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The map label for this gene is perM [C]

Identifier: 124024399

GI number: 124024399

Start: 2389953

End: 2391023

Strand: Reverse

Name: perM [C]

Synonym: P9303_27111

Alternate gene names: 124024399

Gene position: 2391023-2389953 (Counterclockwise)

Preceding gene: 124024400

Following gene: 124024398

Centisome position: 89.13

GC content: 53.31

Gene sequence:

>1071_bases
ATGCTTGGGCCATTGGTATTCCCTATCTGGTTGCGGCTCAGTCTGGTTTTACCTCTGTTCGCCCTCAATCTTTGGGTGCT
GCGTCAGTTACTACTGCCTTTAGCTCCGTTCCCAGGGCTGTTTGTCACGGCAGCGCTCATTGCATTTTTGCTAGATATTC
CCAGTCGCTGGATTAATCAGCGTCTGGGGTTGCCCCGTTGGCTGGCCATCGGTGTGGTGGCAGTTTTGACGGTGGGCTTG
TTGGTGTTGGCGGGCGTTGCTTTGGTGCCCCGTCTGATTGATCAGCTTGGCCAGTTGATCAATGAATTACCCGGCTGGCT
TGTGGCTGCAGAAGGTTGGGTGAGTCGGCTGCAGGAATGGGCTTCGGGTCGGGGCTTGCCTAGTGAATTTGGAGACTTCA
GTAGTGATCTACTGACACGACTGAGCGGCGTGGCGACTCAGTTGAGTCAGCAATTACTCGGCATTCTTGGAGCCACTCTT
GGCATCACCATCAACACGTTGTTGGTGCTTGTCTTGGCAGTGTTTCTTTTGCTGGGGGGTGATCCAATCACTGCTGGGCT
GGCTCGTTGGCTGCCAGATCAATGGAGGGAGCTTGTGGTCGATACGATCACGGGCACATTCCGTGGTTATTTTGCTGGGC
AGGTTTTGCTTGCGTTGATTCTCAGCGGTGGCCAAATCGCTGTTTTTACGCTGCTAGATATTCCCTTTGGAGTGTTATTT
GCGGTCTTAATTGGTTTTACGACGTTGATCCCCTACGCCAGTGCGCTCACGATTGTTGGTGTGAGTGCACTGCTCGCATT
ACAGGACCCCCGCATGGGTCTAGAGATTCTGGCCGCTGCGATCGCTGTTGGTCAGATTGTGGATCAAGTGATCCAACCGC
GCCTGATGGGAAGCATCGTTGGCTTGCAGCCTGCTTGGTTGCTGATTGCCTTGCCGATTGGTGCCAGAACAGGAGCATTA
TTTGGTTTTGGGCAGCTCTTGGGGTTATTGCTTGCCGTTCCCGTGGCGAGTTGTATTAAGACACTGGTTGATGCTTGGCG
GGAATTACCTTTCGATCCAGCAGAGTCTTGA

Upstream 100 bases:

>100_bases
GATTGCCTGCTGGCTTGCCTTCTGGTGGCAGGCTTCTTTACGAGGAGCCAAGCTTTGCGCCAGCGACTGATCTGCTGAGG
ATCTCAATGAGAGTTCTCTG

Downstream 100 bases:

>100_bases
GCACGATCTCAACGCACGTTTCCAGACTTTGCTCACCGGTATTGATCTTTAGTTCGGGTGACGCAGGGTCTTCATAGGGA
CTGGAAATACCGGTGAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MLGPLVFPIWLRLSLVLPLFALNLWVLRQLLLPLAPFPGLFVTAALIAFLLDIPSRWINQRLGLPRWLAIGVVAVLTVGL
LVLAGVALVPRLIDQLGQLINELPGWLVAAEGWVSRLQEWASGRGLPSEFGDFSSDLLTRLSGVATQLSQQLLGILGATL
GITINTLLVLVLAVFLLLGGDPITAGLARWLPDQWRELVVDTITGTFRGYFAGQVLLALILSGGQIAVFTLLDIPFGVLF
AVLIGFTTLIPYASALTIVGVSALLALQDPRMGLEILAAAIAVGQIVDQVIQPRLMGSIVGLQPAWLLIALPIGARTGAL
FGFGQLLGLLLAVPVASCIKTLVDAWRELPFDPAES

Sequences:

>Translated_356_residues
MLGPLVFPIWLRLSLVLPLFALNLWVLRQLLLPLAPFPGLFVTAALIAFLLDIPSRWINQRLGLPRWLAIGVVAVLTVGL
LVLAGVALVPRLIDQLGQLINELPGWLVAAEGWVSRLQEWASGRGLPSEFGDFSSDLLTRLSGVATQLSQQLLGILGATL
GITINTLLVLVLAVFLLLGGDPITAGLARWLPDQWRELVVDTITGTFRGYFAGQVLLALILSGGQIAVFTLLDIPFGVLF
AVLIGFTTLIPYASALTIVGVSALLALQDPRMGLEILAAAIAVGQIVDQVIQPRLMGSIVGLQPAWLLIALPIGARTGAL
FGFGQLLGLLLAVPVASCIKTLVDAWRELPFDPAES
>Mature_356_residues
MLGPLVFPIWLRLSLVLPLFALNLWVLRQLLLPLAPFPGLFVTAALIAFLLDIPSRWINQRLGLPRWLAIGVVAVLTVGL
LVLAGVALVPRLIDQLGQLINELPGWLVAAEGWVSRLQEWASGRGLPSEFGDFSSDLLTRLSGVATQLSQQLLGILGATL
GITINTLLVLVLAVFLLLGGDPITAGLARWLPDQWRELVVDTITGTFRGYFAGQVLLALILSGGQIAVFTLLDIPFGVLF
AVLIGFTTLIPYASALTIVGVSALLALQDPRMGLEILAAAIAVGQIVDQVIQPRLMGSIVGLQPAWLLIALPIGARTGAL
FGFGQLLGLLLAVPVASCIKTLVDAWRELPFDPAES

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=323, Percent_Identity=25.077399380805, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37967; Mature: 37967

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGPLVFPIWLRLSLVLPLFALNLWVLRQLLLPLAPFPGLFVTAALIAFLLDIPSRWINQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLGLPRWLAIGVVAVLTVGLLVLAGVALVPRLIDQLGQLINELPGWLVAAEGWVSRLQEW
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
ASGRGLPSEFGDFSSDLLTRLSGVATQLSQQLLGILGATLGITINTLLVLVLAVFLLLGG
HCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPITAGLARWLPDQWRELVVDTITGTFRGYFAGQVLLALILSGGQIAVFTLLDIPFGVLF
CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH
AVLIGFTTLIPYASALTIVGVSALLALQDPRMGLEILAAAIAVGQIVDQVIQPRLMGSIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLQPAWLLIALPIGARTGALFGFGQLLGLLLAVPVASCIKTLVDAWRELPFDPAES
CCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLGPLVFPIWLRLSLVLPLFALNLWVLRQLLLPLAPFPGLFVTAALIAFLLDIPSRWINQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLGLPRWLAIGVVAVLTVGLLVLAGVALVPRLIDQLGQLINELPGWLVAAEGWVSRLQEW
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
ASGRGLPSEFGDFSSDLLTRLSGVATQLSQQLLGILGATLGITINTLLVLVLAVFLLLGG
HCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPITAGLARWLPDQWRELVVDTITGTFRGYFAGQVLLALILSGGQIAVFTLLDIPFGVLF
CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH
AVLIGFTTLIPYASALTIVGVSALLALQDPRMGLEILAAAIAVGQIVDQVIQPRLMGSIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLQPAWLLIALPIGARTGALFGFGQLLGLLLAVPVASCIKTLVDAWRELPFDPAES
CCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]