| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024619
Identifier: 124024619
GI number: 124024619
Start: 2593856
End: 2594509
Strand: Reverse
Name: 124024619
Synonym: P9303_29311
Alternate gene names: NA
Gene position: 2594509-2593856 (Counterclockwise)
Preceding gene: 124024620
Following gene: 124024618
Centisome position: 96.71
GC content: 59.33
Gene sequence:
>654_bases ATGATGCGTGCCCTGCTTCTGCAGCTGTGGGGATGGATGGTGGTCTGGAGTGTTCATTCAGGCCGCCTCGATCTCCTTCT CGCAGGTGGCTTCCACAAACTTGTCAGTGCTTCAGGAGTGGCGCTGCTGATTGGGGGGGTGATGGTGGGGCTGAAAAGCC GCAAGCGGAAAGAATCAGTCTCATGGCCCTGGCTGGCCAGTGCTGGGATGGCAGTACTAGTGCTACTAGTGCCCCCGCAA CCTTCCTTCAGCGACCTGGCAGCCTCGCGCCCGCAAGGCCTACTTGAACCGCCGGATCTTGCTTTCGTGCTGCCGCCTCA ACAGCGCACGCTTACGGACTGGGTAAGGCTATTGCGCAGCCAGCCTGACCCTGATCTGGTGGATGGCAATCCTGTCAACA TCAGTGGATTTGTGCTCAAGAGAGGCGATCAGCCAGCCCAGATCGCACGCCTTAGGGTGCGCTGCTGTCTGGCGGATGCC ACCCCTGCAGGGTTACCGGTGTCCTGGCCAGTGGACGCTAAACCCAAGGCCAATCAGTGGCTCAAGATCGAAGGGCAGAT GAAGGTGGAAACACGTCAGGGCCAGAGAGTCGCCGTTGTGGTTCCCGAAACAATCACCCCGATTCAAAGGCCGAAACGAC CGCTGGAACCATGA
Upstream 100 bases:
>100_bases AGGCCAAAAGCAATTGGCATCACAGCAATCGTGGCCTGTCTAGGCGTGCTGCTCATCGGCCAGTGGGTCAATTTATGGCA ACTTTGAACAGGACAAAACA
Downstream 100 bases:
>100_bases AGCAAAAGATGTGGCTGCTGCTAACAAGCTTCGCGGCTCTGGTGCTGGTGCAACAGCAACTGCTGCTGCACCGTCCACCC CGATTGGTGTCACGCACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MMRALLLQLWGWMVVWSVHSGRLDLLLAGGFHKLVSASGVALLIGGVMVGLKSRKRKESVSWPWLASAGMAVLVLLVPPQ PSFSDLAASRPQGLLEPPDLAFVLPPQQRTLTDWVRLLRSQPDPDLVDGNPVNISGFVLKRGDQPAQIARLRVRCCLADA TPAGLPVSWPVDAKPKANQWLKIEGQMKVETRQGQRVAVVVPETITPIQRPKRPLEP
Sequences:
>Translated_217_residues MMRALLLQLWGWMVVWSVHSGRLDLLLAGGFHKLVSASGVALLIGGVMVGLKSRKRKESVSWPWLASAGMAVLVLLVPPQ PSFSDLAASRPQGLLEPPDLAFVLPPQQRTLTDWVRLLRSQPDPDLVDGNPVNISGFVLKRGDQPAQIARLRVRCCLADA TPAGLPVSWPVDAKPKANQWLKIEGQMKVETRQGQRVAVVVPETITPIQRPKRPLEP >Mature_217_residues MMRALLLQLWGWMVVWSVHSGRLDLLLAGGFHKLVSASGVALLIGGVMVGLKSRKRKESVSWPWLASAGMAVLVLLVPPQ PSFSDLAASRPQGLLEPPDLAFVLPPQQRTLTDWVRLLRSQPDPDLVDGNPVNISGFVLKRGDQPAQIARLRVRCCLADA TPAGLPVSWPVDAKPKANQWLKIEGQMKVETRQGQRVAVVVPETITPIQRPKRPLEP
Specific function: Unknown
COG id: COG3689
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23799; Mature: 23799
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRALLLQLWGWMVVWSVHSGRLDLLLAGGFHKLVSASGVALLIGGVMVGLKSRKRKESV CHHHHHHHHHHHHEEEEECCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC SWPWLASAGMAVLVLLVPPQPSFSDLAASRPQGLLEPPDLAFVLPPQQRTLTDWVRLLRS CCCHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHC QPDPDLVDGNPVNISGFVLKRGDQPAQIARLRVRCCLADATPAGLPVSWPVDAKPKANQW CCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCE LKIEGQMKVETRQGQRVAVVVPETITPIQRPKRPLEP EEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MMRALLLQLWGWMVVWSVHSGRLDLLLAGGFHKLVSASGVALLIGGVMVGLKSRKRKESV CHHHHHHHHHHHHEEEEECCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC SWPWLASAGMAVLVLLVPPQPSFSDLAASRPQGLLEPPDLAFVLPPQQRTLTDWVRLLRS CCCHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHC QPDPDLVDGNPVNISGFVLKRGDQPAQIARLRVRCCLADATPAGLPVSWPVDAKPKANQW CCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCE LKIEGQMKVETRQGQRVAVVVPETITPIQRPKRPLEP EEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA