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The map label for this gene is 124024330

Identifier: 124024330

GI number: 124024330

Start: 2332374

End: 2333369

Strand: Reverse

Name: 124024330

Synonym: P9303_26421

Alternate gene names: NA

Gene position: 2333369-2332374 (Counterclockwise)

Preceding gene: 124024331

Following gene: 124024329

Centisome position: 86.98

GC content: 43.67

Gene sequence:

>996_bases
ATGAGTACTCCCCTTCCGTCGAATTCCCAGGCTCAGCGAGATGCTGGTGATTATCTTCGCGAGAGCTTGGTTAGACAAAA
GCTTGTGCAACGTATTTGTGGCCAGGCTGTTATCTATTTTGGGGCATTTATTGTTGCAGTTTCGCTGTATAAATTTGTCA
GCGCTTTCTCGTTAGATGTCTCTCCTTGGCCTGAGCTGCAGCTTGGAGTCGCTGGCCTGTTGTTAGCTTTTTTAGGTAAT
TTTCTGCGACGCTCAACCTTTTTAAAGTCTTTGCTTTCGGAGTTTAGTCCTTCGGCTAGAGCAAGTAGATCTCTATTGAT
GTTGATCCTTGCATTATTTATTATGGGATCTGTAGTTCTATTCAAGCTGTCAGTTCAGGATGTTTTGCGTTACAAACGGC
TGCTTGGAGAAGGAGGAATTCTTGAGTACTTGCAGGCTCTAATTCTGTTCACTTCTGCCTGGGTCTCTTGGCTGATTTCT
AGGGACTTATGGAGGCGTCTGTTGATGCGCTTGCATGGAGCCATTTATGGGATTATTGCTTTGGGAATGCTTTTTGTTGG
CTTAGAGGAGCTTGCTTGGGGTCAGGTTTTGTTTGGCTGGAGAACACCTGATAATATAGCGGCTCTCAATGCTCAAAATC
AGACAACGATTCATAACCTCGAGTTTTTTCAAGATTATCTTGATATGAATCTTTTTCTGGTGTCAGCATTGATTCTAGTT
TTGGTGTTATGGCGGCCATCTTTTGGATTGTTTAAAGCAAGATCATCTCGAGAGGATGTAATTCCTGTTGGAACATTTTT
TCTGCCCAGGTATTTCTGGCCTCTATTCTTTTGTGCTGCGTTTTTGTCTTATTTTGTTGCTACCAGGTCAGCGACAGCTT
TGGTTCTGAATATTGATCAGGAGTGGGCAGAGTTGATGCTTTATCTCTCCTTCGGTCTAGGGTTGCTGCGAACCTATGTC
TTGCTAGCAAATCCTTCAGGGCGCCAAAATGGTTGA

Upstream 100 bases:

>100_bases
AGGCCAATGGGCTTGCTGGCTGTGATGGCTTCTTCTCTTGAATATCACATGGCCAATTAAGATTGTATTAATCTTCCCTT
AAGACACAGAGCAGTGCCTA

Downstream 100 bases:

>100_bases
TAGACATCTGCCGGTATTGAGAGAGTTGCCACCTGAGTTAGTGATGTTATGAGTTGAGGTTATCTTTTGGTATTAAGTAT
AATTCTTCTCGCCTATTATT

Product: pectate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSTPLPSNSQAQRDAGDYLRESLVRQKLVQRICGQAVIYFGAFIVAVSLYKFVSAFSLDVSPWPELQLGVAGLLLAFLGN
FLRRSTFLKSLLSEFSPSARASRSLLMLILALFIMGSVVLFKLSVQDVLRYKRLLGEGGILEYLQALILFTSAWVSWLIS
RDLWRRLLMRLHGAIYGIIALGMLFVGLEELAWGQVLFGWRTPDNIAALNAQNQTTIHNLEFFQDYLDMNLFLVSALILV
LVLWRPSFGLFKARSSREDVIPVGTFFLPRYFWPLFFCAAFLSYFVATRSATALVLNIDQEWAELMLYLSFGLGLLRTYV
LLANPSGRQNG

Sequences:

>Translated_331_residues
MSTPLPSNSQAQRDAGDYLRESLVRQKLVQRICGQAVIYFGAFIVAVSLYKFVSAFSLDVSPWPELQLGVAGLLLAFLGN
FLRRSTFLKSLLSEFSPSARASRSLLMLILALFIMGSVVLFKLSVQDVLRYKRLLGEGGILEYLQALILFTSAWVSWLIS
RDLWRRLLMRLHGAIYGIIALGMLFVGLEELAWGQVLFGWRTPDNIAALNAQNQTTIHNLEFFQDYLDMNLFLVSALILV
LVLWRPSFGLFKARSSREDVIPVGTFFLPRYFWPLFFCAAFLSYFVATRSATALVLNIDQEWAELMLYLSFGLGLLRTYV
LLANPSGRQNG
>Mature_330_residues
STPLPSNSQAQRDAGDYLRESLVRQKLVQRICGQAVIYFGAFIVAVSLYKFVSAFSLDVSPWPELQLGVAGLLLAFLGNF
LRRSTFLKSLLSEFSPSARASRSLLMLILALFIMGSVVLFKLSVQDVLRYKRLLGEGGILEYLQALILFTSAWVSWLISR
DLWRRLLMRLHGAIYGIIALGMLFVGLEELAWGQVLFGWRTPDNIAALNAQNQTTIHNLEFFQDYLDMNLFLVSALILVL
VLWRPSFGLFKARSSREDVIPVGTFFLPRYFWPLFFCAAFLSYFVATRSATALVLNIDQEWAELMLYLSFGLGLLRTYVL
LANPSGRQNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37409; Mature: 37277

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLPSNSQAQRDAGDYLRESLVRQKLVQRICGQAVIYFGAFIVAVSLYKFVSAFSLDV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPWPELQLGVAGLLLAFLGNFLRRSTFLKSLLSEFSPSARASRSLLMLILALFIMGSVVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FKLSVQDVLRYKRLLGEGGILEYLQALILFTSAWVSWLISRDLWRRLLMRLHGAIYGIIA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMLFVGLEELAWGQVLFGWRTPDNIAALNAQNQTTIHNLEFFQDYLDMNLFLVSALILV
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVLWRPSFGLFKARSSREDVIPVGTFFLPRYFWPLFFCAAFLSYFVATRSATALVLNIDQ
HHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH
EWAELMLYLSFGLGLLRTYVLLANPSGRQNG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STPLPSNSQAQRDAGDYLRESLVRQKLVQRICGQAVIYFGAFIVAVSLYKFVSAFSLDV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPWPELQLGVAGLLLAFLGNFLRRSTFLKSLLSEFSPSARASRSLLMLILALFIMGSVVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FKLSVQDVLRYKRLLGEGGILEYLQALILFTSAWVSWLISRDLWRRLLMRLHGAIYGIIA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMLFVGLEELAWGQVLFGWRTPDNIAALNAQNQTTIHNLEFFQDYLDMNLFLVSALILV
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVLWRPSFGLFKARSSREDVIPVGTFFLPRYFWPLFFCAAFLSYFVATRSATALVLNIDQ
HHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH
EWAELMLYLSFGLGLLRTYVLLANPSGRQNG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA