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The map label for this gene is ynbB [H]

Identifier: 124024580

GI number: 124024580

Start: 2557021

End: 2558322

Strand: Reverse

Name: ynbB [H]

Synonym: P9303_28921

Alternate gene names: 124024580

Gene position: 2558322-2557021 (Counterclockwise)

Preceding gene: 124024582

Following gene: 124024579

Centisome position: 95.36

GC content: 55.68

Gene sequence:

>1302_bases
TTGAAGACATTCCCCGCAGCTGGCTTTGATGAAGTGCTGGTGCAGGCGTGGGCCCGGCGGCACGTCGGTTTTGTCTCTAA
GCGTCTTGAGGGGATCGCAAGCGAGCGGACGGCTGCCGTAGCGGTTCGCCTTGCGAAGGTTTTGGAGGCTTTCAGCAGCG
AACGAGTCGCCACGCAACACTTTGCTTCCCTCACCGGTTATGGCCATGGAGATCAGGCCCGGGAGGTGGTTGATCGTGTA
TTTGCAAGGGTGCTTGGTGCTGAGAAAGCAGCTGTTCGACTCCAGTTTGTGAGTGGCACCCATGCAATTGCGACTGCGTT
GTTTGGCGTGCTTCGCCCTGGTGACCGACTCTTGTCAGTGACCGGAGAGCCTTACGACACACTTGAAGAAGTGATTGGTC
TGCGTGGATCCGGCCAGGGATCCTTAACCGAATTAGGGATCTCTTATGACCAGCTGCCCCTCACGACCGAGGGATGTGTG
GATGTCTCAGCCTTGGAACGCGCCTTGAAGGTGCCAACAAGGATGGTGTTGATACAGCGCAGCTGTGGCTACAGCTCGCG
GTCATCTCTTTCGATGAAAGCCATTGGCGAGTTGTGTCATCGCATCCATAACTCTCAGCCTGGGTGTGTCTGTTTTGTCG
ACAATTGCTATGGCGAGCTTGTTGAGGATTTGGAGCCCCCAGCAGTTGGTGCTGATCTGATTGCGGGCTCTTTGATCAAA
AATCTCGGTGGCACGATTGCTCCAACTGGTGGATATGTCGCCGGTCGGGCTGATTTGGTGGAGCAGGCTTGCTGCCGGCT
CACTGCCCCAGGGATTGGTAGTCAGGGGGGCACTGGCTTTGATCTTTATCGGTTGGTGTTGCAGGGGCTGTTCTTGGCTC
CACAAATGGTGGCAGAGGCATTGATCGGAGCTGATTTGGTCGCGGGTGTGTTCGACACTTTGGGCTTTGCAGTGAAGCCC
TCGATGGGAGCCTTTCGTAGCGATTTAATTCAGGCGGTGCAGCTTGGAGACCCTGAGGTTTTGAAAGTTGTTTGTAGGGC
CTTTCAGGCATGTTCACCTGTTGGGGCCTATCTCGATCCTGTGCCGGCTGCGATGCCTGGGTATGCAAGCGATTTGGTGA
TGGCGGGCGGAACATTTATTGATGGCAGCACCAGTGAGTTTTCTGCAGATGCTCCCTTGCGCCCCCCTTACAACCTCTAT
GTGCAGGGAGGCACCCATCGCACTCATGTGGAATTGGCACTGATCCGAGCTTTGGTTGCTTTGGTTCGCGCTGGTTTGCT
GGATGTACCCCAGACTGGGTGA

Upstream 100 bases:

>100_bases
TGATTTTGGCAATCTTGCGCTCTCGTTCTTCACTTTCGATTTCGTTTGACGTTCAACGAGGATTCAGCATGGCGATGGTT
GATTCTGACCCCGGGTTGTT

Downstream 100 bases:

>100_bases
GCTTTGCCTCGCCAGGCTCGATGGCTTTCCAATTCCCCGACCACTTTCGGTTTGCCGATACCCATGAATACGCCAGTTTG
GATGGTGATTTGGTGCGGGT

Product: cystathionine beta-lyase family aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKTFPAAGFDEVLVQAWARRHVGFVSKRLEGIASERTAAVAVRLAKVLEAFSSERVATQHFASLTGYGHGDQAREVVDRV
FARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLLSVTGEPYDTLEEVIGLRGSGQGSLTELGISYDQLPLTTEGCV
DVSALERALKVPTRMVLIQRSCGYSSRSSLSMKAIGELCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEALIGADLVAGVFDTLGFAVKP
SMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPVGAYLDPVPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLY
VQGGTHRTHVELALIRALVALVRAGLLDVPQTG

Sequences:

>Translated_433_residues
MKTFPAAGFDEVLVQAWARRHVGFVSKRLEGIASERTAAVAVRLAKVLEAFSSERVATQHFASLTGYGHGDQAREVVDRV
FARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLLSVTGEPYDTLEEVIGLRGSGQGSLTELGISYDQLPLTTEGCV
DVSALERALKVPTRMVLIQRSCGYSSRSSLSMKAIGELCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEALIGADLVAGVFDTLGFAVKP
SMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPVGAYLDPVPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLY
VQGGTHRTHVELALIRALVALVRAGLLDVPQTG
>Mature_433_residues
MKTFPAAGFDEVLVQAWARRHVGFVSKRLEGIASERTAAVAVRLAKVLEAFSSERVATQHFASLTGYGHGDQAREVVDRV
FARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLLSVTGEPYDTLEEVIGLRGSGQGSLTELGISYDQLPLTTEGCV
DVSALERALKVPTRMVLIQRSCGYSSRSSLSMKAIGELCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEALIGADLVAGVFDTLGFAVKP
SMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPVGAYLDPVPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLY
VQGGTHRTHVELALIRALVALVRAGLLDVPQTG

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 45578; Mature: 45578

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFPAAGFDEVLVQAWARRHVGFVSKRLEGIASERTAAVAVRLAKVLEAFSSERVATQH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FASLTGYGHGDQAREVVDRVFARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLLSV
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHHHHCCCCCEEEE
TGEPYDTLEEVIGLRGSGQGSLTELGISYDQLPLTTEGCVDVSALERALKVPTRMVLIQR
CCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHEEH
SCGYSSRSSLSMKAIGELCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
HCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHH
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEA
HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIGADLVAGVFDTLGFAVKPSMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPVGAYLDP
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCC
VPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLYVQGGTHRTHVELALIRALVA
CCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
LVRAGLLDVPQTG
HHHHCCCCCCCCC
>Mature Secondary Structure
MKTFPAAGFDEVLVQAWARRHVGFVSKRLEGIASERTAAVAVRLAKVLEAFSSERVATQH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FASLTGYGHGDQAREVVDRVFARVLGAEKAAVRLQFVSGTHAIATALFGVLRPGDRLLSV
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHHHHCCCCCEEEE
TGEPYDTLEEVIGLRGSGQGSLTELGISYDQLPLTTEGCVDVSALERALKVPTRMVLIQR
CCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHEEH
SCGYSSRSSLSMKAIGELCHRIHNSQPGCVCFVDNCYGELVEDLEPPAVGADLIAGSLIK
HCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHH
NLGGTIAPTGGYVAGRADLVEQACCRLTAPGIGSQGGTGFDLYRLVLQGLFLAPQMVAEA
HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIGADLVAGVFDTLGFAVKPSMGAFRSDLIQAVQLGDPEVLKVVCRAFQACSPVGAYLDP
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCC
VPAAMPGYASDLVMAGGTFIDGSTSEFSADAPLRPPYNLYVQGGTHRTHVELALIRALVA
CCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
LVRAGLLDVPQTG
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]