| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yqjD [C]
Identifier: 124265208
GI number: 124265208
Start: 18282
End: 18611
Strand: Direct
Name: yqjD [C]
Synonym: Mpe_A0015
Alternate gene names: 124265208
Gene position: 18282-18611 (Clockwise)
Preceding gene: 124265207
Following gene: 124265210
Centisome position: 0.45
GC content: 73.03
Gene sequence:
>330_bases ATGGACTCGACCGCCACTTCCACCCCCGAGCACGCCACCCGCGAACGGCTCGCGCACGGCCTGCAGCAGATGGTCGACGA GGCCAATCACCTGCTGAAGGACGCGCAGCGTGCCGGCAGCGAGCAGATCGGCAGCACCCGCGAGAAGCTCGAGGCACAAC TGCGCCGCGCGCGCCGGGAGCTGGGCCGCCTGGAAGACGAGGCGCTGTACCGCGGCCGGCGCGCCGCCCGCAAGGCCGAC CACGCGGTGCATGAGCACCCGTACGTGGCGATCGGCGTGGCCGCCGGCGTGGGCCTGCTGGTCGGGTTGCTGATCGCGCG GCGCGATTAG
Upstream 100 bases:
>100_bases GTCAACGGGCGGCCTCGCCGGGCGCCTAGGATGGTCCTTCACCCATCCCGGGCGCCTGGCCCCGCGGCCTCGCGTCCATT CCCACGGCAAGGAGCACTGC
Downstream 100 bases:
>100_bases AGGCGGAGGCCTCAGCGCCGAGCGGGCGCGCGTGCCGGGGGCTTGCGACGCACCGGCGCAGCGGGCAGCATCACCACGCG GCGCAGCTTGCCGCTTGCGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRELGRLEDEALYRGRRAARKAD HAVHEHPYVAIGVAAGVGLLVGLLIARRD
Sequences:
>Translated_109_residues MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRELGRLEDEALYRGRRAARKAD HAVHEHPYVAIGVAAGVGLLVGLLIARRD >Mature_109_residues MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRELGRLEDEALYRGRRAARKAD HAVHEHPYVAIGVAAGVGLLVGLLIARRD
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12069; Mature: 12069
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHH LGRLEDEALYRGRRAARKADHAVHEHPYVAIGVAAGVGLLVGLLIARRD HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHH LGRLEDEALYRGRRAARKADHAVHEHPYVAIGVAAGVGLLVGLLIARRD HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA