| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is speH [H]
Identifier: 124265451
GI number: 124265451
Start: 278925
End: 279302
Strand: Reverse
Name: speH [H]
Synonym: Mpe_A0258
Alternate gene names: 124265451
Gene position: 279302-278925 (Counterclockwise)
Preceding gene: 124265455
Following gene: 124265450
Centisome position: 6.91
GC content: 73.54
Gene sequence:
>378_bases ATGCAGGGTCTGCACCTCACCGCCGATTTGAGCGGCTGCCGCCGCGGCAGCCCGGCCCTGGTCGACGTGTCGGCGCTGCG CGCGCTGTGCCTGGGGGCCGTTCTCGACGCCGGCCTGCAGCCGGTCGGCGAGTGCTTCCATCCCTTCCCTTCCGAGGACG GCGAACCGCGCGGCGTCACCGGCGTGCTGCTGCTGGCCGAATCGCATCTCGCGGTGCACACGTGGCCCGAGCTGGACGCG GTGACGCTCGACGTGTATGCGTGCCACCGCCACGCCGACAACTCGGCGCGTGCCGAGGTCGTGATCGCGCGGCTGATCGA GGCCTTCGCGCCGGCGCGCGCCGAACGCCATGCGCTGCGCCGCGGGGCGGCCACATGA
Upstream 100 bases:
>100_bases GGCGGGCGTGCGGGATTCGAGGGCAGCCATGGTTTGCAGGGGAAAAGGGCGCCACGGAAGCGGCAGAATCGACGATTTTA CGAGCCCCGTCGCGCCACCC
Downstream 100 bases:
>100_bases ACGCGCCCGCATTGATCCTCGCCGCCGGCCGCGGCGAGCGCATGAGCCCGCTGACCGACCACACACCCAAGCCGCTGCTG CCGGTGCACGGCAAGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: AdoMetDC; SAMDC [H]
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MQGLHLTADLSGCRRGSPALVDVSALRALCLGAVLDAGLQPVGECFHPFPSEDGEPRGVTGVLLLAESHLAVHTWPELDA VTLDVYACHRHADNSARAEVVIARLIEAFAPARAERHALRRGAAT
Sequences:
>Translated_125_residues MQGLHLTADLSGCRRGSPALVDVSALRALCLGAVLDAGLQPVGECFHPFPSEDGEPRGVTGVLLLAESHLAVHTWPELDA VTLDVYACHRHADNSARAEVVIARLIEAFAPARAERHALRRGAAT >Mature_125_residues MQGLHLTADLSGCRRGSPALVDVSALRALCLGAVLDAGLQPVGECFHPFPSEDGEPRGVTGVLLLAESHLAVHTWPELDA VTLDVYACHRHADNSARAEVVIARLIEAFAPARAERHALRRGAAT
Specific function: Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine [H]
COG id: COG1586
COG function: function code E; S-adenosylmethionine decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003826 - InterPro: IPR016067 - InterPro: IPR017716 [H]
Pfam domain/function: PF02675 AdoMet_dc [H]
EC number: =4.1.1.50 [H]
Molecular weight: Translated: 13251; Mature: 13251
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLHLTADLSGCRRGSPALVDVSALRALCLGAVLDAGLQPVGECFHPFPSEDGEPRGVT CCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCE GVLLLAESHLAVHTWPELDAVTLDVYACHRHADNSARAEVVIARLIEAFAPARAERHALR EEEEEECCCEEEEECCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH RGAAT CCCCC >Mature Secondary Structure MQGLHLTADLSGCRRGSPALVDVSALRALCLGAVLDAGLQPVGECFHPFPSEDGEPRGVT CCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCE GVLLLAESHLAVHTWPELDAVTLDVYACHRHADNSARAEVVIARLIEAFAPARAERHALR EEEEEECCCEEEEECCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH RGAAT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]