| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265882
Identifier: 124265882
GI number: 124265882
Start: 721044
End: 721937
Strand: Direct
Name: 124265882
Synonym: Mpe_A0689
Alternate gene names: NA
Gene position: 721044-721937 (Clockwise)
Preceding gene: 124265881
Following gene: 124265883
Centisome position: 17.83
GC content: 66.89
Gene sequence:
>894_bases ATGCTGCATCGCCTAGCGCCGCCGCTGCTGGCCATCGCCCTGACCGGCTGCGGCGACCGTGCCGTGCCCGAGGTACAGCC GCCGCCGATCGAGAGGCCCTCATCGGCAGCCGACGCCGAGTCGAGGGCCAGCCTGCCCGCGCAGATCACGCCCGACAACC ACTCGATGGTCATGGATGCCATCCTCGGCAAGCCCAGGCATGCGGTGGGCCAGATCGGCATCCTGGTCTACGACGGCGTC AACGACCTGGACTTCATGGGCCCCCGCTACGTGCTGGGGCAGACCGGCGCGAACACCCGCCTGATCGGCCTGAAGCCCGG CCCGATCAAGACCGTGACGGGCGTCCAGGTGGTGCCCGACGCGGTCATCGACGAAGTCACCCGGCTCGATATCCTGATCA TCCCCGGCGGCTTCACCGGCACGATCGAGGCGGCTTACGACGACCGGGTGCTGGACTGGATCCGCACCATCGACAAGGGG ACGATCTACACCGGGGCGATCTGCACGGGTGTCTGGATCCTCGGCGCCACCGGTCTGCTCGAGGGCCGGCAGGCCGTCTC GCACTGGTACCGCGAGGAAGAGTTCCTCCGGAAGTACAAAGCCATCCCGGCGAACAAGCGCTACACGCACGATGGCAAGT ACTGGACATCGGCCGGCGTGACCGCCGGCATGGACATGTCTCTCGCCCTGCTGAATGACAACTGGGGCGAGCGCTACACG CAGGGCGTGATGCTGGACATGGAGTACGACCCGGCGCCCCCCATCCAGGGCGGGAGCCCGGCGAAGACCAGCTGGCTCGT CGAATGGATGCTGAAGACGATGTACGACGCCGGCGTCGACCCGCTCATCGACCGGCTCGAGAAGCAACGAAGTGACAGAG CCGCCTTGAAATGA
Upstream 100 bases:
>100_bases CTACACGGGCAGCCATCAGTTCGTGGCCGACTGGGTCAAGCTGGGGTCACCGCGGACAGTCAAGGCGACGCTGCGGCTGG ATTACTAGGAGAAACTCGCA
Downstream 100 bases:
>100_bases CGACCATGCCTCACCAGAACTCCGAGGCAGCAACCCAGGAGACCCTCGATGACATCCATACCGTTGAAACTCGCCGCGGC GGCCTTGTGCATGACCGTGC
Product: transcriptional regulator
Products: NA
Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; ThiJ/PfpI; DJ-1/PfpI Family Protein; DJ-1/PfpI Family; Isonitrile Hydratase; ThiJ Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator DarR; DJ-1/PfpI Superfamily Protein; Transcriptional Regulator Protein; AraC Family Transcription Regulator Protein; Transcriptional Regulator Arac Family; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; Intracellular Protease/Amidase; AraC Family Regulatory Protein; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; Thij/Pfpi Family Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcription Regulator; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDAILGKPRHAVGQIGILVYDGV NDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPDAVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKG TIYTGAICTGVWILGATGLLEGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK
Sequences:
>Translated_297_residues MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDAILGKPRHAVGQIGILVYDGV NDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPDAVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKG TIYTGAICTGVWILGATGLLEGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK >Mature_297_residues MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDAILGKPRHAVGQIGILVYDGV NDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPDAVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKG TIYTGAICTGVWILGATGLLEGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32467; Mature: 32467
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDA CCCHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCHHHHHH ILGKPRHAVGQIGILVYDGVNDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPD HHCCCCHHHCEEEEEEECCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCEECCCEECCH AVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKGTIYTGAICTGVWILGATGLL HHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH EGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHH QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLHRLAPPLLAIALTGCGDRAVPEVQPPPIERPSSAADAESRASLPAQITPDNHSMVMDA CCCHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCHHHHHH ILGKPRHAVGQIGILVYDGVNDLDFMGPRYVLGQTGANTRLIGLKPGPIKTVTGVQVVPD HHCCCCHHHCEEEEEEECCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCEECCCEECCH AVIDEVTRLDILIIPGGFTGTIEAAYDDRVLDWIRTIDKGTIYTGAICTGVWILGATGLL HHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH EGRQAVSHWYREEEFLRKYKAIPANKRYTHDGKYWTSAGVTAGMDMSLALLNDNWGERYT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHH QGVMLDMEYDPAPPIQGGSPAKTSWLVEWMLKTMYDAGVDPLIDRLEKQRSDRAALK CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA