| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024554
Identifier: 124024554
GI number: 124024554
Start: 2535701
End: 2536459
Strand: Reverse
Name: 124024554
Synonym: P9303_28661
Alternate gene names: NA
Gene position: 2536459-2535701 (Counterclockwise)
Preceding gene: 124024555
Following gene: 124024553
Centisome position: 94.55
GC content: 52.57
Gene sequence:
>759_bases ATGCCTTTCCCCAACGTTCGCCTCACCAATCGCCCGCTGCATTTCATCTACATCTGCGATTGCTCTGGCTCAATGGCGGC GCAAGGGAAGATGCAGGCCCTGAATCAGGCCATCCGTCAGTCCTTGCCAGGCATGGTGAAGGTGGCGCGTGACAACCCAG AAGCAAGAGTGTTGGTGCGCGCGGTCAGCTTTGCTGATAAAGCCAGTTGGCATATCTCAAAACCCACAGAAGTAGAGCAA CTGCAATGGGTTGATCTTCAAGCTGGTGGAATTACAGCCATGGGTGAAGCGCTTGAACTGATCGCAACTCAGCTCTGTAG TCCGCCGATGGAAGAGAGAGCCTTACCACCAGTGTTGGTGTTGATCTCAGACGGTCAGCCCACTGATGATTTCGATGCTG GGCTCAAAGAGTTGATGAATCAGATGTGGGCACAAAAAGCCGTGCGTTTGGCCATTGCTCTAGGTCATGACGCGAACATG GATGTTCTGCAGGATTTCATTGGTCCTGATCTTGAAGGCGGCAGCCAGATCGGAGGCTCAATGCATGGAGTAAGCACCTC AGCAAGACAACCATTGCAAGCAAGTAATGCAACAGCATTAGCGCAGTACATCGAGTGGGCATCTACTGCCGTTGTTGGTG CTGCATCGATGCCGGTGAGTCGAACGCAAGGATCAGCAAGTGAAGGCAATATCCCTCTGCCTGATTTACCTCCAACCTTG ATTGAACCCATTGACGGTGTAGGGCCTGTGGTTTGGTGA
Upstream 100 bases:
>100_bases TCACACCAATGGGTGATGTAATTACCACCATCTGATCAACAGACATCATTCGCCAAAGACCTCTTTCGTCGCTGCCTCTC TCCCCTGAAGCGAAGCCTCC
Downstream 100 bases:
>100_bases ACTGGCAACCTCCCGTCTATCGCAGCCTCATCGGTGCAAGTCATCGGCGCAAAGGCGTTGTGTGTCAGGACTATTCCTTA AGCGCCAGTTTTCGCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Tellurium Resistance Protein
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPFPNVRLTNRPLHFIYICDCSGSMAAQGKMQALNQAIRQSLPGMVKVARDNPEARVLVRAVSFADKASWHISKPTEVEQ LQWVDLQAGGITAMGEALELIATQLCSPPMEERALPPVLVLISDGQPTDDFDAGLKELMNQMWAQKAVRLAIALGHDANM DVLQDFIGPDLEGGSQIGGSMHGVSTSARQPLQASNATALAQYIEWASTAVVGAASMPVSRTQGSASEGNIPLPDLPPTL IEPIDGVGPVVW
Sequences:
>Translated_252_residues MPFPNVRLTNRPLHFIYICDCSGSMAAQGKMQALNQAIRQSLPGMVKVARDNPEARVLVRAVSFADKASWHISKPTEVEQ LQWVDLQAGGITAMGEALELIATQLCSPPMEERALPPVLVLISDGQPTDDFDAGLKELMNQMWAQKAVRLAIALGHDANM DVLQDFIGPDLEGGSQIGGSMHGVSTSARQPLQASNATALAQYIEWASTAVVGAASMPVSRTQGSASEGNIPLPDLPPTL IEPIDGVGPVVW >Mature_251_residues PFPNVRLTNRPLHFIYICDCSGSMAAQGKMQALNQAIRQSLPGMVKVARDNPEARVLVRAVSFADKASWHISKPTEVEQL QWVDLQAGGITAMGEALELIATQLCSPPMEERALPPVLVLISDGQPTDDFDAGLKELMNQMWAQKAVRLAIALGHDANMD VLQDFIGPDLEGGSQIGGSMHGVSTSARQPLQASNATALAQYIEWASTAVVGAASMPVSRTQGSASEGNIPLPDLPPTLI EPIDGVGPVVW
Specific function: Unknown
COG id: COG4245
COG function: function code R; Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26873; Mature: 26742
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPNVRLTNRPLHFIYICDCSGSMAAQGKMQALNQAIRQSLPGMVKVARDNPEARVLVR CCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH AVSFADKASWHISKPTEVEQLQWVDLQAGGITAMGEALELIATQLCSPPMEERALPPVLV HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEE LISDGQPTDDFDAGLKELMNQMWAQKAVRLAIALGHDANMDVLQDFIGPDLEGGSQIGGS EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCCC MHGVSTSARQPLQASNATALAQYIEWASTAVVGAASMPVSRTQGSASEGNIPLPDLPPTL CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH IEPIDGVGPVVW HCCCCCCCCCCC >Mature Secondary Structure PFPNVRLTNRPLHFIYICDCSGSMAAQGKMQALNQAIRQSLPGMVKVARDNPEARVLVR CCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH AVSFADKASWHISKPTEVEQLQWVDLQAGGITAMGEALELIATQLCSPPMEERALPPVLV HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEE LISDGQPTDDFDAGLKELMNQMWAQKAVRLAIALGHDANMDVLQDFIGPDLEGGSQIGGS EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCCC MHGVSTSARQPLQASNATALAQYIEWASTAVVGAASMPVSRTQGSASEGNIPLPDLPPTL CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH IEPIDGVGPVVW HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA