKATLRLDY
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=690, Percent_Identity=28.1159420289855, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1787344, Length=754, Percent_Identity=24.6684350132626, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1787024, Length=790, Percent_Identity=23.5443037974684, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78034; Mature: 78034
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLHRVSPLTFACLALAAHAQSEPPSQVLPPVQVQGQRDDYRAPETTTGNRTSTPSLQS CCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC PQSVQVVPRAVIEDQNALNLAEALRNVSGVQFDFGFNGTAMPLVVLRGFPSVSMTAMGPM CCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCEEEECCC SGSSTYYLDGTKVTGVPINMANVLAVEVIKGPSSVLYGRAEPGGLVNVVSKPISVVPAMS CCCCEEEECCCEEECCCCCHHHEEEEEEECCCCCEEEECCCCCCCHHHHHCCHHHCCCCH LEQTVGEYGLSRTAVEASGPLNEERSLRGRASASYYTADSIRDFVEDKLGAFGASLSWLP HHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC SAQTTLTGTLDYSHQRYRTDYGVPALGDRPADLPWSRQFNDSPQLSSSKTTTLKLEGEHR CCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH LSEAWQLKGKLLTLRSDTSEMDISPYRADYGMGMTPDATCPGTGNPLCRYYFYVRPDGRY HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCE RLDQFNLDLIGKIDTGGIQHTVLLGVDAYSGRKTGTTYFQQIGSVDIYTPALGSTPPLDL EEEEECEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCC GMSMPMDIEDRNRWTSIYVQDQLALGQGVFLTAALRHDRTSAIYAAPGTEPNKASFTTPR CCCCCCCCCCCCCEEEEEEEECHHCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCC LGAVWQFASNQSIYAQYQDAVSANNGRDTVTGAALSAERARQFEIGHKIDWLDGKLSSTL CCEEEEECCCCCEEEHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCEEECCCCHHHHHH AAYELTKRNRGGSVPVATPPFYNTVTVGEARSRGVEWDLSGQVSRSLSLIASYAYTDTRV HHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHEECCCEE LVDPTYQGKKLANVARHTGSLWARYAIDSQWSTGAGVFAQGQRQGDTGNTFQLPGYGRVD EECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCEEECCCCCCHH AMLAYRFALQDARAALQFNVDNVFDRKYYTGSHQFVADWVKLGSPRTVKATLRLDY HHHHHHHHHHHHHEEEEECCCHHCCCCEECCCHHHHHHHHHCCCCCEEEEEEEECC >Mature Secondary Structure MNRLHRVSPLTFACLALAAHAQSEPPSQVLPPVQVQGQRDDYRAPETTTGNRTSTPSLQS CCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC PQSVQVVPRAVIEDQNALNLAEALRNVSGVQFDFGFNGTAMPLVVLRGFPSVSMTAMGPM CCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCEEEECCC SGSSTYYLDGTKVTGVPINMANVLAVEVIKGPSSVLYGRAEPGGLVNVVSKPISVVPAMS CCCCEEEECCCEEECCCCCHHHEEEEEEECCCCCEEEECCCCCCCHHHHHCCHHHCCCCH LEQTVGEYGLSRTAVEASGPLNEERSLRGRASASYYTADSIRDFVEDKLGAFGASLSWLP HHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC SAQTTLTGTLDYSHQRYRTDYGVPALGDRPADLPWSRQFNDSPQLSSSKTTTLKLEGEHR CCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH LSEAWQLKGKLLTLRSDTSEMDISPYRADYGMGMTPDATCPGTGNPLCRYYFYVRPDGRY HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCE RLDQFNLDLIGKIDTGGIQHTVLLGVDAYSGRKTGTTYFQQIGSVDIYTPALGSTPPLDL EEEEECEEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCC GMSMPMDIEDRNRWTSIYVQDQLALGQGVFLTAALRHDRTSAIYAAPGTEPNKASFTTPR CCCCCCCCCCCCCEEEEEEEECHHCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCC LGAVWQFASNQSIYAQYQDAVSANNGRDTVTGAALSAERARQFEIGHKIDWLDGKLSSTL CCEEEEECCCCCEEEHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCEEECCCCHHHHHH AAYELTKRNRGGSVPVATPPFYNTVTVGEARSRGVEWDLSGQVSRSLSLIASYAYTDTRV HHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHEECCCEE LVDPTYQGKKLANVARHTGSLWARYAIDSQWSTGAGVFAQGQRQGDTGNTFQLPGYGRVD EECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCEEECCCCCCHH AMLAYRFALQDARAALQFNVDNVFDRKYYTGSHQFVADWVKLGSPRTVKATLRLDY HHHHHHHHHHHHHEEEEECCCHHCCCCEECCCHHHHHHHHHCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]