| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024553
Identifier: 124024553
GI number: 124024553
Start: 2534844
End: 2535704
Strand: Reverse
Name: 124024553
Synonym: P9303_28651
Alternate gene names: NA
Gene position: 2535704-2534844 (Counterclockwise)
Preceding gene: 124024554
Following gene: 124024552
Centisome position: 94.52
GC content: 51.45
Gene sequence:
>861_bases GTGAACTGGCAACCTCCCGTCTATCGCAGCCTCATCGGTGCAAGTCATCGGCGCAAAGGCGTTGTGTGTCAGGACTATTC CTTAAGCGCCAGTTTTCGCAGCAGAAGTGGAGTTCCAATCAAGTTGATGGTTGTGGCCGATGGCCATGGCGGTACTCGTT ATTGGCGCAGCGATGTGGGCAGCAAACTTGCGTGTGAAATTGCCCTTCAGCAAGCTCGAAAAGATGTAGGCAGGAGACTT CTTAGTTGGTCAGCTCCTTCAAGGTCGACGTTATCTGAATGGCATCAATGGCTCAAGCGTGAACTCCCGGGCAAGATCAT GCAGAACTGGCGCTTCGCTGTAGCCAATGATTGGCGGAGGTTAGATAAAACTCCAGAACAGGAAGCAGAAGGCTTTTCTC TCTACACATACGGCAGTACGCTTGGCTTGGTGATCCTCATGCCTCATTGGTGGGGCTGCACAGGCATCGGTGATTGGGAT CTAGTGCGCGTAGGAGCCAATAAGGGTTCAGGGTCAAGCACCGCAGAGCTAATCAACAGTGAAGACTCCCTTGGAATCAA AGGGGAATCGACCTTCAGTCTTTGCAAAAGTGATGCTTTATTGCACTTCACTGAACGCAGCTGTGTTCAAAGAATTGACC GCAAGGAACTTCCATACGCTTTGATGCTCAGCACTGATGGCATCCGTAAATCCTGCACTACGGATACTGATTTTCTAGCT TTGGCGGACTACCTAGTCAGCGAGGTGCCTGCTACAGGGGCTGATGGTGAATGCATTGCTCTTGATGAAGGGCTCAATCG CATCACGACAGAGGGAAGCGGCGATGACGTGAGCGTGGCGATCGATATCCTTGGACAATGA
Upstream 100 bases:
>100_bases TGAGTCGAACGCAAGGATCAGCAAGTGAAGGCAATATCCCTCTGCCTGATTTACCTCCAACCTTGATTGAACCCATTGAC GGTGTAGGGCCTGTGGTTTG
Downstream 100 bases:
>100_bases GCACTAGAGAATGAGGGACTACTAGATGAAAGCTAAGGGTGCTCTTACGGCTGCTGCCCTGTCTTTGCTGCCACTAGGGC AACCACTGCTACTAGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNWQPPVYRSLIGASHRRKGVVCQDYSLSASFRSRSGVPIKLMVVADGHGGTRYWRSDVGSKLACEIALQQARKDVGRRL LSWSAPSRSTLSEWHQWLKRELPGKIMQNWRFAVANDWRRLDKTPEQEAEGFSLYTYGSTLGLVILMPHWWGCTGIGDWD LVRVGANKGSGSSTAELINSEDSLGIKGESTFSLCKSDALLHFTERSCVQRIDRKELPYALMLSTDGIRKSCTTDTDFLA LADYLVSEVPATGADGECIALDEGLNRITTEGSGDDVSVAIDILGQ
Sequences:
>Translated_286_residues MNWQPPVYRSLIGASHRRKGVVCQDYSLSASFRSRSGVPIKLMVVADGHGGTRYWRSDVGSKLACEIALQQARKDVGRRL LSWSAPSRSTLSEWHQWLKRELPGKIMQNWRFAVANDWRRLDKTPEQEAEGFSLYTYGSTLGLVILMPHWWGCTGIGDWD LVRVGANKGSGSSTAELINSEDSLGIKGESTFSLCKSDALLHFTERSCVQRIDRKELPYALMLSTDGIRKSCTTDTDFLA LADYLVSEVPATGADGECIALDEGLNRITTEGSGDDVSVAIDILGQ >Mature_286_residues MNWQPPVYRSLIGASHRRKGVVCQDYSLSASFRSRSGVPIKLMVVADGHGGTRYWRSDVGSKLACEIALQQARKDVGRRL LSWSAPSRSTLSEWHQWLKRELPGKIMQNWRFAVANDWRRLDKTPEQEAEGFSLYTYGSTLGLVILMPHWWGCTGIGDWD LVRVGANKGSGSSTAELINSEDSLGIKGESTFSLCKSDALLHFTERSCVQRIDRKELPYALMLSTDGIRKSCTTDTDFLA LADYLVSEVPATGADGECIALDEGLNRITTEGSGDDVSVAIDILGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31594; Mature: 31594
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWQPPVYRSLIGASHRRKGVVCQDYSLSASFRSRSGVPIKLMVVADGHGGTRYWRSDVG CCCCCHHHHHHHCCCCCCCCCEEECCCCCCCHHCCCCCCEEEEEEECCCCCCHHHHHHCC SKLACEIALQQARKDVGRRLLSWSAPSRSTLSEWHQWLKRELPGKIMQNWRFAVANDWRR CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHH LDKTPEQEAEGFSLYTYGSTLGLVILMPHWWGCTGIGDWDLVRVGANKGSGSSTAELINS HCCCCCHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCC EDSLGIKGESTFSLCKSDALLHFTERSCVQRIDRKELPYALMLSTDGIRKSCTTDTDFLA CCCCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHH LADYLVSEVPATGADGECIALDEGLNRITTEGSGDDVSVAIDILGQ HHHHHHHHCCCCCCCCCEEEECCCCHHEECCCCCCCEEEEEEEECC >Mature Secondary Structure MNWQPPVYRSLIGASHRRKGVVCQDYSLSASFRSRSGVPIKLMVVADGHGGTRYWRSDVG CCCCCHHHHHHHCCCCCCCCCEEECCCCCCCHHCCCCCCEEEEEEECCCCCCHHHHHHCC SKLACEIALQQARKDVGRRLLSWSAPSRSTLSEWHQWLKRELPGKIMQNWRFAVANDWRR CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHH LDKTPEQEAEGFSLYTYGSTLGLVILMPHWWGCTGIGDWDLVRVGANKGSGSSTAELINS HCCCCCHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCC EDSLGIKGESTFSLCKSDALLHFTERSCVQRIDRKELPYALMLSTDGIRKSCTTDTDFLA CCCCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHH LADYLVSEVPATGADGECIALDEGLNRITTEGSGDDVSVAIDILGQ HHHHHHHHCCCCCCCCCEEEECCCCHHEECCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA