Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yqjD [C]

Identifier: 124265208

GI number: 124265208

Start: 18282

End: 18611

Strand: Direct

Name: yqjD [C]

Synonym: Mpe_A0015

Alternate gene names: 124265208

Gene position: 18282-18611 (Clockwise)

Preceding gene: 124265207

Following gene: 124265210

Centisome position: 0.45

GC content: 73.03

Gene sequence:

>330_bases
ATGGACTCGACCGCCACTTCCACCCCCGAGCACGCCACCCGCGAACGGCTCGCGCACGGCCTGCAGCAGATGGTCGACGA
GGCCAATCACCTGCTGAAGGACGCGCAGCGTGCCGGCAGCGAGCAGATCGGCAGCACCCGCGAGAAGCTCGAGGCACAAC
TGCGCCGCGCGCGCCGGGAGCTGGGCCGCCTGGAAGACGAGGCGCTGTACCGCGGCCGGCGCGCCGCCCGCAAGGCCGAC
CACGCGGTGCATGAGCACCCGTACGTGGCGATCGGCGTGGCCGCCGGCGTGGGCCTGCTGGTCGGGTTGCTGATCGCGCG
GCGCGATTAG

Upstream 100 bases:

>100_bases
GTCAACGGGCGGCCTCGCCGGGCGCCTAGGATGGTCCTTCACCCATCCCGGGCGCCTGGCCCCGCGGCCTCGCGTCCATT
CCCACGGCAAGGAGCACTGC

Downstream 100 bases:

>100_bases
AGGCGGAGGCCTCAGCGCCGAGCGGGCGCGCGTGCCGGGGGCTTGCGACGCACCGGCGCAGCGGGCAGCATCACCACGCG
GCGCAGCTTGCCGCTTGCGC

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRELGRLEDEALYRGRRAARKAD
HAVHEHPYVAIGVAAGVGLLVGLLIARRD

Sequences:

>Translated_109_residues
MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRELGRLEDEALYRGRRAARKAD
HAVHEHPYVAIGVAAGVGLLVGLLIARRD
>Mature_109_residues
MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRELGRLEDEALYRGRRAARKAD
HAVHEHPYVAIGVAAGVGLLVGLLIARRD

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12069; Mature: 12069

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHH
LGRLEDEALYRGRRAARKADHAVHEHPYVAIGVAAGVGLLVGLLIARRD
HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSTATSTPEHATRERLAHGLQQMVDEANHLLKDAQRAGSEQIGSTREKLEAQLRRARRE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHH
LGRLEDEALYRGRRAARKADHAVHEHPYVAIGVAAGVGLLVGLLIARRD
HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA