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The map label for this gene is yiaD [C]

Identifier: 124265295

GI number: 124265295

Start: 102586

End: 103230

Strand: Direct

Name: yiaD [C]

Synonym: Mpe_A0102

Alternate gene names: 124265295

Gene position: 102586-103230 (Clockwise)

Preceding gene: 124265289

Following gene: 124265299

Centisome position: 2.54

GC content: 71.32

Gene sequence:

>645_bases
ATGCGCCGATGTAGCTTCGGCCGCGCAGCCCGTCAATCCTGCGAAGCCTCGGACCGGGGGCGGGCCTCGTGCGGCCCCCG
TCACCTTCGCTCCCTAGAATCGCGCTTCGCTCAACAACGGATCTGCCAAGGCAGCACGAACATGTTCGATCAAGAGGATG
AAGGCACGCGCATCGGCGTCTGGACGGCCCTGGCCGTGGTGTTCCTGGTGGTGGCCGGCCTGATCGGCGGCCTCGCGATC
CGGGCGATGAACGCCGCTGCGGGCGGTGATGGAGCGCAGGCCGTGGCGGGCACCGAGACGCTGGCCTTCGTCGACGGTCC
GCTCGAGGGCGAGGTGGTCGGTACGGTCTACTTCGCGGTCGGCCAGGCCGTGCTGCCGGACGGCGCGCTGGTGGCGCTGG
ACAAGGCGATCCAGGCCGTGAAGGACGCGCCTCAGCAGCGCGTCGTGCTGTCGGGCTTTCATGACGCCAGCGGTGCTGCG
GCTCTGAACGCCGAACTCGCCAAGGCGCGCGCGAAGGCCGTGCGTGCGGCGCTGGTGGCCGAGGGCGTGGACGCGGCGCG
CATCGCGCTGCGCAAGCCCGACGTGACGCTGGGCGACGGCGCCGCGCCGGAAGCGCGTCGCGTGGAGATCCGGCTGGTGG
AGTGA

Upstream 100 bases:

>100_bases
AAGCTGCGTTTGCCGTGGATGGGAATCGGGGCGGCGCGACCGCTCCTGGCGGTGGACTTGCGGGCCATGGTGTCTCCAGG
GAGCGCGTGAACCGCGCTTC

Downstream 100 bases:

>100_bases
TTCTCGCGAGACCCTCTCCCACGTGCGGGGGAGAGGGCGGGACACCGAGCGCTATTCGCCCAGCAGCGGCTGCAGGTAGC
GCCCGGTGTGGCTCGCCGGA

Product: outer membrane related peptidoglycan-associated lipoprotein

Products: ferricytochrome c; H2O

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRRCSFGRAARQSCEASDRGRASCGPRHLRSLESRFAQQRICQGSTNMFDQEDEGTRIGVWTALAVVFLVVAGLIGGLAI
RAMNAAAGGDGAQAVAGTETLAFVDGPLEGEVVGTVYFAVGQAVLPDGALVALDKAIQAVKDAPQQRVVLSGFHDASGAA
ALNAELAKARAKAVRAALVAEGVDAARIALRKPDVTLGDGAAPEARRVEIRLVE

Sequences:

>Translated_214_residues
MRRCSFGRAARQSCEASDRGRASCGPRHLRSLESRFAQQRICQGSTNMFDQEDEGTRIGVWTALAVVFLVVAGLIGGLAI
RAMNAAAGGDGAQAVAGTETLAFVDGPLEGEVVGTVYFAVGQAVLPDGALVALDKAIQAVKDAPQQRVVLSGFHDASGAA
ALNAELAKARAKAVRAALVAEGVDAARIALRKPDVTLGDGAAPEARRVEIRLVE
>Mature_214_residues
MRRCSFGRAARQSCEASDRGRASCGPRHLRSLESRFAQQRICQGSTNMFDQEDEGTRIGVWTALAVVFLVVAGLIGGLAI
RAMNAAAGGDGAQAVAGTETLAFVDGPLEGEVVGTVYFAVGQAVLPDGALVALDKAIQAVKDAPQQRVVLSGFHDASGAA
ALNAELAKARAKAVRAALVAEGVDAARIALRKPDVTLGDGAAPEARRVEIRLVE

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 22179; Mature: 22179

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRCSFGRAARQSCEASDRGRASCGPRHLRSLESRFAQQRICQGSTNMFDQEDEGTRIGV
CCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHH
WTALAVVFLVVAGLIGGLAIRAMNAAAGGDGAQAVAGTETLAFVDGPLEGEVVGTVYFAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCCCCHHHHHHHHHH
GQAVLPDGALVALDKAIQAVKDAPQQRVVLSGFHDASGAAALNAELAKARAKAVRAALVA
CHHHCCCCHHHHHHHHHHHHHCCCHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EGVDAARIALRKPDVTLGDGAAPEARRVEIRLVE
CCCCHHHHEEECCCCEECCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MRRCSFGRAARQSCEASDRGRASCGPRHLRSLESRFAQQRICQGSTNMFDQEDEGTRIGV
CCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHH
WTALAVVFLVVAGLIGGLAIRAMNAAAGGDGAQAVAGTETLAFVDGPLEGEVVGTVYFAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCCCCHHHHHHHHHH
GQAVLPDGALVALDKAIQAVKDAPQQRVVLSGFHDASGAAALNAELAKARAKAVRAALVA
CHHHCCCCHHHHHHHHHHHHHCCCHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EGVDAARIALRKPDVTLGDGAAPEARRVEIRLVE
CCCCHHHHEEECCCCEECCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA