Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124024329

Identifier: 124024329

GI number: 124024329

Start: 2330514

End: 2332142

Strand: Reverse

Name: 124024329

Synonym: P9303_26411

Alternate gene names: NA

Gene position: 2332142-2330514 (Counterclockwise)

Preceding gene: 124024330

Following gene: 124024328

Centisome position: 86.93

GC content: 54.08

Gene sequence:

>1629_bases
ATGTCATCTCTTGTCAGTGGGTTGAGGTCCTATCGCAGAGACAACTTCCCTTGGGTGGTTCTTGGGATGGCTGGCGGCTT
TTGGCTGGTCGGACTACTGATTCAGTTTTGGCGCCTTGAAAGCCTTACTGCTACTTACGACCAAGCTCTTTTTTTGCAGG
AGCTTTGGTCTACTGCTAGGGGTCATTTTTTTGAAAGTAGCCTTTCGTCGGAGTTGTCGGCAGCTGTTGCCAATCAAGAT
GCTTTGCCAAGCATCGACTATCTCCATCTTGGCCAGCACGCCAATGTGTTGACTGTGTTGGCAGCGCCCTTAGTAGCACT
CTTTGGTCGCTGGGCCTTGCCGTTGATTCAAGTGGGGCTGTTGGCTCTAGCAGGTTTGGTGTTGTGGCGGATCGCGTCGG
CCCGATTGTCGAGACCCTTGGCGATTCGCTTGACCGCGTCCTACTACCTCAGTGGAACCGTGATTGGCCCACTGGTTGAA
AACTTTCACGACCTTTGTTGGTTGCCATTACTGGGCTTTTTGGTTGTTGATGGTCTCCTCAAGCAGGGGTGGCGCCAGGT
GATGGCTTGCAGTTTCCTGATGCTGTTGGTGCGTGAAGATGCGGGACTCACCCTGTTTTCACTTGGATTGTGGGCATCGC
TTCTTCGACCTGGTGCACGCGCCATCGGCCTCATGGTCATGGCGATGTCGTTGGTTTATGTGGCAGTGATGACTGGCTGG
ATTCAGCCCCAGTTTGATTCCTCCCTGTCTGATCGCTTTCTGCAGGAAAAGTTTGGGCATCTTTTGCAAGGCCGCACTGG
TGGGACCTTCACCGTTCTATGGACGATGGTTACCCATCCGCTTCGTTTGCTGGCGGCCTTGGTGTCTCCTCCTGGAACCA
CCTTGGCTTTTCTGCTGGCGCCAGCGTTGCCTTTGGCCTTTATCCCCTTTGTCTCGCTGGATGTGGCCCTGATGGTGGCT
GTGCCTTTATTCATCGCCTTGGTGTCCCAGGGTATGAGTGCGTTGTCGGTAACGCTCAGGTATGTGCTTGCTTTGGTCCC
AGGGTTATTTATGGGCTCAATGCTTTGGTGGCAGGCCCATCCAGGTTTCTGGTCTCATCTTTGGTTCCGGCGTTTCTGGA
TGGGATGTCTTGCCCTAGGGCTTGTTTTGACTTTGGCAAGCAATCCCCATCGCACCTTCTCCGCTCTTGTACCGGATAGC
TTTAGTCCATTGGTTCATGTCTCGCCGGTCGCCATGCTGCAGCGAGCTGCAACGGCCCGTCATGCCGTTGGGCTTGTGCC
AGATAACGCCTCGGTCGCTGCTGATACTCCATTGTTGCCGCTTCTGGCGGAACGGGAGGTTGCCTTGCGCTTTCCGAAAA
ATATCGAGTACTACAACCGTCAGGATCAAATTGAATCGGTTCAATGGGTCTTGGCTTTCCCTGGCTATTACCGTTCGTTG
ATGCCACTGTTTCGCCAGGAAACGTCTCGTTGGCGATCGATCAATAAGGCCTTGCAGGAACTCATTGACGAGGGGCGTTA
CGGGGTGGTGAGCTGCGCGGATGGGTTGGTGGTCTTGCGCAATGGCGTTGACTCCTCTCCTGATGCAAGACGTTGCCTTG
ATGCATTGCTAGCACTTGAGCCTGGATGA

Upstream 100 bases:

>100_bases
ACCAGATTGGCTCTGCTCTTTTCTCCTGGTCTTTATTCTTCCTTAGGATGGTATTTGGCGGCTCTCTAGTATTTATTTCG
GCAGCTGAGGAATGATGCGA

Downstream 100 bases:

>100_bases
AATAGAAGGTTGAGAACGTGCCTTCTGCTCGATTCCGGTTACTGTTGATTTGCTTTGGCAATAGCGAAGTGACTTTGCTT
GAAATAGGCATTCGTCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MSSLVSGLRSYRRDNFPWVVLGMAGGFWLVGLLIQFWRLESLTATYDQALFLQELWSTARGHFFESSLSSELSAAVANQD
ALPSIDYLHLGQHANVLTVLAAPLVALFGRWALPLIQVGLLALAGLVLWRIASARLSRPLAIRLTASYYLSGTVIGPLVE
NFHDLCWLPLLGFLVVDGLLKQGWRQVMACSFLMLLVREDAGLTLFSLGLWASLLRPGARAIGLMVMAMSLVYVAVMTGW
IQPQFDSSLSDRFLQEKFGHLLQGRTGGTFTVLWTMVTHPLRLLAALVSPPGTTLAFLLAPALPLAFIPFVSLDVALMVA
VPLFIALVSQGMSALSVTLRYVLALVPGLFMGSMLWWQAHPGFWSHLWFRRFWMGCLALGLVLTLASNPHRTFSALVPDS
FSPLVHVSPVAMLQRAATARHAVGLVPDNASVAADTPLLPLLAEREVALRFPKNIEYYNRQDQIESVQWVLAFPGYYRSL
MPLFRQETSRWRSINKALQELIDEGRYGVVSCADGLVVLRNGVDSSPDARRCLDALLALEPG

Sequences:

>Translated_542_residues
MSSLVSGLRSYRRDNFPWVVLGMAGGFWLVGLLIQFWRLESLTATYDQALFLQELWSTARGHFFESSLSSELSAAVANQD
ALPSIDYLHLGQHANVLTVLAAPLVALFGRWALPLIQVGLLALAGLVLWRIASARLSRPLAIRLTASYYLSGTVIGPLVE
NFHDLCWLPLLGFLVVDGLLKQGWRQVMACSFLMLLVREDAGLTLFSLGLWASLLRPGARAIGLMVMAMSLVYVAVMTGW
IQPQFDSSLSDRFLQEKFGHLLQGRTGGTFTVLWTMVTHPLRLLAALVSPPGTTLAFLLAPALPLAFIPFVSLDVALMVA
VPLFIALVSQGMSALSVTLRYVLALVPGLFMGSMLWWQAHPGFWSHLWFRRFWMGCLALGLVLTLASNPHRTFSALVPDS
FSPLVHVSPVAMLQRAATARHAVGLVPDNASVAADTPLLPLLAEREVALRFPKNIEYYNRQDQIESVQWVLAFPGYYRSL
MPLFRQETSRWRSINKALQELIDEGRYGVVSCADGLVVLRNGVDSSPDARRCLDALLALEPG
>Mature_541_residues
SSLVSGLRSYRRDNFPWVVLGMAGGFWLVGLLIQFWRLESLTATYDQALFLQELWSTARGHFFESSLSSELSAAVANQDA
LPSIDYLHLGQHANVLTVLAAPLVALFGRWALPLIQVGLLALAGLVLWRIASARLSRPLAIRLTASYYLSGTVIGPLVEN
FHDLCWLPLLGFLVVDGLLKQGWRQVMACSFLMLLVREDAGLTLFSLGLWASLLRPGARAIGLMVMAMSLVYVAVMTGWI
QPQFDSSLSDRFLQEKFGHLLQGRTGGTFTVLWTMVTHPLRLLAALVSPPGTTLAFLLAPALPLAFIPFVSLDVALMVAV
PLFIALVSQGMSALSVTLRYVLALVPGLFMGSMLWWQAHPGFWSHLWFRRFWMGCLALGLVLTLASNPHRTFSALVPDSF
SPLVHVSPVAMLQRAATARHAVGLVPDNASVAADTPLLPLLAEREVALRFPKNIEYYNRQDQIESVQWVLAFPGYYRSLM
PLFRQETSRWRSINKALQELIDEGRYGVVSCADGLVVLRNGVDSSPDARRCLDALLALEPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59783; Mature: 59652

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLVSGLRSYRRDNFPWVVLGMAGGFWLVGLLIQFWRLESLTATYDQALFLQELWSTAR
CHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHFFESSLSSELSAAVANQDALPSIDYLHLGQHANVLTVLAAPLVALFGRWALPLIQVGL
CCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LALAGLVLWRIASARLSRPLAIRLTASYYLSGTVIGPLVENFHDLCWLPLLGFLVVDGLL
HHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGWRQVMACSFLMLLVREDAGLTLFSLGLWASLLRPGARAIGLMVMAMSLVYVAVMTGW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
IQPQFDSSLSDRFLQEKFGHLLQGRTGGTFTVLWTMVTHPLRLLAALVSPPGTTLAFLLA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
PALPLAFIPFVSLDVALMVAVPLFIALVSQGMSALSVTLRYVLALVPGLFMGSMLWWQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGFWSHLWFRRFWMGCLALGLVLTLASNPHRTFSALVPDSFSPLVHVSPVAMLQRAATAR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEECCHHHHHHHHHHHH
HAVGLVPDNASVAADTPLLPLLAEREVALRFPKNIEYYNRQDQIESVQWVLAFPGYYRSL
HHCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
MPLFRQETSRWRSINKALQELIDEGRYGVVSCADGLVVLRNGVDSSPDARRCLDALLALE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHEEECCCCCCCHHHHHHHHHHHCC
PG
CC
>Mature Secondary Structure 
SSLVSGLRSYRRDNFPWVVLGMAGGFWLVGLLIQFWRLESLTATYDQALFLQELWSTAR
HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHFFESSLSSELSAAVANQDALPSIDYLHLGQHANVLTVLAAPLVALFGRWALPLIQVGL
CCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LALAGLVLWRIASARLSRPLAIRLTASYYLSGTVIGPLVENFHDLCWLPLLGFLVVDGLL
HHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGWRQVMACSFLMLLVREDAGLTLFSLGLWASLLRPGARAIGLMVMAMSLVYVAVMTGW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
IQPQFDSSLSDRFLQEKFGHLLQGRTGGTFTVLWTMVTHPLRLLAALVSPPGTTLAFLLA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
PALPLAFIPFVSLDVALMVAVPLFIALVSQGMSALSVTLRYVLALVPGLFMGSMLWWQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGFWSHLWFRRFWMGCLALGLVLTLASNPHRTFSALVPDSFSPLVHVSPVAMLQRAATAR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEECCHHHHHHHHHHHH
HAVGLVPDNASVAADTPLLPLLAEREVALRFPKNIEYYNRQDQIESVQWVLAFPGYYRSL
HHCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
MPLFRQETSRWRSINKALQELIDEGRYGVVSCADGLVVLRNGVDSSPDARRCLDALLALE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHEEECCCCCCCHHHHHHHHHHHCC
PG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA