| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024582
Identifier: 124024582
GI number: 124024582
Start: 2559514
End: 2560266
Strand: Reverse
Name: 124024582
Synonym: P9303_28941
Alternate gene names: NA
Gene position: 2560266-2559514 (Counterclockwise)
Preceding gene: 124024590
Following gene: 124024580
Centisome position: 95.44
GC content: 54.18
Gene sequence:
>753_bases GTGACTAAGCCTGATGTTGAATCTGATTCAGCGGCCAGGGGCTACCGGGAGCGTTTGGATGATGGGCGGCGGGCCATGGC TCATCTCATTCATGTCTGGCATGAGCGCAATGGTTGGTCACATAAGGTCTTGCCCGCTTTGGCTGAATGCCTGGATCTCG GCCGGGTGCACAATTCTCAGATCTCTAATCTGCGCAACGGCAAACTCGCTTCACCAGGCCCCGAAGTGTTTCTGGCATTG GGACAAGCCAATGCCATCCTTCATGCCGGCCTAGAGCCGATTCGTGATCGCTTGGTCGAGGGGCATCCCGACTTACTCAA GGTGCTTTCGGAAAGTTCTCTTCCTCTGGAAGGAGAAGATGGTGAACCACTCGGAGCTGGCGCTCTGTTTGAGATTTTTG TGGGTCTTGCTGCCTTGCCTGCGGGCTTTGATTGGCGAATTGAAGAAGATGAGGCCGCAGCTCTTAGTGCTGCTTTGGCT GATTGTCTATGCAATGGAAAATCTTGGCGTCATTGCCGGGACAAGGTGATGGAGGCTTATCCAGTCACTAAGGCGCAGCG CAGAGAACGTTTTGCGGAGGTGATGGCTGGTTTGAGGGATTACAACTCTGAGGAGCTCGATGGCGAATTGCTTGATCTGC ACGCAACTCAGGTGGCCTTGGGTGGAGTGAACAGACAGGGAGCAGAGGGGTTTTTGGATGATCTAAGGGCCCGCTCAGAG TTGTTGGTTGATCAGGAAGCCCCGGAAACATAG
Upstream 100 bases:
>100_bases CTACCGGTCTGCTTATCGTTGAAGGCGTTGGTATCACTCTGGAGGCCATGAGCGATCTATCGAATGAGCGTAAACTATAC ACGATACGGATCCTTATCCA
Downstream 100 bases:
>100_bases CGGGCTTGCTGGACTCGACGAGCCAGGCCAAGACGACGCAACGCCTTCACGTGTTGCCAGGTGATGTCGAATTCAAACCA TCGCAGGCCATGACGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTKPDVESDSAARGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQISNLRNGKLASPGPEVFLAL GQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGEDGEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALA DCLCNGKSWRHCRDKVMEAYPVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE LLVDQEAPET
Sequences:
>Translated_250_residues MTKPDVESDSAARGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQISNLRNGKLASPGPEVFLAL GQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGEDGEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALA DCLCNGKSWRHCRDKVMEAYPVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE LLVDQEAPET >Mature_249_residues TKPDVESDSAARGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQISNLRNGKLASPGPEVFLALG QANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGEDGEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALAD CLCNGKSWRHCRDKVMEAYPVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSEL LVDQEAPET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27400; Mature: 27269
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPDVESDSAARGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ISNLRNGKLASPGPEVFLALGQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGED HHHCCCCCCCCCCHHHEEEECCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC GEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALADCLCNGKSWRHCRDKVMEAY CCCCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC PVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE CCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LLVDQEAPET HHHCCCCCCC >Mature Secondary Structure TKPDVESDSAARGYRERLDDGRRAMAHLIHVWHERNGWSHKVLPALAECLDLGRVHNSQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ISNLRNGKLASPGPEVFLALGQANAILHAGLEPIRDRLVEGHPDLLKVLSESSLPLEGED HHHCCCCCCCCCCHHHEEEECCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC GEPLGAGALFEIFVGLAALPAGFDWRIEEDEAAALSAALADCLCNGKSWRHCRDKVMEAY CCCCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC PVTKAQRRERFAEVMAGLRDYNSEELDGELLDLHATQVALGGVNRQGAEGFLDDLRARSE CCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LLVDQEAPET HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA