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The map label for this gene is yhbH [C]

Identifier: 124265419

GI number: 124265419

Start: 243102

End: 243446

Strand: Reverse

Name: yhbH [C]

Synonym: Mpe_A0226

Alternate gene names: 124265419

Gene position: 243446-243102 (Counterclockwise)

Preceding gene: 124265422

Following gene: 124265418

Centisome position: 6.02

GC content: 57.39

Gene sequence:

>345_bases
ATGAACCTGACGATCAGCGGACACCATCTCGAAGTGACGCCTTCTCTGCGTGAGTATGTACTTACAAAGCTAGATCGGGT
CACTCGACATTTCGATCAGGTCGTCGACATCAATGTCCTGCTGAGCGTCGAGAAGCAGAAGGAGAAGGAGAAGCGGCAGA
AGGCCGAGGTCAACGTGCACGTCAAGGGCAAGGACATCTTCGTCGAATCGGCCCACGAGGACCTGTACGCCGCCATCGAC
GAGCTGATGGACAAGCTCGACCGCCAAGTCTGCCGCCACAAGGACAAGGTGCAGGACCACCACCACGCCTCGGCCAAGCG
CCTCGATGCACCAGATCTGCAGTAA

Upstream 100 bases:

>100_bases
CCGCAGCGTCGGGCGCACACTGAACCGGACCGTCGGGGCATGGCATGTCGTGTCCCTGCGTCGCTGGTTTCCTTCTCAAC
CCTCAGTGAAAGGCGAACTT

Downstream 100 bases:

>100_bases
GCCCACCGCAAGGATCACGGACCATAAAGGAGCGGCCTGCGGGCCGCTTTGTTCTTGCCGATCGGACGGGAAGTCGTTGC
CGCACCGCAACCGCAGGCAC

Product: sigma 54 modulation protein / SSU ribosomal protein S30P

Products: NA

Alternate protein names: ORF130 [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNLTISGHHLEVTPSLREYVLTKLDRVTRHFDQVVDINVLLSVEKQKEKEKRQKAEVNVHVKGKDIFVESAHEDLYAAID
ELMDKLDRQVCRHKDKVQDHHHASAKRLDAPDLQ

Sequences:

>Translated_114_residues
MNLTISGHHLEVTPSLREYVLTKLDRVTRHFDQVVDINVLLSVEKQKEKEKRQKAEVNVHVKGKDIFVESAHEDLYAAID
ELMDKLDRQVCRHKDKVQDHHHASAKRLDAPDLQ
>Mature_114_residues
MNLTISGHHLEVTPSLREYVLTKLDRVTRHFDQVVDINVLLSVEKQKEKEKRQKAEVNVHVKGKDIFVESAHEDLYAAID
ELMDKLDRQVCRHKDKVQDHHHASAKRLDAPDLQ

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=100, Percent_Identity=39, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 13269; Mature: 13269

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTISGHHLEVTPSLREYVLTKLDRVTRHFDQVVDINVLLSVEKQKEKEKRQKAEVNVH
CCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHEEEE
VKGKDIFVESAHEDLYAAIDELMDKLDRQVCRHKDKVQDHHHASAKRLDAPDLQ
ECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNLTISGHHLEVTPSLREYVLTKLDRVTRHFDQVVDINVLLSVEKQKEKEKRQKAEVNVH
CCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHEEEE
VKGKDIFVESAHEDLYAAIDELMDKLDRQVCRHKDKVQDHHHASAKRLDAPDLQ
ECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1417413 [H]