The gene/protein map for NC_008825 is currently unavailable.
Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yfiJ [H]

Identifier: 124265775

GI number: 124265775

Start: 610482

End: 611666

Strand: Reverse

Name: yfiJ [H]

Synonym: Mpe_A0582

Alternate gene names: 124265775

Gene position: 611666-610482 (Counterclockwise)

Preceding gene: 124265782

Following gene: 124265774

Centisome position: 15.12

GC content: 70.55

Gene sequence:

>1185_bases
ATGCCGGCACCCGACCTGTCCCCTTTGCCCCCCGCCCTGTCCACCGTGCCGCTGCGGCTGCGGGTGCTGCACCTGGAGGA
TTCGGAACTCGATCACGAATTGATGCTGGCCCACCTGCGGCGTGGCGGCATCGATCCCGACGCGCTGCGCGTCGAATCCG
AGGCCGGGTACCGGGCTGCGCTGGCCGAACCCTGGGACGTGGTGGTCAGCGACTACAACCTGCCGGGCTTCTCGGGCCTG
CGCGCCCTGGAGATCCTGCGCGACAGCCGGCTGCTGCTGCCCTTCATCCTGGTCTCGGGCGAGATCGGCGAGCAGGTGGC
GGTGCAGGCCATGCTGACCGGCGCCAACGACTACCTGCTGAAGGAAAACCTGGCGCGGCTGGTGCCGGCCCTGCTGCACG
CGATCGAAGGCACCGAGGCGCTGCGTGCCAAGCAGGAAGCCGACCTGGCCCTGGGCCAGAGCGAGCAGCGCCTGCGCGAA
CTGGCCCAGCACCTGCAAGCGAACATCGAGGCCGAACGCACGGCGATCGCTCGCGAGATCCACGACGACGTGGGCGGCTC
GCTGACCGCGCTGAAGTTCGACCTGGCGTGGATCGAGCGGCACGCCCGCGACCCGGCGGTGGCGCAGCGCGCGCAGGGCG
CACTGGAGACCGTGACGTTGGCGATCGAGTCGAGCCAGCGCATCATGCACAACCTGCGCCCGGCCATCCTGGAACAAGGC
CTGATCGCGGCGCTGCAGTGGATGACCCAGCGCTTCGAGAAGCGCAATGGCGTGGTGACGGTGTTCCGCACCAGCCGCGA
CGAGTTGCCGCCGCTGCCGGCGGGCGTCCCGCTGGCTGCCTACCGCACTGCGCAGGAGGCCCTGACCAACATCAGCAAGC
ACGCCTACGCCACCCGCGTGGAAGTCGATCTCACGGTCGCCGGCCGCGTGCTGTCGCTCGAGGTCAGCGACAACGGCCGC
GGCCTGATCCAGGAGGACCTCGCCAAGGCCCGCTCCTTCGGCATCCGCGGACTGCGTGAACGCGCGGCACAGGTCGGCGG
CTGGGTCGACCTCTCCAGCGGACCGGGCGGCACCACCATCATCCTGTCGGTGCCGCTCGAGGCCGGCGGGGATACCGGGC
CCGGCGAGTTCGACGGCCTGCAGGACGACCCGGACGACCCGACCTCCTGGGACATGCTGCGGTGA

Upstream 100 bases:

>100_bases
CCTCCGGTCGGGTGCGGCTTGGCACAATTCTTCGCCAGCCCTCCGTTCCGCGGTGTCAAGATCACGGGGCCAAACGACCG
CCAGTTCGACCCTTCCACCC

Downstream 100 bases:

>100_bases
AGGCGGCCGCTGCGACGGGCTGGCCCGACGGGCCGTGACCGCGGTAGAGTGGAAGCATGCAGTCATCCTCCCTCGCAGCG
CCGTCATGACCGTCCGCGTC

Product: signal transduction histidine kinase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPAPDLSPLPPALSTVPLRLRVLHLEDSELDHELMLAHLRRGGIDPDALRVESEAGYRAALAEPWDVVVSDYNLPGFSGL
RALEILRDSRLLLPFILVSGEIGEQVAVQAMLTGANDYLLKENLARLVPALLHAIEGTEALRAKQEADLALGQSEQRLRE
LAQHLQANIEAERTAIAREIHDDVGGSLTALKFDLAWIERHARDPAVAQRAQGALETVTLAIESSQRIMHNLRPAILEQG
LIAALQWMTQRFEKRNGVVTVFRTSRDELPPLPAGVPLAAYRTAQEALTNISKHAYATRVEVDLTVAGRVLSLEVSDNGR
GLIQEDLAKARSFGIRGLRERAAQVGGWVDLSSGPGGTTIILSVPLEAGGDTGPGEFDGLQDDPDDPTSWDMLR

Sequences:

>Translated_394_residues
MPAPDLSPLPPALSTVPLRLRVLHLEDSELDHELMLAHLRRGGIDPDALRVESEAGYRAALAEPWDVVVSDYNLPGFSGL
RALEILRDSRLLLPFILVSGEIGEQVAVQAMLTGANDYLLKENLARLVPALLHAIEGTEALRAKQEADLALGQSEQRLRE
LAQHLQANIEAERTAIAREIHDDVGGSLTALKFDLAWIERHARDPAVAQRAQGALETVTLAIESSQRIMHNLRPAILEQG
LIAALQWMTQRFEKRNGVVTVFRTSRDELPPLPAGVPLAAYRTAQEALTNISKHAYATRVEVDLTVAGRVLSLEVSDNGR
GLIQEDLAKARSFGIRGLRERAAQVGGWVDLSSGPGGTTIILSVPLEAGGDTGPGEFDGLQDDPDDPTSWDMLR
>Mature_393_residues
PAPDLSPLPPALSTVPLRLRVLHLEDSELDHELMLAHLRRGGIDPDALRVESEAGYRAALAEPWDVVVSDYNLPGFSGLR
ALEILRDSRLLLPFILVSGEIGEQVAVQAMLTGANDYLLKENLARLVPALLHAIEGTEALRAKQEADLALGQSEQRLREL
AQHLQANIEAERTAIAREIHDDVGGSLTALKFDLAWIERHARDPAVAQRAQGALETVTLAIESSQRIMHNLRPAILEQGL
IAALQWMTQRFEKRNGVVTVFRTSRDELPPLPAGVPLAAYRTAQEALTNISKHAYATRVEVDLTVAGRVLSLEVSDNGRG
LIQEDLAKARSFGIRGLRERAAQVGGWVDLSSGPGGTTIILSVPLEAGGDTGPGEFDGLQDDPDDPTSWDMLR

Specific function: Member of the two-component regulatory system yfiJ/yfiK. Probably activates yfiK by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87082311, Length=295, Percent_Identity=28.135593220339, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787474, Length=225, Percent_Identity=25.7777777777778, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42870; Mature: 42739

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPDLSPLPPALSTVPLRLRVLHLEDSELDHELMLAHLRRGGIDPDALRVESEAGYRAA
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCEEE
LAEPWDVVVSDYNLPGFSGLRALEILRDSRLLLPFILVSGEIGEQVAVQAMLTGANDYLL
CCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
KENLARLVPALLHAIEGTEALRAKQEADLALGQSEQRLRELAQHLQANIEAERTAIAREI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
HDDVGGSLTALKFDLAWIERHARDPAVAQRAQGALETVTLAIESSQRIMHNLRPAILEQG
HHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCHHHEEEEEHHHHHHHHHCCHHHHHHH
LIAALQWMTQRFEKRNGVVTVFRTSRDELPPLPAGVPLAAYRTAQEALTNISKHAYATRV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEE
EVDLTVAGRVLSLEVSDNGRGLIQEDLAKARSFGIRGLRERAAQVGGWVDLSSGPGGTTI
EEEEEEECEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCEEE
ILSVPLEAGGDTGPGEFDGLQDDPDDPTSWDMLR
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAPDLSPLPPALSTVPLRLRVLHLEDSELDHELMLAHLRRGGIDPDALRVESEAGYRAA
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCEEE
LAEPWDVVVSDYNLPGFSGLRALEILRDSRLLLPFILVSGEIGEQVAVQAMLTGANDYLL
CCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
KENLARLVPALLHAIEGTEALRAKQEADLALGQSEQRLRELAQHLQANIEAERTAIAREI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
HDDVGGSLTALKFDLAWIERHARDPAVAQRAQGALETVTLAIESSQRIMHNLRPAILEQG
HHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCHHHEEEEEHHHHHHHHHCCHHHHHHH
LIAALQWMTQRFEKRNGVVTVFRTSRDELPPLPAGVPLAAYRTAQEALTNISKHAYATRV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEE
EVDLTVAGRVLSLEVSDNGRGLIQEDLAKARSFGIRGLRERAAQVGGWVDLSSGPGGTTI
EEEEEEECEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCEEE
ILSVPLEAGGDTGPGEFDGLQDDPDDPTSWDMLR
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]