| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yugF [H]
Identifier: 124024281
GI number: 124024281
Start: 2287146
End: 2288105
Strand: Reverse
Name: yugF [H]
Synonym: P9303_25921
Alternate gene names: 124024281
Gene position: 2288105-2287146 (Counterclockwise)
Preceding gene: 124024282
Following gene: 124024280
Centisome position: 85.29
GC content: 49.38
Gene sequence:
>960_bases GTGACGTCAGCTCCATCTGCCGTGCTTAATGCTTCCTGGAGCCATCTGGGGCACGATGTTCATTGCCTACAACGCATCCC AGAACAGGATGTTGAGCATGGGGGGCGCCAACGGCCGGCACTGTTGTTGGTGCATGGCTTTGGAGCTTCTACCGATCACT GGCGCCACAACATTCCGAAGCTCTCTCTCACCCATGAGGTGCATGCCATAGACCTGCTTGGTTTTGGCCGTAGTGCCAAA CCTGGCGGGCTGGATTATGGCGGGGACCTTTGGAAAGACCAGTTGGTTTCCTATGTCAACGAGCGCATTGGAAGGCCCAC TGTGATTGTTGGCAATTCGCTGGGAGGTTATGCCGCCTTGGCTGCAGCTGCTGCTCTTGAATCGCAATCGGCCGGAGTGG TTTTACTGAATGCTGCTGGTTATTTCAGCGATGAGAAGTTTTCTCCAAAACCAAAAGATATGAGTTCGAGGCTTCGCCAG ATGATTGGGCAAGGTCTTTCAAGGGATCTTGTGGTGAAGTGGTTGATATATCCCTTGATACAGAGAATGATCTTTGAGAA TCTGCGCAGGCCTGGTGTCATTCGCAGGACTCTCCAGCAGGTTTATATCGATCCTGCCAATGTTGATGATGATCTAATTG AGTCGATTCGTAGGCCTTCTCTGGATCCAGGCGCATTCCAAGTGTTTCGCAATGTTTTTCAGGCACGTGGGCTTAGGGGT AAGGCTATTGATGAATTGTTTAATGATTTGCAAGCTCCTCTGTTATTGCTCTGGGGTGATGGTGATCCTTGGTTGAGGAA TGCAAAAGCCAAGCAAGATAAGTTTCGCACATATGCCAAAGAAGCTTCTTTGGAAGTGAAAGAGGTGCTTTTAAATGCTG GACATTGCCCTCATGATGAGGTGCCTGACTTGGTGAATTCTGAATTGCTGGAGTGGCTAAATGGTTTGAGTATTGCTTGA
Upstream 100 bases:
>100_bases CCGCCAATCCTGTCGGGCTGGTTTAGTGCAGCTTCTTTGCTTGCACAGGCCTCAAAAGTAAAAGAATTGCCTACCATCAC CTTTCGCCACCGTCGCCGTT
Downstream 100 bases:
>100_bases TTTAGGAATGATTGACGGCCATCATTCTCCTCTTCTCCGCAAGCAGAGTCCCTATCCTCATTGGCAGTATCTGCACCCAG AAAGTGGTGATCGTTTGCGG
Product: alpha/beta superfamily hydrolase/acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTSAPSAVLNASWSHLGHDVHCLQRIPEQDVEHGGRQRPALLLVHGFGASTDHWRHNIPKLSLTHEVHAIDLLGFGRSAK PGGLDYGGDLWKDQLVSYVNERIGRPTVIVGNSLGGYAALAAAAALESQSAGVVLLNAAGYFSDEKFSPKPKDMSSRLRQ MIGQGLSRDLVVKWLIYPLIQRMIFENLRRPGVIRRTLQQVYIDPANVDDDLIESIRRPSLDPGAFQVFRNVFQARGLRG KAIDELFNDLQAPLLLLWGDGDPWLRNAKAKQDKFRTYAKEASLEVKEVLLNAGHCPHDEVPDLVNSELLEWLNGLSIA
Sequences:
>Translated_319_residues MTSAPSAVLNASWSHLGHDVHCLQRIPEQDVEHGGRQRPALLLVHGFGASTDHWRHNIPKLSLTHEVHAIDLLGFGRSAK PGGLDYGGDLWKDQLVSYVNERIGRPTVIVGNSLGGYAALAAAAALESQSAGVVLLNAAGYFSDEKFSPKPKDMSSRLRQ MIGQGLSRDLVVKWLIYPLIQRMIFENLRRPGVIRRTLQQVYIDPANVDDDLIESIRRPSLDPGAFQVFRNVFQARGLRG KAIDELFNDLQAPLLLLWGDGDPWLRNAKAKQDKFRTYAKEASLEVKEVLLNAGHCPHDEVPDLVNSELLEWLNGLSIA >Mature_318_residues TSAPSAVLNASWSHLGHDVHCLQRIPEQDVEHGGRQRPALLLVHGFGASTDHWRHNIPKLSLTHEVHAIDLLGFGRSAKP GGLDYGGDLWKDQLVSYVNERIGRPTVIVGNSLGGYAALAAAAALESQSAGVVLLNAAGYFSDEKFSPKPKDMSSRLRQM IGQGLSRDLVVKWLIYPLIQRMIFENLRRPGVIRRTLQQVYIDPANVDDDLIESIRRPSLDPGAFQVFRNVFQARGLRGK AIDELFNDLQAPLLLLWGDGDPWLRNAKAKQDKFRTYAKEASLEVKEVLLNAGHCPHDEVPDLVNSELLEWLNGLSIA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 35385; Mature: 35254
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAPSAVLNASWSHLGHDVHCLQRIPEQDVEHGGRQRPALLLVHGFGASTDHWRHNIPK CCCCCCHHHHCCHHHHCCHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCC LSLTHEVHAIDLLGFGRSAKPGGLDYGGDLWKDQLVSYVNERIGRPTVIVGNSLGGYAAL EEEHHHHHEEHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH AAAAALESQSAGVVLLNAAGYFSDEKFSPKPKDMSSRLRQMIGQGLSRDLVVKWLIYPLI HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH QRMIFENLRRPGVIRRTLQQVYIDPANVDDDLIESIRRPSLDPGAFQVFRNVFQARGLRG HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC KAIDELFNDLQAPLLLLWGDGDPWLRNAKAKQDKFRTYAKEASLEVKEVLLNAGHCPHDE HHHHHHHHHHCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPDLVNSELLEWLNGLSIA CHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSAPSAVLNASWSHLGHDVHCLQRIPEQDVEHGGRQRPALLLVHGFGASTDHWRHNIPK CCCCCHHHHCCHHHHCCHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCC LSLTHEVHAIDLLGFGRSAKPGGLDYGGDLWKDQLVSYVNERIGRPTVIVGNSLGGYAAL EEEHHHHHEEHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH AAAAALESQSAGVVLLNAAGYFSDEKFSPKPKDMSSRLRQMIGQGLSRDLVVKWLIYPLI HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH QRMIFENLRRPGVIRRTLQQVYIDPANVDDDLIESIRRPSLDPGAFQVFRNVFQARGLRG HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC KAIDELFNDLQAPLLLLWGDGDPWLRNAKAKQDKFRTYAKEASLEVKEVLLNAGHCPHDE HHHHHHHHHHCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPDLVNSELLEWLNGLSIA CHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]