| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265210
Identifier: 124265210
GI number: 124265210
Start: 20193
End: 21035
Strand: Direct
Name: 124265210
Synonym: Mpe_A0017
Alternate gene names: NA
Gene position: 20193-21035 (Clockwise)
Preceding gene: 124265208
Following gene: 124265211
Centisome position: 0.5
GC content: 72.6
Gene sequence:
>843_bases ATGAGCAACGACCTGACATCGATCCTGGTTCATCTGGACGACGATGCCGACGGTTGCGCGCGGCGGTTGCACACGGCGCA GCGCCTGGCCGCCGCGCAAGGGGCCCGGCTCGACACGCTGTACGCGGTGACGCCGTCGGTGCTGCAGAACCCGTATGCCT TCACCGTCGAGACCGGCGCAGCCTCGCTGCTGATCGGCGCCGAGGCCGCGCAGCGCGAACGCGCACGCAACGTGTTCGAA CAGGCCCGGACCCGAGCCGGCGGCCTGCCCGAGGTGAGCTGGCACGAGGCGCGCGGCGAACCGGTCGGCGCCTTCGTCCG CCGCGGCTGGGCGTCCGACCTGCTGGTGCTGGGTCAGCACGACCCCGACGCGGCCCCGAGCGGCGCACCGCCCGACTTCG CCACCTCGGTGCTGGTCGACAGCGGCAAGCCGGCGCTCGTGCTGCCGTACGTGGACACCGGTGCCGCGGTCGGCGACACC GTGCTCGTGGCGTGGAAGCCCACGCGCGAGTCGGCGCGCGCCGTCACCGCGGCGTTGCCGCTGCTGCGACGGGCACGGCA GGTGCACCTGATCGCTTGGGACGAGGCGGAAGACAGCGATACGCGCACGCCGCTGGAGATCGAAGCCTTCCTGCAGCACC ACGACATCACGGCCACGCTGCACCGAGGCGTGCGGCCGAGCGCCGGGCTGGGCGAAATGCTGCTGTCGCAGGCGGCCGAT CTGCAGGCCGACCTGCTGGTGATGGGCTGCTACGGTCACGGCCGCGCGCGGGAGTGGGTGCTGGGCGGCGTGACGCGCAC CGTGCTGCGCTCGATGACGCTGCCGGTGCTGATGGTGCACTGA
Upstream 100 bases:
>100_bases ATGGGCAGCCACTGCGGGCTCTGGTTGATGGACATCAAGCCGCGCAGGGACATCGTGGCCTACGGTGTCGATCAAGACAG CTGGCATGGGGAGCATGGCG
Downstream 100 bases:
>100_bases GCGTGCGCATCCGCGCGCCCCGTCGGCACCGCGCATGAGCGACCTGTTCGGACTCGACGCCTACGCGCCGAAGGAGATCG CCGCGCGCGTGAGCGAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Universal Stress Protein UspA; UspA Domain Protein; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGAASLLIGAEAAQRERARNVFE QARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQHDPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDT VLVAWKPTRESARAVTAALPLLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH
Sequences:
>Translated_280_residues MSNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGAASLLIGAEAAQRERARNVFE QARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQHDPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDT VLVAWKPTRESARAVTAALPLLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH >Mature_279_residues SNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGAASLLIGAEAAQRERARNVFEQ ARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQHDPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDTV LVAWKPTRESARAVTAALPLLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAADL QADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30036; Mature: 29905
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGA CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCEEEEEECCC ASLLIGAEAAQRERARNVFEQARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQH EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCCCEEEEECC DPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDTVLVAWKPTRESARAVTAALP CCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH LLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD HHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCC LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure SNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGA CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCEEEEEECCC ASLLIGAEAAQRERARNVFEQARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQH EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCCCEEEEECC DPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDTVLVAWKPTRESARAVTAALP CCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH LLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD HHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCC LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA