| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265852
Identifier: 124265852
GI number: 124265852
Start: 693934
End: 694344
Strand: Direct
Name: 124265852
Synonym: Mpe_A0659
Alternate gene names: NA
Gene position: 693934-694344 (Clockwise)
Preceding gene: 124265851
Following gene: 124265853
Centisome position: 17.16
GC content: 71.05
Gene sequence:
>411_bases ATGCCTGAGCCCGCCGACCCCGGCACCGGCGTGCCGCTGTGCGCCTCGTCCGACCTGGCCGAGGGCGGACGGGCCGTGCT GTTCGACGTGCTCGAGCACGGCCAGCCGCTGCGCGCCTTCGTGCTGCGCGTCGACGGCCAGCTGGTGGCCTACCTGAACC GCTGCGCCCATGTGCCGGTCGAGATGGATTGGCAGGAAGGCGAGTTCCTGGACGGTGACCGCCGCTACATCGTCTGTTCG ATCCACGGCGCCACCTACGAGCCGTCCGACGGCTACTGCATCGCCGGGCCCTGTGGCGGTGCGCGCCTCAAGGCCGTTCG CGTGGCGGAGCGCGACGGCCAGGTGAGTTGGTATCCTTCCGCGGACATCCGGCCCGCCTTCGGCGCCGCTTCCACACCGA GCAGTCCATGA
Upstream 100 bases:
>100_bases GCCGTCAGCTTCGGAGCGCACGAGCCGGCGGCCTTCGAGACCTACGCGCCGCGCTTCGTGGCCCATTCGACGGCCGAGCT CGACCACTGGCTGCGCGCCC
Downstream 100 bases:
>100_bases GCAGTTTCGACGATCCCGCCGAGCCCACGCTGGGCCCCGCCACGCCCGCCCGCCCCGCGGCCGCCGCCGGCGGCCCCGCG CCCACCAGCGTCGACGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Rieske Domain-Containing Protein; Rieske Region; Rieske Protein; Ferredoxin; Rieske; Rieske Iron-Sulfur Domain Protein; Rieske 2Fe-2S Family Protein; Rieske Iron-Sulfur Domain-Containing Protein; Ferredoxin Protein; Nitrite Reductase Ferredoxin Subunit; Ferredoxin 2Fe-2S
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPEPADPGTGVPLCASSDLAEGGRAVLFDVLEHGQPLRAFVLRVDGQLVAYLNRCAHVPVEMDWQEGEFLDGDRRYIVCS IHGATYEPSDGYCIAGPCGGARLKAVRVAERDGQVSWYPSADIRPAFGAASTPSSP
Sequences:
>Translated_136_residues MPEPADPGTGVPLCASSDLAEGGRAVLFDVLEHGQPLRAFVLRVDGQLVAYLNRCAHVPVEMDWQEGEFLDGDRRYIVCS IHGATYEPSDGYCIAGPCGGARLKAVRVAERDGQVSWYPSADIRPAFGAASTPSSP >Mature_135_residues PEPADPGTGVPLCASSDLAEGGRAVLFDVLEHGQPLRAFVLRVDGQLVAYLNRCAHVPVEMDWQEGEFLDGDRRYIVCSI HGATYEPSDGYCIAGPCGGARLKAVRVAERDGQVSWYPSADIRPAFGAASTPSSP
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14504; Mature: 14373
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPADPGTGVPLCASSDLAEGGRAVLFDVLEHGQPLRAFVLRVDGQLVAYLNRCAHVPV CCCCCCCCCCCCEECCCCCCCCCCEEEHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCE EMDWQEGEFLDGDRRYIVCSIHGATYEPSDGYCIAGPCGGARLKAVRVAERDGQVSWYPS EECCCCCCEECCCCEEEEEEECCCEECCCCCEEEECCCCCCEEEEEEEECCCCCEEEECC ADIRPAFGAASTPSSP CCCCCCCCCCCCCCCC >Mature Secondary Structure PEPADPGTGVPLCASSDLAEGGRAVLFDVLEHGQPLRAFVLRVDGQLVAYLNRCAHVPV CCCCCCCCCCCEECCCCCCCCCCEEEHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCE EMDWQEGEFLDGDRRYIVCSIHGATYEPSDGYCIAGPCGGARLKAVRVAERDGQVSWYPS EECCCCCCEECCCCEEEEEEECCCEECCCCCEEEECCCCCCEEEEEEEECCCCCEEEECC ADIRPAFGAASTPSSP CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA