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The map label for this gene is rnaSA [H]

Identifier: 124265399

GI number: 124265399

Start: 221656

End: 222072

Strand: Reverse

Name: rnaSA [H]

Synonym: Mpe_A0206

Alternate gene names: 124265399

Gene position: 222072-221656 (Counterclockwise)

Preceding gene: 124265400

Following gene: 124265398

Centisome position: 5.49

GC content: 66.43

Gene sequence:

>417_bases
GTGGTCTTCACCGGTCGGTCACACCGGGGATCTGCTTGGCGGCTGGTTGCCGTTGCCTTGCTTGCGGCAGCGTCGGTCGG
AGCGGCATCCATCGGATTCGTGACACAGGCGAAGGACTCGGCGCCGAGAGCGGTAGTGAGCTTGTCCTCACTACCTGTCG
AGGCGCAGACGGCCCAACGGCTGATCCACGCCGGCGGTCCCTTCCCGTACTCGAAAGACGGCATCGTGTTCGGCAACCGG
GAGCGTCTGCTCCCGCGCCATCCGCGCGGCTACTACCGCGAGTACACGGTGCAAACACCAGGGTCCCGCGATCGGGGGGC
CCGGAGGATCGTGTGCGGAGGCCAGCAAGCCACCGCGCCCGAAGCCTGCTACTACACCGACGATCATTACGCGAGCTTCC
GCCTCATCGCGCAGTGA

Upstream 100 bases:

>100_bases
ATCTTGATTTCCCCCTAGACGCTGCTGAAATTTGAGGCAGGCCCTTGAGGTATCGGCCCCAATTCAGTACCATCTGGGCT
TCGAATTTCAGGGATAACCC

Downstream 100 bases:

>100_bases
GCCCTACCACCAACAAGGAACGAGGGGGATTTCGACCATGATGCCTTTGCACACCGTCCGTCCCAACATCGTGCAGGCCA
TCCGCGCATTCCGCGTGGAA

Product: guanyl-specific ribonuclease Sa-like protein

Products: NA

Alternate protein names: RNase Sa [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MVFTGRSHRGSAWRLVAVALLAAASVGAASIGFVTQAKDSAPRAVVSLSSLPVEAQTAQRLIHAGGPFPYSKDGIVFGNR
ERLLPRHPRGYYREYTVQTPGSRDRGARRIVCGGQQATAPEACYYTDDHYASFRLIAQ

Sequences:

>Translated_138_residues
MVFTGRSHRGSAWRLVAVALLAAASVGAASIGFVTQAKDSAPRAVVSLSSLPVEAQTAQRLIHAGGPFPYSKDGIVFGNR
ERLLPRHPRGYYREYTVQTPGSRDRGARRIVCGGQQATAPEACYYTDDHYASFRLIAQ
>Mature_138_residues
MVFTGRSHRGSAWRLVAVALLAAASVGAASIGFVTQAKDSAPRAVVSLSSLPVEAQTAQRLIHAGGPFPYSKDGIVFGNR
ERLLPRHPRGYYREYTVQTPGSRDRGARRIVCGGQQATAPEACYYTDDHYASFRLIAQ

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 14951; Mature: 14951

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFTGRSHRGSAWRLVAVALLAAASVGAASIGFVTQAKDSAPRAVVSLSSLPVEAQTAQR
CEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEECCCCCCCHHHHHH
LIHAGGPFPYSKDGIVFGNRERLLPRHPRGYYREYTVQTPGSRDRGARRIVCGGQQATAP
HHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCC
EACYYTDDHYASFRLIAQ
CEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MVFTGRSHRGSAWRLVAVALLAAASVGAASIGFVTQAKDSAPRAVVSLSSLPVEAQTAQR
CEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEECCCCCCCHHHHHH
LIHAGGPFPYSKDGIVFGNRERLLPRHPRGYYREYTVQTPGSRDRGARRIVCGGQQATAP
HHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCC
EACYYTDDHYASFRLIAQ
CEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098582; 3118883; 1654932; 8396032; 9757110; 9819211; 11455593 [H]