| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124024618
Identifier: 124024618
GI number: 124024618
Start: 2592537
End: 2593859
Strand: Reverse
Name: 124024618
Synonym: P9303_29301
Alternate gene names: NA
Gene position: 2593859-2592537 (Counterclockwise)
Preceding gene: 124024619
Following gene: 124024615
Centisome position: 96.69
GC content: 55.63
Gene sequence:
>1323_bases ATGAAGCAAAAGATGTGGCTGCTGCTAACAAGCTTCGCGGCTCTGGTGCTGGTGCAACAGCAACTGCTGCTGCACCGTCC ACCCCGATTGGTGTCACGCACACCGCAGCCCCTCCAATCAGGTAGTGCTGCCCTTGACCTTCGCTTCAGTCGGCCGATGC AACTGGGGAGCGTGGCGGCAGATAGTCAACTGCAACCGGATCTACCTCACCGTTGGCAGGGGGAGAACAATCTTCTGCGT CTGTTGATTGATGCCAATCAGAGCATCAAGACTTCAATTCAGCTGACGGTGGCTGGACAGGATCATCGAGCCCAAGCTCT ACCTCCCCAACACTGGTGGTGGGATCCGAGACCCTGGCTGTTAGTGAATCGCCCGGTGGATGGCGGAGACCAACTGCAAG TCCAGAGACGCGATGGGCGCTGGATACCCCTGAGCCCCACGTTGAATGAGATCAAAAGCGTTGTTCCCCTTGGCAATGGC AAGGGAGCTGCCTTGATCGAAAAGGATAAGGACTGGAAGCAGCGAGTCTTTTTGCTGCCTTTGTTGCCACGCAATATCAC GGCTCATCGCGATCAGCTCGCCGCTCCAAAGGCAGGGAAATTGATGCCATTAGTGCCAGGGCAATATCTTTTTGCTGATC TCAGCAGCAACCTGAACGGTGACCTGCTTGCGCAAACAGGAGGATTCTCTCCAGGAAGTGGACGCACTGAACTGATCAAA GCGGATGGCCAGAGAAGAACCCTTGAGATCAAAGCCTCTGGACCGATCCAGCTGCTGCCGGCCGGTGGTGGAGCGGTTGT GCCCACCTTCAACGGGCTGACACTGCGTCCACTAATTGAAAACTACAAGACTCCCCAAATCCTCCCCGGAGCAAGGGATC TTGGAGATTTTTGCCAGGCTACGGGAAGGGCAGTGCTCATTCGCCATTGGCCGGACTATCGCCGTTCGATCGAGTTGGTG ATTCCAGGATTGCCTCCTAAGCAGCTCTGGCTTGGCGAAGAGTCAGTGCTGACCTTGAGTTGTGATAACAGGGGCGAACG TGTTTGGGCGGTTCTTGGTCGCAGGCAGGATCGCCGCATCAAACATGAGCTTGTTTTGCTGGATGGTGGCGGCGTTGTAC TGAGCCGCCGCCAACTAGCACCATGGCTTTTTAAGTCAGGCTCAAGGCTGCAGTTTGACCCTGTGGGCGAACAGTTGTTG ATGACTGTCACCAAGCCAGGATTGGATGCAGGCCGAGCGGCTCTGATGGATGCCACCACGCTTGAATGGCTCAAGGTATT GCCAATACGAATTAAGGAGGCACTTTGGTTGTCCGCAGGGTGA
Upstream 100 bases:
>100_bases AAGGGCAGATGAAGGTGGAAACACGTCAGGGCCAGAGAGTCGCCGTTGTGGTTCCCGAAACAATCACCCCGATTCAAAGG CCGAAACGACCGCTGGAACC
Downstream 100 bases:
>100_bases TCTATCGCTGTTTGCTTAGAAGCTGAATGTGACGCCGGTGCCGACGTGGTGCTGCCAGCCTTCACCCCAGCCTGAGCCTC CTTCTGAACTGTAGGTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKQKMWLLLTSFAALVLVQQQLLLHRPPRLVSRTPQPLQSGSAALDLRFSRPMQLGSVAADSQLQPDLPHRWQGENNLLR LLIDANQSIKTSIQLTVAGQDHRAQALPPQHWWWDPRPWLLVNRPVDGGDQLQVQRRDGRWIPLSPTLNEIKSVVPLGNG KGAALIEKDKDWKQRVFLLPLLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFSPGSGRTELIK ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQILPGARDLGDFCQATGRAVLIRHWPDYRRSIELV IPGLPPKQLWLGEESVLTLSCDNRGERVWAVLGRRQDRRIKHELVLLDGGGVVLSRRQLAPWLFKSGSRLQFDPVGEQLL MTVTKPGLDAGRAALMDATTLEWLKVLPIRIKEALWLSAG
Sequences:
>Translated_440_residues MKQKMWLLLTSFAALVLVQQQLLLHRPPRLVSRTPQPLQSGSAALDLRFSRPMQLGSVAADSQLQPDLPHRWQGENNLLR LLIDANQSIKTSIQLTVAGQDHRAQALPPQHWWWDPRPWLLVNRPVDGGDQLQVQRRDGRWIPLSPTLNEIKSVVPLGNG KGAALIEKDKDWKQRVFLLPLLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFSPGSGRTELIK ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQILPGARDLGDFCQATGRAVLIRHWPDYRRSIELV IPGLPPKQLWLGEESVLTLSCDNRGERVWAVLGRRQDRRIKHELVLLDGGGVVLSRRQLAPWLFKSGSRLQFDPVGEQLL MTVTKPGLDAGRAALMDATTLEWLKVLPIRIKEALWLSAG >Mature_440_residues MKQKMWLLLTSFAALVLVQQQLLLHRPPRLVSRTPQPLQSGSAALDLRFSRPMQLGSVAADSQLQPDLPHRWQGENNLLR LLIDANQSIKTSIQLTVAGQDHRAQALPPQHWWWDPRPWLLVNRPVDGGDQLQVQRRDGRWIPLSPTLNEIKSVVPLGNG KGAALIEKDKDWKQRVFLLPLLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFSPGSGRTELIK ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQILPGARDLGDFCQATGRAVLIRHWPDYRRSIELV IPGLPPKQLWLGEESVLTLSCDNRGERVWAVLGRRQDRRIKHELVLLDGGGVVLSRRQLAPWLFKSGSRLQFDPVGEQLL MTVTKPGLDAGRAALMDATTLEWLKVLPIRIKEALWLSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48874; Mature: 48874
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKMWLLLTSFAALVLVQQQLLLHRPPRLVSRTPQPLQSGSAALDLRFSRPMQLGSVAA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCEEEEEEECCCCCCCCCCC DSQLQPDLPHRWQGENNLLRLLIDANQSIKTSIQLTVAGQDHRAQALPPQHWWWDPRPWL CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEE LVNRPVDGGDQLQVQRRDGRWIPLSPTLNEIKSVVPLGNGKGAALIEKDKDWKQRVFLLP EEECCCCCCCEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEE LLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFSPGSGRTELIK CCCCCCCCCHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEEEEE ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQILPGARDLGDFCQA CCCCEEEEEEEECCCEEEEECCCCEEEECCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHH TGRAVLIRHWPDYRRSIELVIPGLPPKQLWLGEESVLTLSCDNRGERVWAVLGRRQDRRI CCCEEEEEECCCCCCEEEEEECCCCHHHEECCCCCEEEEECCCCCCEEEEECCCCCCCCC KHELVLLDGGGVVLSRRQLAPWLFKSGSRLQFDPVGEQLLMTVTKPGLDAGRAALMDATT EEEEEEEECCCEEEECHHCCHHHHCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHH LEWLKVLPIRIKEALWLSAG HHHHHHHHHHEEEEEEECCC >Mature Secondary Structure MKQKMWLLLTSFAALVLVQQQLLLHRPPRLVSRTPQPLQSGSAALDLRFSRPMQLGSVAA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCEEEEEEECCCCCCCCCCC DSQLQPDLPHRWQGENNLLRLLIDANQSIKTSIQLTVAGQDHRAQALPPQHWWWDPRPWL CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEE LVNRPVDGGDQLQVQRRDGRWIPLSPTLNEIKSVVPLGNGKGAALIEKDKDWKQRVFLLP EEECCCCCCCEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEE LLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFSPGSGRTELIK CCCCCCCCCHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEEEEE ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQILPGARDLGDFCQA CCCCEEEEEEEECCCEEEEECCCCEEEECCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHH TGRAVLIRHWPDYRRSIELVIPGLPPKQLWLGEESVLTLSCDNRGERVWAVLGRRQDRRI CCCEEEEEECCCCCCEEEEEECCCCHHHEECCCCCEEEEECCCCCCEEEEECCCCCCCCC KHELVLLDGGGVVLSRRQLAPWLFKSGSRLQFDPVGEQLLMTVTKPGLDAGRAALMDATT EEEEEEEECCCEEEECHHCCHHHHCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHH LEWLKVLPIRIKEALWLSAG HHHHHHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA