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The map label for this gene is lipA [H]

Identifier: 124265805

GI number: 124265805

Start: 645395

End: 646375

Strand: Reverse

Name: lipA [H]

Synonym: Mpe_A0612

Alternate gene names: 124265805

Gene position: 646375-645395 (Counterclockwise)

Preceding gene: 124265806

Following gene: 124265804

Centisome position: 15.98

GC content: 73.7

Gene sequence:

>981_bases
GTGAGTCCGCCGCTGCCGCACCGCTACGGCCTGTGCTGGTACCGCCGCCGCATGACCACGCTGGAGGCGCTGCTGGAGGC
CCGCGTGGTTCATCCGCCGCTGCTCGGCCGCCGGGTCGATGCCCTGCTGGCCTGGGGCCGCAAGCGCGGGACGGCGCGTG
CGCTGCGCTGGCCCTGGGCCACCGACCTGCCGGTCTGGTACGCCGAGGACGGCTTCCTGCGCTCGGTCGGCCTGGGACAC
CGCGATCCGCCGCTGTCGATCGTGCTCGACCCGATCGGCATCTACTACGATGCCACCGCGCCGTCGGGCCTGGAGGCCCT
GGTACGCGCCGGCCATGACGCCGCGCAGCAGGCCCGCGGCGAGGCGCTGGCGCGCCAGTGGCGGGCGGCCCGGGTGTCCA
AGTACAACCACGCTCCGGAGGCCGCCGCGCCGCTGGCCGGCGAGCCCTGCGTGCTGGTGGTCGACCAGACACGCGGCGAC
GCTTCGATCCATTGCGGCCTGGCCGACGAGCGCAGCTTCCGACGCATGCTGGAGGCAGCACTCGACGAGCATCCCCGGTT
CCCGGTGCTGCTGAAGGTGCACCCCGACGTCGTGGCCGGCCGCAAGCGCGGACACTTCGACGACCTGGGTGCCGCTGCAT
CGCGGGTGCATGTGCTGGCTACCGATGCGCACCCGCCGTCGCTGCTGGAGTCGGCGCAGGCCGTCTACACGGTGACGTCG
CAGATGGGTTTCGAGGCCCTGCTGTGGGGTCGGCCGGTGCGCAGCTTCGGCATGCCCTTCTACGCCGGCTGGGGGTTGAC
CGGGGACGACCTGCCGGCTCCGACCCGGCGCGCCACGCCGCAGCCGGTGGCGCTGGCCGGCCTGGTGCATGCGGCTCTGA
TCGACTACCCGCGCTACCTCGACCCCGACACCGGTCGGCGCTGCGAGGCCGAGCGGCTGATCGAATGGATCGGCATCCGC
CGCCGGAGCGCCGCGACGTGA

Upstream 100 bases:

>100_bases
GCATGCCCGACACCCCGCCGGCGACGCGCCCTTTCGCGGTGCCTGCGGCGCTGCTGGCCGATCCGGCCAGCCTCGCACGC
TGCCTGCAGGATGCCCCTCC

Downstream 100 bases:

>100_bases
GGCTGCCGCTGCAGGGACTGCAGCGGCTCGAGCACCGCCTGCTCGAACGCCGCGCCGCCCGTCAGCCCTCGCCGCTGCAG
CAGCTGGCGATCCTGCTGCG

Product: putative polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSPPLPHRYGLCWYRRRMTTLEALLEARVVHPPLLGRRVDALLAWGRKRGTARALRWPWATDLPVWYAEDGFLRSVGLGH
RDPPLSIVLDPIGIYYDATAPSGLEALVRAGHDAAQQARGEALARQWRAARVSKYNHAPEAAAPLAGEPCVLVVDQTRGD
ASIHCGLADERSFRRMLEAALDEHPRFPVLLKVHPDVVAGRKRGHFDDLGAAASRVHVLATDAHPPSLLESAQAVYTVTS
QMGFEALLWGRPVRSFGMPFYAGWGLTGDDLPAPTRRATPQPVALAGLVHAALIDYPRYLDPDTGRRCEAERLIEWIGIR
RRSAAT

Sequences:

>Translated_326_residues
MSPPLPHRYGLCWYRRRMTTLEALLEARVVHPPLLGRRVDALLAWGRKRGTARALRWPWATDLPVWYAEDGFLRSVGLGH
RDPPLSIVLDPIGIYYDATAPSGLEALVRAGHDAAQQARGEALARQWRAARVSKYNHAPEAAAPLAGEPCVLVVDQTRGD
ASIHCGLADERSFRRMLEAALDEHPRFPVLLKVHPDVVAGRKRGHFDDLGAAASRVHVLATDAHPPSLLESAQAVYTVTS
QMGFEALLWGRPVRSFGMPFYAGWGLTGDDLPAPTRRATPQPVALAGLVHAALIDYPRYLDPDTGRRCEAERLIEWIGIR
RRSAAT
>Mature_325_residues
SPPLPHRYGLCWYRRRMTTLEALLEARVVHPPLLGRRVDALLAWGRKRGTARALRWPWATDLPVWYAEDGFLRSVGLGHR
DPPLSIVLDPIGIYYDATAPSGLEALVRAGHDAAQQARGEALARQWRAARVSKYNHAPEAAAPLAGEPCVLVVDQTRGDA
SIHCGLADERSFRRMLEAALDEHPRFPVLLKVHPDVVAGRKRGHFDDLGAAASRVHVLATDAHPPSLLESAQAVYTVTSQ
MGFEALLWGRPVRSFGMPFYAGWGLTGDDLPAPTRRATPQPVALAGLVHAALIDYPRYLDPDTGRRCEAERLIEWIGIRR
RSAAT

Specific function: Involved in the phospholipid modification of the capsular polysaccharide, a strong requirement for its translocation to the cell surface [H]

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 35992; Mature: 35860

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPLPHRYGLCWYRRRMTTLEALLEARVVHPPLLGRRVDALLAWGRKRGTARALRWPWA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCC
TDLPVWYAEDGFLRSVGLGHRDPPLSIVLDPIGIYYDATAPSGLEALVRAGHDAAQQARG
CCCEEEECCCCCEECCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHH
EALARQWRAARVSKYNHAPEAAAPLAGEPCVLVVDQTRGDASIHCGLADERSFRRMLEAA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHH
LDEHPRFPVLLKVHPDVVAGRKRGHFDDLGAAASRVHVLATDAHPPSLLESAQAVYTVTS
HHCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHH
QMGFEALLWGRPVRSFGMPFYAGWGLTGDDLPAPTRRATPQPVALAGLVHAALIDYPRYL
HCCCHHHHCCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DPDTGRRCEAERLIEWIGIRRRSAAT
CCCCCCCCCHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
SPPLPHRYGLCWYRRRMTTLEALLEARVVHPPLLGRRVDALLAWGRKRGTARALRWPWA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCC
TDLPVWYAEDGFLRSVGLGHRDPPLSIVLDPIGIYYDATAPSGLEALVRAGHDAAQQARG
CCCEEEECCCCCEECCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHH
EALARQWRAARVSKYNHAPEAAAPLAGEPCVLVVDQTRGDASIHCGLADERSFRRMLEAA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHH
LDEHPRFPVLLKVHPDVVAGRKRGHFDDLGAAASRVHVLATDAHPPSLLESAQAVYTVTS
HHCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHH
QMGFEALLWGRPVRSFGMPFYAGWGLTGDDLPAPTRRATPQPVALAGLVHAALIDYPRYL
HCCCHHHHCCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DPDTGRRCEAERLIEWIGIRRRSAAT
CCCCCCCCCHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]