| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265689
Identifier: 124265689
GI number: 124265689
Start: 537422
End: 538855
Strand: Reverse
Name: 124265689
Synonym: Mpe_A0496
Alternate gene names: NA
Gene position: 538855-537422 (Counterclockwise)
Preceding gene: 124265690
Following gene: 124265688
Centisome position: 13.32
GC content: 70.92
Gene sequence:
>1434_bases ATGACGACACCACGACACGCCTGCGCCGCAGCGGCCCGCGGCCTGCCGCTCGTGCTGGCGAGCCTCGCGCTGGCCGGCTG CGCCTCGTTCAGCCCCGATGGCGGCTTCGACACCGTCGAGCAGGTGGCCCAGGAGCGTCTCGGCAAGGACGTCGTCTGGG CCCGGACTGCCGAGAATCAGAACCGCATCGATACCCGCGTGGCCGAACTGCTCACGCGTCCACTCACGGTCGACGATGCG GTGCAGGTCGCGCTGCTCAACAACAAGGGGCTCCAGGCCCGGTTCTTCGAGCTGGGCATCGGCGAGGCCGAGCTGGTGCA GGCCAGTCGCCTGCCGAACCCGGGCATCAGCTTCGGCCGACTGAAACGCGGCGACGAGATCGAACTCGAGCGCGGCTACC ACCTCAATCTCGCGCGGCTGCTGGCGATGCCGCTCGTGCGCCAGGTCGAGGAGCGGCGCTTCGCACAGACCCGCGGCGTC GTCACGTTGCAGCTGCTGTCGCTGGCGTCCGAGGCCCGCAAGGCCTACTTCAACGCGGTCGCCGCCGAGGAGACGGTGCG CTACCGGCGCCAGGTGCAGCAGGCGGCCGAGGCCGGCGCCGAACTGGCTCGGCGCATGGCCGAAGTCGGCAACTTCAACA AGCTGCAGCGCCTGCGCGAGCAGGGCTTCTACGCCGACGCGACGCTGGGCATGGCTCGAGCCGAGCACGCCGCGCTGGCC TCGCGCGAGAGACTGACGCGGTTGATGGGCCTGTGGGGCCCGCAGACGCGCTTCCAGTTGCCCGAGCGGCTGCCCGACCT GCCAGAGGCTCCGACGGATCAGCCCGAGATCGAGCGCGCCGCACTGGCTCAGCGCCTGGACGTCCAGGGGGCCAAGCTCG CGGCGGAGCAGACCGCGAAGAGCCTCGGTCTCACGAGGACGACGCGCTTCGTCAACGTGCTGGAGTTGGGCCGGGCCCAC AACAGTTCGAACGAGGCACCGACGCAGACGGGTTGGGAGCTGGGGCTGGAGCTGCCGCTGTTCGACTGGGGCGGCGCGCG CGTCGCGCGCGCCGAAGCGGTCTATATGCAGGCGCTGAGCCGCGCCGCAGAGACGGCGGTCAACGCCCGCTCGGAAGTGC GCGAGGCCTATGGGGCCTATCGCTCGGCCTGGGACATCGCGCGCCACCACCGCGACGAGCTCGTCCCGCTGCGCCAGCGC ATCGCCGAGGAGAACGTGCTGCGCTACAACGGCATGCTGATCGGCGTGTTCGAGCTGCTCGCGGCCGCGCGCTCGCAGAT CGCCGGCGTCAACGCCTGCATCGAGTCGCTGCGCGACTTCTGGCTCGCCCAGGCCGATCTCGAGATGGCGTTGATCGGAA AACCCGGACTGTCGGGCGCGGCCTTGGCGCTCGGCAGCAGCCCGGCTGCCGGCGATGTCGGCGCCGACCACTGA
Upstream 100 bases:
>100_bases CCGGCAAACGCTGCGCCGGTCACGCCCGCCGCGAGTGAATCGACCGGAGCCCCGTCGACGCCCCACGGCGCTCCTCATCA CCATCACTGAGAAGCGAGCG
Downstream 100 bases:
>100_bases ACGCCAGGAAGGACCTCCGATGGTTTCCCGACGCAACTTCCTCGGCCGTGCCGGCGCGGTCACTGCGGCCGTCAGCGCCG CCGCCGTCAGCAAGGTCGCG
Product: putative copper resistance-related lipoprotein
Products: NA
Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Outer Membrane Efflux Protein Involved In Copper Resistance; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Outer Membrane Protein-Like Protein; Efflux Protein; Outer Membrane Efflux Protein Involved
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MTTPRHACAAAARGLPLVLASLALAGCASFSPDGGFDTVEQVAQERLGKDVVWARTAENQNRIDTRVAELLTRPLTVDDA VQVALLNNKGLQARFFELGIGEAELVQASRLPNPGISFGRLKRGDEIELERGYHLNLARLLAMPLVRQVEERRFAQTRGV VTLQLLSLASEARKAYFNAVAAEETVRYRRQVQQAAEAGAELARRMAEVGNFNKLQRLREQGFYADATLGMARAEHAALA SRERLTRLMGLWGPQTRFQLPERLPDLPEAPTDQPEIERAALAQRLDVQGAKLAAEQTAKSLGLTRTTRFVNVLELGRAH NSSNEAPTQTGWELGLELPLFDWGGARVARAEAVYMQALSRAAETAVNARSEVREAYGAYRSAWDIARHHRDELVPLRQR IAEENVLRYNGMLIGVFELLAAARSQIAGVNACIESLRDFWLAQADLEMALIGKPGLSGAALALGSSPAAGDVGADH
Sequences:
>Translated_477_residues MTTPRHACAAAARGLPLVLASLALAGCASFSPDGGFDTVEQVAQERLGKDVVWARTAENQNRIDTRVAELLTRPLTVDDA VQVALLNNKGLQARFFELGIGEAELVQASRLPNPGISFGRLKRGDEIELERGYHLNLARLLAMPLVRQVEERRFAQTRGV VTLQLLSLASEARKAYFNAVAAEETVRYRRQVQQAAEAGAELARRMAEVGNFNKLQRLREQGFYADATLGMARAEHAALA SRERLTRLMGLWGPQTRFQLPERLPDLPEAPTDQPEIERAALAQRLDVQGAKLAAEQTAKSLGLTRTTRFVNVLELGRAH NSSNEAPTQTGWELGLELPLFDWGGARVARAEAVYMQALSRAAETAVNARSEVREAYGAYRSAWDIARHHRDELVPLRQR IAEENVLRYNGMLIGVFELLAAARSQIAGVNACIESLRDFWLAQADLEMALIGKPGLSGAALALGSSPAAGDVGADH >Mature_476_residues TTPRHACAAAARGLPLVLASLALAGCASFSPDGGFDTVEQVAQERLGKDVVWARTAENQNRIDTRVAELLTRPLTVDDAV QVALLNNKGLQARFFELGIGEAELVQASRLPNPGISFGRLKRGDEIELERGYHLNLARLLAMPLVRQVEERRFAQTRGVV TLQLLSLASEARKAYFNAVAAEETVRYRRQVQQAAEAGAELARRMAEVGNFNKLQRLREQGFYADATLGMARAEHAALAS RERLTRLMGLWGPQTRFQLPERLPDLPEAPTDQPEIERAALAQRLDVQGAKLAAEQTAKSLGLTRTTRFVNVLELGRAHN SSNEAPTQTGWELGLELPLFDWGGARVARAEAVYMQALSRAAETAVNARSEVREAYGAYRSAWDIARHHRDELVPLRQRI AEENVLRYNGMLIGVFELLAAARSQIAGVNACIESLRDFWLAQADLEMALIGKPGLSGAALALGSSPAAGDVGADH
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52123; Mature: 51992
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRHACAAAARGLPLVLASLALAGCASFSPDGGFDTVEQVAQERLGKDVVWARTAENQ CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC NRIDTRVAELLTRPLTVDDAVQVALLNNKGLQARFFELGIGEAELVQASRLPNPGISFGR HHHHHHHHHHHHCCCCCCHHHEEEEECCCCCEEEHHHHCCCHHHHHHHHCCCCCCCCHHH LKRGDEIELERGYHLNLARLLAMPLVRQVEERRFAQTRGVVTLQLLSLASEARKAYFNAV CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AAEETVRYRRQVQQAAEAGAELARRMAEVGNFNKLQRLREQGFYADATLGMARAEHAALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SRERLTRLMGLWGPQTRFQLPERLPDLPEAPTDQPEIERAALAQRLDVQGAKLAAEQTAK HHHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH SLGLTRTTRFVNVLELGRAHNSSNEAPTQTGWELGLELPLFDWGGARVARAEAVYMQALS HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEECCCCCHHHHHHHHHHHHHH RAAETAVNARSEVREAYGAYRSAWDIARHHRDELVPLRQRIAEENVLRYNGMLIGVFELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AAARSQIAGVNACIESLRDFWLAQADLEMALIGKPGLSGAALALGSSPAAGDVGADH HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure TTPRHACAAAARGLPLVLASLALAGCASFSPDGGFDTVEQVAQERLGKDVVWARTAENQ CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC NRIDTRVAELLTRPLTVDDAVQVALLNNKGLQARFFELGIGEAELVQASRLPNPGISFGR HHHHHHHHHHHHCCCCCCHHHEEEEECCCCCEEEHHHHCCCHHHHHHHHCCCCCCCCHHH LKRGDEIELERGYHLNLARLLAMPLVRQVEERRFAQTRGVVTLQLLSLASEARKAYFNAV CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AAEETVRYRRQVQQAAEAGAELARRMAEVGNFNKLQRLREQGFYADATLGMARAEHAALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SRERLTRLMGLWGPQTRFQLPERLPDLPEAPTDQPEIERAALAQRLDVQGAKLAAEQTAK HHHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH SLGLTRTTRFVNVLELGRAHNSSNEAPTQTGWELGLELPLFDWGGARVARAEAVYMQALS HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEECCCCCHHHHHHHHHHHHHH RAAETAVNARSEVREAYGAYRSAWDIARHHRDELVPLRQRIAEENVLRYNGMLIGVFELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AAARSQIAGVNACIESLRDFWLAQADLEMALIGKPGLSGAALALGSSPAAGDVGADH HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA