| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024400
Identifier: 124024400
GI number: 124024400
Start: 2391054
End: 2391671
Strand: Reverse
Name: 124024400
Synonym: P9303_27121
Alternate gene names: NA
Gene position: 2391671-2391054 (Counterclockwise)
Preceding gene: 124024401
Following gene: 124024399
Centisome position: 89.15
GC content: 54.21
Gene sequence:
>618_bases ATGCTCAGTCATCCAGTGGCCCGCCTTCTGGCTTTTGCCGTTGTTCCGGCTCTGATCGTTTATGTCGTCGTCCTCGCCCT TGCGGTTGCCGCTGGCATTGAGCCCGGCTTGGTTGTGCGTGACCTGATGCAGACCTGTAAGTACCCAATTGGTGTGGGCA TGCTTTCCAATTTAGGCATTCTGCTTTGGGCTGCGGCTGCGGCGATTAGTTTTTTTGCTTGTTTCTCGGGATTGGTTGTT CAGCGTGGTTGGCGTCAGCTGCTGCTCGTAGGAGGAATCTTCTCCACCACGCTTTGCCTCGACGATCTCTTCTTGCTGCA TGATCGCCACGTTTTAGGGCACGAGGGCTCTTACTACATCCTCTATGCCGTTCTTGCCGTGATTATTTTGTTGCGCTTTC GTCAGCTTGTGCTCCAGGCTGATGGTGTGGCTTTCCTGGCGGCGGCCTTGCTTTTGGGTCTCTCGGTGTTGAGTGATCGT TTCCAGGAGTCTTTACCCATTGACTACGCCACGGTGCAGTTGTTTGAAGAGGGCTTTAAGTTTGTTGGGATTGCCTGCTG GCTTGCCTTCTGGTGGCAGGCTTCTTTACGAGGAGCCAAGCTTTGCGCCAGCGACTGA
Upstream 100 bases:
>100_bases GAGGCTTATTTGGGGCAGATGTGACGGTCCTGTTGGAACTGATCAACTCCGATGAAGCCATGGGTATGGTCCCGGCTTGA TCATTGCGTATTGAGGTTTG
Downstream 100 bases:
>100_bases TCTGCTGAGGATCTCAATGAGAGTTCTCTGATGCTTGGGCCATTGGTATTCCCTATCTGGTTGCGGCTCAGTCTGGTTTT ACCTCTGTTCGCCCTCAATC
Product: oxidoreductase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MLSHPVARLLAFAVVPALIVYVVVLALAVAAGIEPGLVVRDLMQTCKYPIGVGMLSNLGILLWAAAAAISFFACFSGLVV QRGWRQLLLVGGIFSTTLCLDDLFLLHDRHVLGHEGSYYILYAVLAVIILLRFRQLVLQADGVAFLAAALLLGLSVLSDR FQESLPIDYATVQLFEEGFKFVGIACWLAFWWQASLRGAKLCASD
Sequences:
>Translated_205_residues MLSHPVARLLAFAVVPALIVYVVVLALAVAAGIEPGLVVRDLMQTCKYPIGVGMLSNLGILLWAAAAAISFFACFSGLVV QRGWRQLLLVGGIFSTTLCLDDLFLLHDRHVLGHEGSYYILYAVLAVIILLRFRQLVLQADGVAFLAAALLLGLSVLSDR FQESLPIDYATVQLFEEGFKFVGIACWLAFWWQASLRGAKLCASD >Mature_205_residues MLSHPVARLLAFAVVPALIVYVVVLALAVAAGIEPGLVVRDLMQTCKYPIGVGMLSNLGILLWAAAAAISFFACFSGLVV QRGWRQLLLVGGIFSTTLCLDDLFLLHDRHVLGHEGSYYILYAVLAVIILLRFRQLVLQADGVAFLAAALLLGLSVLSDR FQESLPIDYATVQLFEEGFKFVGIACWLAFWWQASLRGAKLCASD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22314; Mature: 22314
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHPVARLLAFAVVPALIVYVVVLALAVAAGIEPGLVVRDLMQTCKYPIGVGMLSNLGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHH LLWAAAAAISFFACFSGLVVQRGWRQLLLVGGIFSTTLCLDDLFLLHDRHVLGHEGSYYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHH LYAVLAVIILLRFRQLVLQADGVAFLAAALLLGLSVLSDRFQESLPIDYATVQLFEEGFK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVGIACWLAFWWQASLRGAKLCASD HHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MLSHPVARLLAFAVVPALIVYVVVLALAVAAGIEPGLVVRDLMQTCKYPIGVGMLSNLGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHH LLWAAAAAISFFACFSGLVVQRGWRQLLLVGGIFSTTLCLDDLFLLHDRHVLGHEGSYYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHH LYAVLAVIILLRFRQLVLQADGVAFLAAALLLGLSVLSDRFQESLPIDYATVQLFEEGFK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVGIACWLAFWWQASLRGAKLCASD HHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA