| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265434
Identifier: 124265434
GI number: 124265434
Start: 256687
End: 257259
Strand: Reverse
Name: 124265434
Synonym: Mpe_A0241
Alternate gene names: NA
Gene position: 257259-256687 (Counterclockwise)
Preceding gene: 124265435
Following gene: 124265430
Centisome position: 6.36
GC content: 74.0
Gene sequence:
>573_bases GTGCGGCCGGGCAGCATCGCCTGGGCCCTGGTAGGGCTGCTGATGCTGTTGCCGGCGCTCGCGGTCTACCCGAGCCCCAC CGCCGAACCGGTGCTGAACTGGCAGCCGGCGCTGTGGCTCACCGAACCGTGGCGTGCCTGGAGCGCCGTCTGGGTGCACC TGAGCCGGCAACACCTGCTCGTCAACTTGGCCGGCGGGCTGTTGGTGGTCGCGCTCGGCGTCGCCGCCCGCGTCCCGATG CGCGCCGCCATCGCCTGGGCGACGGCGTGGCCATTGACGCAGCTCGGCCTGCTGCTGATGCCCGACCTGCTGCGCTATGC CGGCCTGTCGGGGGTATTGCACGCCGGGGTCGCCATCGTCGCAGTCGTGCTGCTGCGGCGCGCGGATGCGGCGTCGCGGC GGCTGGGGGGCGCCATCGTCGCCGTGCTGGCCGTCAAGCTGCTGAGCGAAACGCCGTGGCGCGGACCGCTCGCGCATCCC GAAGGCTGGGACATCGCGGTCGCGCCGCTCGCGCACAGCACCGGCGCGATCGCCGGGGCACTGCTCGCCAGGCTGCTGCT GCGCCGGCGTTGA
Upstream 100 bases:
>100_bases GAGGCGCCGACGCAGTTCGACGGCGAGGCCTTCGCCACCGAGCGAGCCGCGGTGCGCGCGCTCAGCCGTGCCGTCTTCGG CTGAGGGGCCGCGCAGCCTG
Downstream 100 bases:
>100_bases CGCCAGGGTTCAGTCGCGGATGCGGCGCACCAGCGCGGTGGTGGAGTAGCCAGGCAGGAACGGGATGGCGAGCGCGCCGC CGCCCCAGCTGCGCACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRPGSIAWALVGLLMLLPALAVYPSPTAEPVLNWQPALWLTEPWRAWSAVWVHLSRQHLLVNLAGGLLVVALGVAARVPM RAAIAWATAWPLTQLGLLLMPDLLRYAGLSGVLHAGVAIVAVVLLRRADAASRRLGGAIVAVLAVKLLSETPWRGPLAHP EGWDIAVAPLAHSTGAIAGALLARLLLRRR
Sequences:
>Translated_190_residues MRPGSIAWALVGLLMLLPALAVYPSPTAEPVLNWQPALWLTEPWRAWSAVWVHLSRQHLLVNLAGGLLVVALGVAARVPM RAAIAWATAWPLTQLGLLLMPDLLRYAGLSGVLHAGVAIVAVVLLRRADAASRRLGGAIVAVLAVKLLSETPWRGPLAHP EGWDIAVAPLAHSTGAIAGALLARLLLRRR >Mature_190_residues MRPGSIAWALVGLLMLLPALAVYPSPTAEPVLNWQPALWLTEPWRAWSAVWVHLSRQHLLVNLAGGLLVVALGVAARVPM RAAIAWATAWPLTQLGLLLMPDLLRYAGLSGVLHAGVAIVAVVLLRRADAASRRLGGAIVAVLAVKLLSETPWRGPLAHP EGWDIAVAPLAHSTGAIAGALLARLLLRRR
Specific function: Unknown
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20232; Mature: 20232
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGSIAWALVGLLMLLPALAVYPSPTAEPVLNWQPALWLTEPWRAWSAVWVHLSRQHLL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH VNLAGGLLVVALGVAARVPMRAAIAWATAWPLTQLGLLLMPDLLRYAGLSGVLHAGVAIV HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AVVLLRRADAASRRLGGAIVAVLAVKLLSETPWRGPLAHPEGWDIAVAPLAHSTGAIAGA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHH LLARLLLRRR HHHHHHHHCC >Mature Secondary Structure MRPGSIAWALVGLLMLLPALAVYPSPTAEPVLNWQPALWLTEPWRAWSAVWVHLSRQHLL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH VNLAGGLLVVALGVAARVPMRAAIAWATAWPLTQLGLLLMPDLLRYAGLSGVLHAGVAIV HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AVVLLRRADAASRRLGGAIVAVLAVKLLSETPWRGPLAHPEGWDIAVAPLAHSTGAIAGA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHH LLARLLLRRR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA