| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is hemA
Identifier: 124265717
GI number: 124265717
Start: 561490
End: 562821
Strand: Reverse
Name: hemA
Synonym: Mpe_A0524
Alternate gene names: 124265717
Gene position: 562821-561490 (Counterclockwise)
Preceding gene: 124265725
Following gene: 124265716
Centisome position: 13.92
GC content: 70.35
Gene sequence:
>1332_bases ATGTCAGTGTTTGCCCTGGGCCTGAACCACACGACCGCGCCTGTGGATTTGCGCGGTCGTTTTGCGTTCACGCTCGAACA ACTGGCTCCCACGCTGCAAGGCTTTCGCGAACGCCTGACCACAGGGCAGCGCCCCGGCACGCCCGAGGCCGCCATCCTCT CGACCTGCAACCGCACCGAGCTGTATTGCGCCGCCGAGCCGCAACTGGTGCGCCCGGCGCTCGAGTGGCTAGCCGGGGTG GGCGGCGTCGGCGCCGACACGCTGAGCCACCACGCCTACATGCTGGAGGGGGGCGAGGCGGCCCGCCACGCCTTCCGCGT GGCCAGCGGACTGGACTCCATGGTGCTGGGCGAACCTCAGATCCTGGGTCAGATGAAGCAGGCGGTGCGCGAGGCCGACG CCGCTGGCACCCTGGGCAGCACCTTGCACCAGCTGTTCCAGCGCAGCTTCGCGGTGGCGAAGGAAGTGCGGACGGCCACC GAGATCGGCACCCACTCCATCAGCATGGCGGCGGCGGCCGTGCGCCTGGCCGCGCAGTTGTTCGAGGATCTGCGCGAGAT CCGCGTGCTGTTCGTCGGCGCCGGCGAGATGATCGAGTTGGCCGCCACGCATTTCTCCGCGCGGGCACCGGCCCGCATGG CGGTGGCCAATCGCACGTTGGAACGCGGCGAGCGACTGGCCTCGCGCTTCGGTGCCGAATCGATCCGGCTGTCGGATCTG CCGCAGCGGCTGCACGAGTTCGACGCGGTGGTCTCCTGCACCGCCAGCTCACTGCCGCTGATCGGCCTGGGCGCGGTCGA GCGCGCGCTGAAAGTGCGACGCCACCGCCCGATCTTCATGGTCGACCTGGCCGTGCCGCGAGACATCGAGCCCGAGGTGG CGCGGCTCGACGACGTCTACCTGTACACCGTCGATGACCTGTCGGCCATCGTCCAGAGCGGCGGCGAGAAGCGTCTGGCT GCCGTGGCGCAGGCCGAGGCCATCATCGAGACCGGCGTGCAGAGCTTCGTGCACTGGCTGGGTCAGCGGGGCACGGTGCC GCTGATCCAGGCGCTGAACGCCCAGGCCGACAGCTGGCGCGAGAACGAACTGGTGCGCGCGCGCAAGCTGCTGGCCCGCG GCGAAAGCGTCGACGCCGTGCTCGACGCGCTGTCACGCGGGCTCACGCAGAAGATGCTGCACGGCACGCTGGCCGAACTG CACGCCTCGGACCCGGCCCAGCGTGCTCAGCTCGCCACCACAGTGTCGCGCCTGTTCCTGCGCGGGGCGATCCCGCCCGA CGCGGTGCGGCCCAGCGGGCCCCGCGAAGACGATCATCTCGACGGGGTGTAG
Upstream 100 bases:
>100_bases ATCAGAGCCGGGGCCGCTGGCCGTTGCAGAAGGCGCCGATGGCGCTCGGACTGCTGGTAAGTACGGCCGTTGAAGTCGAC ATCAATTTTATAATCAGGCC
Downstream 100 bases:
>100_bases CCCGCCGGCCGTTGCCGGCTACCGGGAGCCGCAGCGGCTGCCGGTCTGGCGCTCCCCTGCCCACCGATGAAACCCGCCCT GCGCCTGCAACTCGACCGCT
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSVFALGLNHTTAPVDLRGRFAFTLEQLAPTLQGFRERLTTGQRPGTPEAAILSTCNRTELYCAAEPQLVRPALEWLAGV GGVGADTLSHHAYMLEGGEAARHAFRVASGLDSMVLGEPQILGQMKQAVREADAAGTLGSTLHQLFQRSFAVAKEVRTAT EIGTHSISMAAAAVRLAAQLFEDLREIRVLFVGAGEMIELAATHFSARAPARMAVANRTLERGERLASRFGAESIRLSDL PQRLHEFDAVVSCTASSLPLIGLGAVERALKVRRHRPIFMVDLAVPRDIEPEVARLDDVYLYTVDDLSAIVQSGGEKRLA AVAQAEAIIETGVQSFVHWLGQRGTVPLIQALNAQADSWRENELVRARKLLARGESVDAVLDALSRGLTQKMLHGTLAEL HASDPAQRAQLATTVSRLFLRGAIPPDAVRPSGPREDDHLDGV
Sequences:
>Translated_443_residues MSVFALGLNHTTAPVDLRGRFAFTLEQLAPTLQGFRERLTTGQRPGTPEAAILSTCNRTELYCAAEPQLVRPALEWLAGV GGVGADTLSHHAYMLEGGEAARHAFRVASGLDSMVLGEPQILGQMKQAVREADAAGTLGSTLHQLFQRSFAVAKEVRTAT EIGTHSISMAAAAVRLAAQLFEDLREIRVLFVGAGEMIELAATHFSARAPARMAVANRTLERGERLASRFGAESIRLSDL PQRLHEFDAVVSCTASSLPLIGLGAVERALKVRRHRPIFMVDLAVPRDIEPEVARLDDVYLYTVDDLSAIVQSGGEKRLA AVAQAEAIIETGVQSFVHWLGQRGTVPLIQALNAQADSWRENELVRARKLLARGESVDAVLDALSRGLTQKMLHGTLAEL HASDPAQRAQLATTVSRLFLRGAIPPDAVRPSGPREDDHLDGV >Mature_442_residues SVFALGLNHTTAPVDLRGRFAFTLEQLAPTLQGFRERLTTGQRPGTPEAAILSTCNRTELYCAAEPQLVRPALEWLAGVG GVGADTLSHHAYMLEGGEAARHAFRVASGLDSMVLGEPQILGQMKQAVREADAAGTLGSTLHQLFQRSFAVAKEVRTATE IGTHSISMAAAAVRLAAQLFEDLREIRVLFVGAGEMIELAATHFSARAPARMAVANRTLERGERLASRFGAESIRLSDLP QRLHEFDAVVSCTASSLPLIGLGAVERALKVRRHRPIFMVDLAVPRDIEPEVARLDDVYLYTVDDLSAIVQSGGEKRLAA VAQAEAIIETGVQSFVHWLGQRGTVPLIQALNAQADSWRENELVRARKLLARGESVDAVLDALSRGLTQKMLHGTLAELH ASDPAQRAQLATTVSRLFLRGAIPPDAVRPSGPREDDHLDGV
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=397, Percent_Identity=43.3249370277078, Blast_Score=311, Evalue=5e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM1_METPP (A2SD47)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019721.1 - ProteinModelPortal: A2SD47 - SMR: A2SD47 - STRING: A2SD47 - GeneID: 4787347 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0524 - NMPDR: fig|279263.3.peg.2768 - eggNOG: COG0373 - HOGENOM: HBG732626 - OMA: LLIDIAN - PhylomeDB: A2SD47 - ProtClustDB: PRK00045 - BioCyc: MPET420662:MPE_A0524-MONOMER - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 47837; Mature: 47706
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 56-56 BINDING 113-113 BINDING 124-124
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFALGLNHTTAPVDLRGRFAFTLEQLAPTLQGFRERLTTGQRPGTPEAAILSTCNRTE CCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCE LYCAAEPQLVRPALEWLAGVGGVGADTLSHHAYMLEGGEAARHAFRVASGLDSMVLGEPQ EEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHCCCHHHCCCHH ILGQMKQAVREADAAGTLGSTLHQLFQRSFAVAKEVRTATEIGTHSISMAAAAVRLAAQL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FEDLREIRVLFVGAGEMIELAATHFSARAPARMAVANRTLERGERLASRFGAESIRLSDL HHHHHHHHEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH PQRLHEFDAVVSCTASSLPLIGLGAVERALKVRRHRPIFMVDLAVPRDIEPEVARLDDVY HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEE LYTVDDLSAIVQSGGEKRLAAVAQAEAIIETGVQSFVHWLGQRGTVPLIQALNAQADSWR EEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHH ENELVRARKLLARGESVDAVLDALSRGLTQKMLHGTLAELHASDPAQRAQLATTVSRLFL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RGAIPPDAVRPSGPREDDHLDGV HCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVFALGLNHTTAPVDLRGRFAFTLEQLAPTLQGFRERLTTGQRPGTPEAAILSTCNRTE CEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCE LYCAAEPQLVRPALEWLAGVGGVGADTLSHHAYMLEGGEAARHAFRVASGLDSMVLGEPQ EEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHCCCHHHCCCHH ILGQMKQAVREADAAGTLGSTLHQLFQRSFAVAKEVRTATEIGTHSISMAAAAVRLAAQL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FEDLREIRVLFVGAGEMIELAATHFSARAPARMAVANRTLERGERLASRFGAESIRLSDL HHHHHHHHEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH PQRLHEFDAVVSCTASSLPLIGLGAVERALKVRRHRPIFMVDLAVPRDIEPEVARLDDVY HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEE LYTVDDLSAIVQSGGEKRLAAVAQAEAIIETGVQSFVHWLGQRGTVPLIQALNAQADSWR EEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHH ENELVRARKLLARGESVDAVLDALSRGLTQKMLHGTLAELHASDPAQRAQLATTVSRLFL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RGAIPPDAVRPSGPREDDHLDGV HCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA