Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265210

Identifier: 124265210

GI number: 124265210

Start: 20193

End: 21035

Strand: Direct

Name: 124265210

Synonym: Mpe_A0017

Alternate gene names: NA

Gene position: 20193-21035 (Clockwise)

Preceding gene: 124265208

Following gene: 124265211

Centisome position: 0.5

GC content: 72.6

Gene sequence:

>843_bases
ATGAGCAACGACCTGACATCGATCCTGGTTCATCTGGACGACGATGCCGACGGTTGCGCGCGGCGGTTGCACACGGCGCA
GCGCCTGGCCGCCGCGCAAGGGGCCCGGCTCGACACGCTGTACGCGGTGACGCCGTCGGTGCTGCAGAACCCGTATGCCT
TCACCGTCGAGACCGGCGCAGCCTCGCTGCTGATCGGCGCCGAGGCCGCGCAGCGCGAACGCGCACGCAACGTGTTCGAA
CAGGCCCGGACCCGAGCCGGCGGCCTGCCCGAGGTGAGCTGGCACGAGGCGCGCGGCGAACCGGTCGGCGCCTTCGTCCG
CCGCGGCTGGGCGTCCGACCTGCTGGTGCTGGGTCAGCACGACCCCGACGCGGCCCCGAGCGGCGCACCGCCCGACTTCG
CCACCTCGGTGCTGGTCGACAGCGGCAAGCCGGCGCTCGTGCTGCCGTACGTGGACACCGGTGCCGCGGTCGGCGACACC
GTGCTCGTGGCGTGGAAGCCCACGCGCGAGTCGGCGCGCGCCGTCACCGCGGCGTTGCCGCTGCTGCGACGGGCACGGCA
GGTGCACCTGATCGCTTGGGACGAGGCGGAAGACAGCGATACGCGCACGCCGCTGGAGATCGAAGCCTTCCTGCAGCACC
ACGACATCACGGCCACGCTGCACCGAGGCGTGCGGCCGAGCGCCGGGCTGGGCGAAATGCTGCTGTCGCAGGCGGCCGAT
CTGCAGGCCGACCTGCTGGTGATGGGCTGCTACGGTCACGGCCGCGCGCGGGAGTGGGTGCTGGGCGGCGTGACGCGCAC
CGTGCTGCGCTCGATGACGCTGCCGGTGCTGATGGTGCACTGA

Upstream 100 bases:

>100_bases
ATGGGCAGCCACTGCGGGCTCTGGTTGATGGACATCAAGCCGCGCAGGGACATCGTGGCCTACGGTGTCGATCAAGACAG
CTGGCATGGGGAGCATGGCG

Downstream 100 bases:

>100_bases
GCGTGCGCATCCGCGCGCCCCGTCGGCACCGCGCATGAGCGACCTGTTCGGACTCGACGCCTACGCGCCGAAGGAGATCG
CCGCGCGCGTGAGCGAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Universal Stress Protein UspA; UspA Domain Protein; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGAASLLIGAEAAQRERARNVFE
QARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQHDPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDT
VLVAWKPTRESARAVTAALPLLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD
LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH

Sequences:

>Translated_280_residues
MSNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGAASLLIGAEAAQRERARNVFE
QARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQHDPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDT
VLVAWKPTRESARAVTAALPLLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD
LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH
>Mature_279_residues
SNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGAASLLIGAEAAQRERARNVFEQ
ARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQHDPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDTV
LVAWKPTRESARAVTAALPLLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAADL
QADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30036; Mature: 29905

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGA
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCEEEEEECCC
ASLLIGAEAAQRERARNVFEQARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQH
EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCCCEEEEECC
DPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDTVLVAWKPTRESARAVTAALP
CCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH
LLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD
HHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCC
LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
SNDLTSILVHLDDDADGCARRLHTAQRLAAAQGARLDTLYAVTPSVLQNPYAFTVETGA
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCEEEEEECCC
ASLLIGAEAAQRERARNVFEQARTRAGGLPEVSWHEARGEPVGAFVRRGWASDLLVLGQH
EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCCCEEEEECC
DPDAAPSGAPPDFATSVLVDSGKPALVLPYVDTGAAVGDTVLVAWKPTRESARAVTAALP
CCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH
LLRRARQVHLIAWDEAEDSDTRTPLEIEAFLQHHDITATLHRGVRPSAGLGEMLLSQAAD
HHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCC
LQADLLVMGCYGHGRAREWVLGGVTRTVLRSMTLPVLMVH
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA