| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265289
Identifier: 124265289
GI number: 124265289
Start: 91316
End: 91888
Strand: Direct
Name: 124265289
Synonym: Mpe_A0096
Alternate gene names: NA
Gene position: 91316-91888 (Clockwise)
Preceding gene: 124265288
Following gene: 124265295
Centisome position: 2.26
GC content: 73.12
Gene sequence:
>573_bases ATGGCCCTCCTGGCTGCTGCGTGGTGGTGGTGGGCCACGCCGAGCCGGCGGCCCCTGTTCGCGTGGCTGCTGCTGCTGGG CTCCGCAGCCTTCCTCACGCTGGTGACCAAGGTCGCGTTCATGGGATGGGGCCTCGGCATCGAGGCGCTCGACTTCACCG GCCTGTCGGGGCACTCGATGCTGGCCGCCGCGATCTACCCGGTGCTGGCGCGCACGCTGGCCAGCCCGGCCGCGGTGCCG CCGCGCTGGGCGATCGTCGCCGGCTATGCGCTGGCGGCGGTGATTTCGCTGTCGCGCGTCGTCATCGGCGCGCACTCGGT GTCGGAGGTCGTGCTGGGCTTTGCGGTGGGCGGGGCGGCGAGCGCGGTCGCGCTGATGCTCGAGACCCGTCATCCGCCGC CGCTGCCGAAGCACTGGCTGGTGGTCGGGCTGGCGGGCTGGCTGACGCTGATGCCCGTGGTCGCCGCGCCATCGGGAACG CATGGGATGGTGCAGCGGCTGGCCAAGGCGTTGTCGGATCGCGACGTGCTCTTCACGCGGGCCGATCTGCACCGCCTGCG GCCGCCCGGCTGA
Upstream 100 bases:
>100_bases CCGGCGACGCTCGATCGATCTCCCCACACGCCCGATGACATTCGCACACGCCTCCTGGCACTGGCTCACCCGATTCGGAG AATCCGGCATCGTGATCCCG
Downstream 100 bases:
>100_bases GCGGGCCGGGCCCCGGCCGTCAGCGCGGCGGCTGCAGTCCGCGCCGCGCCTGCAGCGCTCGTTCGCGCACGTGGCAGCCG TCGAGGTGGTCGTTGACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MALLAAAWWWWATPSRRPLFAWLLLLGSAAFLTLVTKVAFMGWGLGIEALDFTGLSGHSMLAAAIYPVLARTLASPAAVP PRWAIVAGYALAAVISLSRVVIGAHSVSEVVLGFAVGGAASAVALMLETRHPPPLPKHWLVVGLAGWLTLMPVVAAPSGT HGMVQRLAKALSDRDVLFTRADLHRLRPPG
Sequences:
>Translated_190_residues MALLAAAWWWWATPSRRPLFAWLLLLGSAAFLTLVTKVAFMGWGLGIEALDFTGLSGHSMLAAAIYPVLARTLASPAAVP PRWAIVAGYALAAVISLSRVVIGAHSVSEVVLGFAVGGAASAVALMLETRHPPPLPKHWLVVGLAGWLTLMPVVAAPSGT HGMVQRLAKALSDRDVLFTRADLHRLRPPG >Mature_189_residues ALLAAAWWWWATPSRRPLFAWLLLLGSAAFLTLVTKVAFMGWGLGIEALDFTGLSGHSMLAAAIYPVLARTLASPAAVPP RWAIVAGYALAAVISLSRVVIGAHSVSEVVLGFAVGGAASAVALMLETRHPPPLPKHWLVVGLAGWLTLMPVVAAPSGTH GMVQRLAKALSDRDVLFTRADLHRLRPPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 20080; Mature: 19949
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLAAAWWWWATPSRRPLFAWLLLLGSAAFLTLVTKVAFMGWGLGIEALDFTGLSGHSM CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCHHH LAAAIYPVLARTLASPAAVPPRWAIVAGYALAAVISLSRVVIGAHSVSEVVLGFAVGGAA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SAVALMLETRHPPPLPKHWLVVGLAGWLTLMPVVAAPSGTHGMVQRLAKALSDRDVLFTR HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEH ADLHRLRPPG HHHHHCCCCC >Mature Secondary Structure ALLAAAWWWWATPSRRPLFAWLLLLGSAAFLTLVTKVAFMGWGLGIEALDFTGLSGHSM CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCHHH LAAAIYPVLARTLASPAAVPPRWAIVAGYALAAVISLSRVVIGAHSVSEVVLGFAVGGAA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SAVALMLETRHPPPLPKHWLVVGLAGWLTLMPVVAAPSGTHGMVQRLAKALSDRDVLFTR HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEH ADLHRLRPPG HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]