| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024347
Identifier: 124024347
GI number: 124024347
Start: 2348196
End: 2348873
Strand: Reverse
Name: 124024347
Synonym: P9303_26591
Alternate gene names: NA
Gene position: 2348873-2348196 (Counterclockwise)
Preceding gene: 124024348
Following gene: 124024346
Centisome position: 87.56
GC content: 54.42
Gene sequence:
>678_bases ATGAGCTGTCAGACCGGTTCATCCTTGGAAGAAGATCAGGCTTTTTTGCTTTTGGCACTCCACAGTTCTTCAGAAACGCT TGGTGTAGCTGTTCTCGATTGCCGCGATCCCAAGACCAGTCGGCGTACTGCAACTTTCCCACTGGGCCGCGGGCTCTCAA ATAGTTTGCTCAATTGTGTAGAGGAGCTTTTGCCAGCAGCCTCTTGGCCTCAGTTGGCTCGCTTGGCCGTGGCCATTGGT CCTGGCGGATTTACCGGGACTCGTTTAACCGTCGTGATGGCAAGAACTCTGGCCCAGCAGCTTGGTTGCTCCCTCGATGG GGTGAGCAGTTTTGCTTTGATGGTTCCTCGGTTGGCGGTTGCGTTAAGCGATGAGCAAATGGAGCAGCCATTTTGGATCG TGAAAACCCTGCCGCGGCGGGGAACTGTGGCCGGTCGTTATCAGTTGCAAATGGCTGCAGAAGTTGGCGCTGCAAAGGTT GTTGTGGAGTTGGAATCGCCCCATTTGTTAGCAGAGGATTTCAAGGCCTTCCCTGCCCTTGATGCCCAAGATGATGTGGC TAAGGATGTGGAGCGTTTACTTGAGCTCTGCGCCACGGCGCACAGTTTGGACCAGGAGGTCGCCTGGACTGATGTGCTTC CTATTTATCCCACATCTCCGGTAGTGGTCTCGCCTTGA
Upstream 100 bases:
>100_bases AAGGAGTGACAGGCGTGGAATGGGATGTACGGGACTGCGGTAGTTTTCTTTTAGATCATGGGCGCTGGAAGCGATTGTGC CCTGGTCAGGAGCTGCCTCG
Downstream 100 bases:
>100_bases GGAGTTGGTGTCGTCCTGGGCCAATTGTTGTTGTAGGCCTCTTGTTCTGGCTAATTGCTGCCGGACCTTTGCGTCCTTAT CGGCAAGCGCTAACGAATGG
Product: molecular chaperone
Products: NA
Alternate protein names: Glycoprotease Family Protein; Molecular Chaperone; Glycoprotease Family; Inactive Metal-Dependent Protease
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSCQTGSSLEEDQAFLLLALHSSSETLGVAVLDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIG PGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMVPRLAVALSDEQMEQPFWIVKTLPRRGTVAGRYQLQMAAEVGAAKV VVELESPHLLAEDFKAFPALDAQDDVAKDVERLLELCATAHSLDQEVAWTDVLPIYPTSPVVVSP
Sequences:
>Translated_225_residues MSCQTGSSLEEDQAFLLLALHSSSETLGVAVLDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIG PGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMVPRLAVALSDEQMEQPFWIVKTLPRRGTVAGRYQLQMAAEVGAAKV VVELESPHLLAEDFKAFPALDAQDDVAKDVERLLELCATAHSLDQEVAWTDVLPIYPTSPVVVSP >Mature_224_residues SCQTGSSLEEDQAFLLLALHSSSETLGVAVLDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIGP GGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMVPRLAVALSDEQMEQPFWIVKTLPRRGTVAGRYQLQMAAEVGAAKVV VELESPHLLAEDFKAFPALDAQDDVAKDVERLLELCATAHSLDQEVAWTDVLPIYPTSPVVVSP
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24116; Mature: 23985
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCQTGSSLEEDQAFLLLALHSSSETLGVAVLDCRDPKTSRRTATFPLGRGLSNSLLNCV CCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHH EELLPAASWPQLARLAVAIGPGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMVPRLAV HHHHCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ALSDEQMEQPFWIVKTLPRRGTVAGRYQLQMAAEVGAAKVVVELESPHLLAEDFKAFPAL HCCHHHHCCCEEEEEECCCCCCCCCCEEEEEHHHCCCEEEEEEECCCCHHHHHHHHCCCC DAQDDVAKDVERLLELCATAHSLDQEVAWTDVLPIYPTSPVVVSP CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECC >Mature Secondary Structure SCQTGSSLEEDQAFLLLALHSSSETLGVAVLDCRDPKTSRRTATFPLGRGLSNSLLNCV CCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHH EELLPAASWPQLARLAVAIGPGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMVPRLAV HHHHCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ALSDEQMEQPFWIVKTLPRRGTVAGRYQLQMAAEVGAAKVVVELESPHLLAEDFKAFPAL HCCHHHHCCCEEEEEECCCCCCCCCCEEEEEHHHCCCEEEEEEECCCCHHHHHHHHCCCC DAQDDVAKDVERLLELCATAHSLDQEVAWTDVLPIYPTSPVVVSP CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA