| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265836
Identifier: 124265836
GI number: 124265836
Start: 676685
End: 677329
Strand: Direct
Name: 124265836
Synonym: Mpe_A0643
Alternate gene names: NA
Gene position: 676685-677329 (Clockwise)
Preceding gene: 124265835
Following gene: 124265837
Centisome position: 16.73
GC content: 74.73
Gene sequence:
>645_bases ATGAGCAATGTCGAGAACCTGCAGGGGGCCGAGGCCCTTTCGGCCCTGGTCGATGGCGAGGCCGACGCCGGCACGGCGGC CTCGCTCAGCGCGCGCTGGCGTGACGAGGCGGCTTTGCGCGAACGCTGGCACAGCTACCAGCTGATCGGTGACGTGCTGC GCTCCGAGGAGCTCGCCGGCGGGGGGCGCGACGCGGCGTTCCTTCAGCGTCTGCGCGCGCAGCTCGACCGGGAGCCGGTC GTTCTGGCGCCCCGGGCCGATCGGGTGGCCGAGGAGTCCGCTGCGGCGTTGCCCAGGCAGCGGGCCGCTGGTGGGGGATT GCGCCGCTGGGCCACGCCGGCCGCAGTGGCGGCGGGTTTCCTGGCCGTGATCGGGTCGTTGGCCGTGACCCGCCTGTCGG GGCCGCAGGCGGACGCGCCGCAGCTGGCGCAGGCGCCAGTGGTGCCGGCCGAGGCGCCCCAGCGGGTCGTCCTGTCCGCG CCCGCCGATCAGGTCGAGCCTGCCAGCGGCGTGCTGATCCGCGATGCCCGCCTCGATCAGTATCTGGCGGCGCACAAGCA GTTCGGTGGCAGCTCGGCCTTGAGCGTGCCGTCGGGTTTCCTGCGCAGCGCGACCTACGACGGCGCCACGGCGGCCGCGC GCTGA
Upstream 100 bases:
>100_bases GCGAGGCGATCGCGGAGCGTTTGCGCCCGATGCTGGAGCAGCGCTCCGGCGAGCGCTGGTGAGTAGTGTGGGCGAGCCCA GGGGCCAACGGAGTGTTCAG
Downstream 100 bases:
>100_bases ACATGCTGCAGAACATCGTCGCGCGGGGATGGCGCGCCATGCCGGCCGTCGTGCTGATGGCCGCGTTGTTGCCCTCCGCG ACCCGAGCCCAGGCCGGGGG
Product: putative transmembrane sigma-E factor negative regulatory transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSNVENLQGAEALSALVDGEADAGTAASLSARWRDEAALRERWHSYQLIGDVLRSEELAGGGRDAAFLQRLRAQLDREPV VLAPRADRVAEESAAALPRQRAAGGGLRRWATPAAVAAGFLAVIGSLAVTRLSGPQADAPQLAQAPVVPAEAPQRVVLSA PADQVEPASGVLIRDARLDQYLAAHKQFGGSSALSVPSGFLRSATYDGATAAAR
Sequences:
>Translated_214_residues MSNVENLQGAEALSALVDGEADAGTAASLSARWRDEAALRERWHSYQLIGDVLRSEELAGGGRDAAFLQRLRAQLDREPV VLAPRADRVAEESAAALPRQRAAGGGLRRWATPAAVAAGFLAVIGSLAVTRLSGPQADAPQLAQAPVVPAEAPQRVVLSA PADQVEPASGVLIRDARLDQYLAAHKQFGGSSALSVPSGFLRSATYDGATAAAR >Mature_213_residues SNVENLQGAEALSALVDGEADAGTAASLSARWRDEAALRERWHSYQLIGDVLRSEELAGGGRDAAFLQRLRAQLDREPVV LAPRADRVAEESAAALPRQRAAGGGLRRWATPAAVAAGFLAVIGSLAVTRLSGPQADAPQLAQAPVVPAEAPQRVVLSAP ADQVEPASGVLIRDARLDQYLAAHKQFGGSSALSVPSGFLRSATYDGATAAAR
Specific function: Unknown
COG id: COG3073
COG function: function code T; Negative regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22238; Mature: 22107
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVENLQGAEALSALVDGEADAGTAASLSARWRDEAALRERWHSYQLIGDVLRSEELAG CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGRDAAFLQRLRAQLDREPVVLAPRADRVAEESAAALPRQRAAGGGLRRWATPAAVAAGF CCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCHHHHCCCCHHHHCCHHHHHHHH LAVIGSLAVTRLSGPQADAPQLAQAPVVPAEAPQRVVLSAPADQVEPASGVLIRDARLDQ HHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHH YLAAHKQFGGSSALSVPSGFLRSATYDGATAAAR HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure SNVENLQGAEALSALVDGEADAGTAASLSARWRDEAALRERWHSYQLIGDVLRSEELAG CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGRDAAFLQRLRAQLDREPVVLAPRADRVAEESAAALPRQRAAGGGLRRWATPAAVAAGF CCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCHHHHCCCCHHHHCCHHHHHHHH LAVIGSLAVTRLSGPQADAPQLAQAPVVPAEAPQRVVLSAPADQVEPASGVLIRDARLDQ HHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHH YLAAHKQFGGSSALSVPSGFLRSATYDGATAAAR HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA