Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 124265806

GI number: 124265806

Start: 646372

End: 647949

Strand: Reverse

Name: ycdQ [C]

Synonym: Mpe_A0613

Alternate gene names: 124265806

Gene position: 647949-646372 (Counterclockwise)

Preceding gene: 124265811

Following gene: 124265805

Centisome position: 16.02

GC content: 68.88

Gene sequence:

>1578_bases
GTGGCCTTCGTGGCAATCGTCTGGGAGTCGAACGGCATACTACCGGGCCGCTCCGCGCCGCCTGCCGGGAGGCGTTCGAT
CAGCGCCCGCCTGCCTGGTCGAGGTTGCCGCCACGAATGGGAGAAGATGACGTTTTCGCCTCGGTTTTTCTGGTTCTACC
TGCAGCGCCGCCATGCGGAGGCCCTGGCGACGCTGCCGCAGGAAACGCTGACCCGTAAGAGCTCGCATGAGCTCTGGTCA
TTCTACAAACTCGGCATGTACGAGAGCGTGTCTGCGAGTGCGCGCCACGACGACGGCTGGCGTGGCGGTTTCGCCCGCAC
AGTCTCGCTGGCCGCGTGCGGCCAGCCTGCGGCCGCCATGCAAGAGGCGGCGCGACTGACCCGGCGCTGGCCGCGCGACA
GTCTGCGCACGGCCCTGGCGAATGCCCTGGCACCCTATGTTCCGGAGTTCGCGTTGCACCTGCTTGACGGGATCGAACGC
TCCACACTGCTGCGCGCCGCACTGCTGCTGAGGACGGACGCCACGCGCGAGGCCCGCAGTTTGGTGCAGCAGGCACTCCA
GCAGTCCTCAGCGAGCGGACGTTCTGCGCAGTGGCACCTGCTGGCCAGCAATGCCGATCCCGGGTCGCCGACGAAACAGC
TGGCGCACCTGAATGCCTTTCTTGGAGGCTACCGCCTGCCGCCGCTCACGCTGCTCGACACCGATCGCCCTCCAGGGCCG
ACCAACCTGCAGATCGCCGAGGCCTTGCCACCACGCCGCGGCCCACAGGTCAGCGTCGTGATGACAGCCTACCAGTCCGG
CGAGCGTATCGGACCAGCGATCCGTTCGGTGCTGGAACAGACGTACCAGGACATCGAACTGATCGTGGTGGACGATGCCA
GCGACGACGACACCGCGGCCGTCATCGCCGGCTGGGCAGCGCGTGACGCACGGGTCAAGCCGATCCGGCTCCCGCACAAC
GTAGGCACCTACGCCGCCAAGAACATCGGCCTGCGCCACGCATCCGGCGAGTTCGCCACCTGCCACGATTCCGACGACTG
GTCCCATCCCTTCAAGATCGAGCGCCAGGTCGAACCGCTGCTGAACGACCGCCGGCTGGTGTACTCAGTGTCCGAGTGGG
TGCGGATGCAGGACGACGGTCACTATTACGCGCGGCCGGTGCATCCGCTGATGCGCGTGAACCCTTCATCGCCCCTGTTC
CGCCGCAAGCTCGTGCTGGAGCGGACCGGCGCCTGGGACTGGGTGCGGACCGGCGCGGACAGCGAGTTCGCCGCACGGCT
GCGCCTGGTGTTCGGCCGCCTCGCGATGCGGCGGATCCGGCAGCCGCTGGCTCTGGGCGCGCACCGGCCGAATTCGCTGG
TGACGGCCCCGGAGACCGGCTTCGACGCGAACGGCATCCCGTCGAAGCGCCTGGCCTACTGGGAGGGCTGGGGCCGCTGG
CACATCGACGAGCTGCGAGCCGGGCGCAATCCGCGCATGCCCGACACCCCGCCGGCGACGCGCCCTTTCGCGGTGCCTGC
GGCGCTGCTGGCCGATCCGGCCAGCCTCGCACGCTGCCTGCAGGATGCCCCTCCGTGA

Upstream 100 bases:

>100_bases
CCTCGATCGAGGCCGCCGCGTTGTAGGCCGGAATGCCGATCGTCAGCACCACGGGAGCCGGGACAGGCCGGACGTCGTGT
TCGATGTTCATCGGGGGCGT

Downstream 100 bases:

>100_bases
GTCCGCCGCTGCCGCACCGCTACGGCCTGTGCTGGTACCGCCGCCGCATGACCACGCTGGAGGCGCTGCTGGAGGCCCGC
GTGGTTCATCCGCCGCTGCT

Product: cell wall biogenesis glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MAFVAIVWESNGILPGRSAPPAGRRSISARLPGRGCRHEWEKMTFSPRFFWFYLQRRHAEALATLPQETLTRKSSHELWS
FYKLGMYESVSASARHDDGWRGGFARTVSLAACGQPAAAMQEAARLTRRWPRDSLRTALANALAPYVPEFALHLLDGIER
STLLRAALLLRTDATREARSLVQQALQQSSASGRSAQWHLLASNADPGSPTKQLAHLNAFLGGYRLPPLTLLDTDRPPGP
TNLQIAEALPPRRGPQVSVVMTAYQSGERIGPAIRSVLEQTYQDIELIVVDDASDDDTAAVIAGWAARDARVKPIRLPHN
VGTYAAKNIGLRHASGEFATCHDSDDWSHPFKIERQVEPLLNDRRLVYSVSEWVRMQDDGHYYARPVHPLMRVNPSSPLF
RRKLVLERTGAWDWVRTGADSEFAARLRLVFGRLAMRRIRQPLALGAHRPNSLVTAPETGFDANGIPSKRLAYWEGWGRW
HIDELRAGRNPRMPDTPPATRPFAVPAALLADPASLARCLQDAPP

Sequences:

>Translated_525_residues
MAFVAIVWESNGILPGRSAPPAGRRSISARLPGRGCRHEWEKMTFSPRFFWFYLQRRHAEALATLPQETLTRKSSHELWS
FYKLGMYESVSASARHDDGWRGGFARTVSLAACGQPAAAMQEAARLTRRWPRDSLRTALANALAPYVPEFALHLLDGIER
STLLRAALLLRTDATREARSLVQQALQQSSASGRSAQWHLLASNADPGSPTKQLAHLNAFLGGYRLPPLTLLDTDRPPGP
TNLQIAEALPPRRGPQVSVVMTAYQSGERIGPAIRSVLEQTYQDIELIVVDDASDDDTAAVIAGWAARDARVKPIRLPHN
VGTYAAKNIGLRHASGEFATCHDSDDWSHPFKIERQVEPLLNDRRLVYSVSEWVRMQDDGHYYARPVHPLMRVNPSSPLF
RRKLVLERTGAWDWVRTGADSEFAARLRLVFGRLAMRRIRQPLALGAHRPNSLVTAPETGFDANGIPSKRLAYWEGWGRW
HIDELRAGRNPRMPDTPPATRPFAVPAALLADPASLARCLQDAPP
>Mature_524_residues
AFVAIVWESNGILPGRSAPPAGRRSISARLPGRGCRHEWEKMTFSPRFFWFYLQRRHAEALATLPQETLTRKSSHELWSF
YKLGMYESVSASARHDDGWRGGFARTVSLAACGQPAAAMQEAARLTRRWPRDSLRTALANALAPYVPEFALHLLDGIERS
TLLRAALLLRTDATREARSLVQQALQQSSASGRSAQWHLLASNADPGSPTKQLAHLNAFLGGYRLPPLTLLDTDRPPGPT
NLQIAEALPPRRGPQVSVVMTAYQSGERIGPAIRSVLEQTYQDIELIVVDDASDDDTAAVIAGWAARDARVKPIRLPHNV
GTYAAKNIGLRHASGEFATCHDSDDWSHPFKIERQVEPLLNDRRLVYSVSEWVRMQDDGHYYARPVHPLMRVNPSSPLFR
RKLVLERTGAWDWVRTGADSEFAARLRLVFGRLAMRRIRQPLALGAHRPNSLVTAPETGFDANGIPSKRLAYWEGWGRWH
IDELRAGRNPRMPDTPPATRPFAVPAALLADPASLARCLQDAPP

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 58479; Mature: 58348

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVAIVWESNGILPGRSAPPAGRRSISARLPGRGCRHEWEKMTFSPRFFWFYLQRRHAE
CEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
ALATLPQETLTRKSSHELWSFYKLGMYESVSASARHDDGWRGGFARTVSLAACGQPAAAM
HHHHCCHHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHEEEHHHCCCCHHHH
QEAARLTRRWPRDSLRTALANALAPYVPEFALHLLDGIERSTLLRAALLLRTDATREARS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
LVQQALQQSSASGRSAQWHLLASNADPGSPTKQLAHLNAFLGGYRLPPLTLLDTDRPPGP
HHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
TNLQIAEALPPRRGPQVSVVMTAYQSGERIGPAIRSVLEQTYQDIELIVVDDASDDDTAA
CCEEEHHCCCCCCCCEEEEEEEEHHCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEE
VIAGWAARDARVKPIRLPHNVGTYAAKNIGLRHASGEFATCHDSDDWSHPFKIERQVEPL
EEEECCCCCCCCCEEECCCCCCCHHHHCCCCEECCCCEEEECCCCCCCCCEEEHHHHHHH
LNDRRLVYSVSEWVRMQDDGHYYARPVHPLMRVNPSSPLFRRKLVLERTGAWDWVRTGAD
HCCCCEEEEHHHHHEECCCCCEEECCCCHHHEECCCCHHHHHHHHHHHCCCCHHHHCCCC
SEFAARLRLVFGRLAMRRIRQPLALGAHRPNSLVTAPETGFDANGIPSKRLAYWEGWGRW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCE
HIDELRAGRNPRMPDTPPATRPFAVPAALLADPASLARCLQDAPP
EHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure 
AFVAIVWESNGILPGRSAPPAGRRSISARLPGRGCRHEWEKMTFSPRFFWFYLQRRHAE
EEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
ALATLPQETLTRKSSHELWSFYKLGMYESVSASARHDDGWRGGFARTVSLAACGQPAAAM
HHHHCCHHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHEEEHHHCCCCHHHH
QEAARLTRRWPRDSLRTALANALAPYVPEFALHLLDGIERSTLLRAALLLRTDATREARS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
LVQQALQQSSASGRSAQWHLLASNADPGSPTKQLAHLNAFLGGYRLPPLTLLDTDRPPGP
HHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
TNLQIAEALPPRRGPQVSVVMTAYQSGERIGPAIRSVLEQTYQDIELIVVDDASDDDTAA
CCEEEHHCCCCCCCCEEEEEEEEHHCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEE
VIAGWAARDARVKPIRLPHNVGTYAAKNIGLRHASGEFATCHDSDDWSHPFKIERQVEPL
EEEECCCCCCCCCEEECCCCCCCHHHHCCCCEECCCCEEEECCCCCCCCCEEEHHHHHHH
LNDRRLVYSVSEWVRMQDDGHYYARPVHPLMRVNPSSPLFRRKLVLERTGAWDWVRTGAD
HCCCCEEEEHHHHHEECCCCCEEECCCCHHHEECCCCHHHHHHHHHHHCCCCHHHHCCCC
SEFAARLRLVFGRLAMRRIRQPLALGAHRPNSLVTAPETGFDANGIPSKRLAYWEGWGRW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCE
HIDELRAGRNPRMPDTPPATRPFAVPAALLADPASLARCLQDAPP
EHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]