| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is ppaX [H]
Identifier: 124265851
GI number: 124265851
Start: 693273
End: 693941
Strand: Direct
Name: ppaX [H]
Synonym: Mpe_A0658
Alternate gene names: 124265851
Gene position: 693273-693941 (Clockwise)
Preceding gene: 124265850
Following gene: 124265852
Centisome position: 17.14
GC content: 71.9
Gene sequence:
>669_bases ATGAGCGCATTCCGCCCCCGCCAGTTCGACCTCGTCGTGTTCGACTGGGACGGCACGCTGTACGACTCCACCGCGCTGAT CGTCAAGTGCATCCAGGCGGCCGCCGCCGACCTCGGCACCGAGGTGCCGGGCGACACCCAGGCCGCCTACGTGATCGGCA TGGGCCTGCAGGAGGCGCTGCAGCATGCCGTGCCCGGCCTGCCGCGCGAGCGCTACCCCGAGCTCGGTCAACGCTATCGG CACCACTACTTCGCGCGGCAGCACGAGCTCAGCCTGTTCGCCGGCGCGCTGGACATGCTGCACGCGCTGAAGGCGCGCCA GCACTGGCTGGGCGTGGCCACCGGCAAGTCGCGCCGTGGGCTCGACGAGGCGCTGCACACGGTGCAGCTCCAGGGTCTGT TCGACGCCACCCGCACCGCCGACGAGACCGCGTCCAAGCCGCATCCGCGCATGCTGCAGGAGCTGATGGCCGAGCTGGGC GTCGCGCCGGCCCGCACGCTGATGATCGGCGACACCACGCACGACCTGCAGCTGGCCGCCAACGCCGGCACGGCCAGCGT CGCCGTCAGCTTCGGAGCGCACGAGCCGGCGGCCTTCGAGACCTACGCGCCGCGCTTCGTGGCCCATTCGACGGCCGAGC TCGACCACTGGCTGCGCGCCCATGCCTGA
Upstream 100 bases:
>100_bases CCGCGAGCGGCGAGACGATCGAGCTCGAGGCCGCCCTGCCGGCAGAATGCCGGCTCCTCCTGACAGCCCTGCCGCGCGTC GCGGCCCCACCGCCCCCTCC
Downstream 100 bases:
>100_bases GCCCGCCGACCCCGGCACCGGCGTGCCGCTGTGCGCCTCGTCCGACCTGGCCGAGGGCGGACGGGCCGTGCTGTTCGACG TGCTCGAGCACGGCCAGCCG
Product: haloacid dehalogenase-like hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSAFRPRQFDLVVFDWDGTLYDSTALIVKCIQAAAADLGTEVPGDTQAAYVIGMGLQEALQHAVPGLPRERYPELGQRYR HHYFARQHELSLFAGALDMLHALKARQHWLGVATGKSRRGLDEALHTVQLQGLFDATRTADETASKPHPRMLQELMAELG VAPARTLMIGDTTHDLQLAANAGTASVAVSFGAHEPAAFETYAPRFVAHSTAELDHWLRAHA
Sequences:
>Translated_222_residues MSAFRPRQFDLVVFDWDGTLYDSTALIVKCIQAAAADLGTEVPGDTQAAYVIGMGLQEALQHAVPGLPRERYPELGQRYR HHYFARQHELSLFAGALDMLHALKARQHWLGVATGKSRRGLDEALHTVQLQGLFDATRTADETASKPHPRMLQELMAELG VAPARTLMIGDTTHDLQLAANAGTASVAVSFGAHEPAAFETYAPRFVAHSTAELDHWLRAHA >Mature_221_residues SAFRPRQFDLVVFDWDGTLYDSTALIVKCIQAAAADLGTEVPGDTQAAYVIGMGLQEALQHAVPGLPRERYPELGQRYRH HYFARQHELSLFAGALDMLHALKARQHWLGVATGKSRRGLDEALHTVQLQGLFDATRTADETASKPHPRMLQELMAELGV APARTLMIGDTTHDLQLAANAGTASVAVSFGAHEPAAFETYAPRFVAHSTAELDHWLRAHA
Specific function: Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=226, Percent_Identity=25.6637168141593, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 24347; Mature: 24216
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFRPRQFDLVVFDWDGTLYDSTALIVKCIQAAAADLGTEVPGDTQAAYVIGMGLQEAL CCCCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCHHHHH QHAVPGLPRERYPELGQRYRHHYFARQHELSLFAGALDMLHALKARQHWLGVATGKSRRG HHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LDEALHTVQLQGLFDATRTADETASKPHPRMLQELMAELGVAPARTLMIGDTTHDLQLAA HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEE NAGTASVAVSFGAHEPAAFETYAPRFVAHSTAELDHWLRAHA CCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAFRPRQFDLVVFDWDGTLYDSTALIVKCIQAAAADLGTEVPGDTQAAYVIGMGLQEAL CCCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCHHHHH QHAVPGLPRERYPELGQRYRHHYFARQHELSLFAGALDMLHALKARQHWLGVATGKSRRG HHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LDEALHTVQLQGLFDATRTADETASKPHPRMLQELMAELGVAPARTLMIGDTTHDLQLAA HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEE NAGTASVAVSFGAHEPAAFETYAPRFVAHSTAELDHWLRAHA CCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA