Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265882

Identifier: 124265882

GI number: 124265882

Start: 721044

End: 721937

Strand: Direct

Name: 124265882

Synonym: Mpe_A0689

Alternate gene names: NA

Gene position: 721044-721937 (Clockwise)

Preceding gene: 124265881

Following gene: 124265883

Centisome position: 17.83

GC content: 66.89

Gene sequence:

>894_bases
ATGCTGCATCGCCTAGCGCCGCCGCTGCTGGCCATCGCCCTGACCGGCTGCGGCGACCGTGCCGTGCCCGAGGTACAGCC
GCCGCCGATCGAGAGGCCCTCATCGGCAGCCGACGCCGAGTCGAGGGCCAGCCTGCCCGCGCAGATCACGCCCGACAACC
ACTCGATGGTCATGGATGCCATCCTCGGCAAGCCCAGGCATGCGGTGGGCCAGATCGGCATCCTGGTCTACGACGGCGTC
AACGACCTGGACTTCATGGGCCCCCGCTACGTGCTGGGGCAGACCGGCGCGAACACCCGCCTGATCGGCCTGAAGCCCGG
CCCGATCAAGACCGTGACGGGCGTCCAGGTGGTGCCCGACGCGGTCATCGACGAAGTCACCCGGCTCGATATCCTGATCA
TCCCCGGCGGCTTCACCGGCACGATCGAGGCGGCTTACGACGACCGGGTGCTGGACTGGATCCGCACCATCGACAAGGGG
ACGATCTACACCGGGGCGATCTGCACGGGTGTCTGGATCCTCGGCGCCACCGGTCTGCTCGAGGGCCGGCAGGCCGTCTC
GCACTGGTACCGCGAGGAAGAGTTCCTCCGGAAGTACAAAGCCATCCCGGCGAACAAGCGCTACACGCACGATGGCAAGT
ACTGGACATCGGCCGGCGTGACCGCCGGCATGGACATGTCTCTCGCCCTGCTGAATGACAACTGGGGCGAGCGCTACACG
CAGGGCGTGATGCTGGACATGGAGTACGACCCGGCGCCCCCCATCCAGGGCGGGAGCCCGGCGAAGACCAGCTGGCTCGT
CGAATGGATGCTGAAGACGATGTACGACGCCGGCGTCGACCCGCTCATCGACCGGCTCGAGAAGCAACGAAGTGACAGAG
CCGCCTTGAAATGA

Upstream 100 bases:

>100_bases
CTACACGGGCAGCCATCAGTTCGTGGCCGACTGGGTCAAGCTGGGGTCACCGCGGACAGTCAAGGCGACGCTGCGGCTGG
ATTACTAGGAGAAACTCGCA

Downstream 100 bases:

>100_bases
CGACCATGCCTCACCAGAACTCCGAGGCAGCAACCCAGGAGACCCTCGATGACATCCATACCGTTGAAACTCGCCGCGGC
GGCCTTGTGCATGACCGTGC

Product: transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; ThiJ/PfpI; DJ-1/PfpI Family Protein; DJ-1/PfpI Family; Isonitrile Hydratase; ThiJ Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator DarR; DJ-1/PfpI Superfamily Protein; Transcriptional Regulator Protein; AraC Family Transcription Regulator Protein; Transcriptional Regulator Arac Family; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; Intracellular Protease/Amidase; AraC Family Regulatory Protein; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; Thij/Pfpi Family Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcription Regulator; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDAILGKPRHAVGQIGILVYDGV
NDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPDAVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKG
TIYTGAICTGVWILGATGLLEGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT
QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK

Sequences:

>Translated_297_residues
MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDAILGKPRHAVGQIGILVYDGV
NDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPDAVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKG
TIYTGAICTGVWILGATGLLEGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT
QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK
>Mature_297_residues
MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDAILGKPRHAVGQIGILVYDGV
NDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPDAVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKG
TIYTGAICTGVWILGATGLLEGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT
QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32467; Mature: 32467

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDA
CCCHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCHHHHHH
ILGKPRHAVGQIGILVYDGVNDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPD
HHCCCCHHHCEEEEEEECCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCEECCCEECCH
AVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKGTIYTGAICTGVWILGATGLL
HHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
EGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHH
QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDA
CCCHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCHHHHHH
ILGKPRHAVGQIGILVYDGVNDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPD
HHCCCCHHHCEEEEEEECCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCEECCCEECCH
AVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKGTIYTGAICTGVWILGATGLL
HHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
EGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHH
QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA