| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is ycf34
Identifier: 124024348
GI number: 124024348
Start: 2348870
End: 2349148
Strand: Reverse
Name: ycf34
Synonym: P9303_26601
Alternate gene names: NA
Gene position: 2349148-2348870 (Counterclockwise)
Preceding gene: 124024352
Following gene: 124024347
Centisome position: 87.57
GC content: 57.35
Gene sequence:
>279_bases ATGGGTGCAGCAGAGCGAAGGGAGGGCATGTGTATTTGTGTCGACTGCCGCTGGGTTGATCGTTGCCAGGCCTATCACGC GGTGGAGCGGCAGCACGGGGTTGCCCATCTCAATGCGGCACCGGATCTGGAGCCTCAGAACCCACGCATCCATATCAGTG TGATTGATTTGGCTGAAGGAGTGACAGGCGTGGAATGGGATGTACGGGACTGCGGTAGTTTTCTTTTAGATCATGGGCGC TGGAAGCGATTGTGCCCTGGTCAGGAGCTGCCTCGATGA
Upstream 100 bases:
>100_bases GGCCGTTCCAGCAGGAAGTTCTTGAATCGATAGTGGCCAGTGATCAGGATGTAATTGTTCCCAAAGGGCCTGGACCCGGA TGGTGGGATCACCCTCCAGA
Downstream 100 bases:
>100_bases GCTGTCAGACCGGTTCATCCTTGGAAGAAGATCAGGCTTTTTTGCTTTTGGCACTCCACAGTTCTTCAGAAACGCTTGGT GTAGCTGTTCTCGATTGCCG
Product: Ycf34
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLAEGVTGVEWDVRDCGSFLLDHGR WKRLCPGQELPR
Sequences:
>Translated_92_residues MGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLAEGVTGVEWDVRDCGSFLLDHGR WKRLCPGQELPR >Mature_91_residues GAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLAEGVTGVEWDVRDCGSFLLDHGRW KRLCPGQELPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10418; Mature: 10287
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLAEG CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEEECCCC VTGVEWDVRDCGSFLLDHGRWKRLCPGQELPR CCCCEECHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLAEG CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEEECCCC VTGVEWDVRDCGSFLLDHGRWKRLCPGQELPR CCCCEECHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA