| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024203
Identifier: 124024203
GI number: 124024203
Start: 2210863
End: 2211426
Strand: Reverse
Name: 124024203
Synonym: P9303_25141
Alternate gene names: NA
Gene position: 2211426-2210863 (Counterclockwise)
Preceding gene: 124024207
Following gene: 124024202
Centisome position: 82.43
GC content: 56.03
Gene sequence:
>564_bases ATGACTTTGCATGGCGGCATCAATGCCTTGAAGCAAGTCAATGCAAAAGGTAAGACCTTCCTGTTAGTGGCTTTGGCCGT AGTCCTTAACGGCTGTATGACGTCGTCTTCCAAACCCAGCTGGGCTATTTATCCCTTGCAGCGGCATCAAGCTCATGACG GCCTGGCGGTGGTGAGTGAGCCTGATGGCTATGGCGTGCATCTCTTTCTCGAAACGGACACCAGTGATCCAGCGATCTGT ACGCCCCGTTGGTTGCCAGACCCTGCAAGGCTTTTCAATGGCAATGGCAATGCCCCATTCAGCTCAGGGCTTGCGTCTCG TAAGGAATTTTTCGTGGTAGTGGCCCGCGGGGATGTGCGCCGTGCGTTGAAGCGTGAGCTGAAGGCTCTTTGTGTCGATC GGGCGCCTAGGGCGAGATGGCGCTGGCAGGAGCCGCCCCGCGCTGCTGATCAGGTGAAGCCTTTGAGATTGCCTGCGTTG GAGGAAGAGGACCTGCTCAGGGATCCAGAAGAAGAGAGGAAGCTTCAGGAGGAGTTGTTAAACGGCAACTCGTCTGGAAG CTGA
Upstream 100 bases:
>100_bases CCACCTTCAATTCAAACGAGGGTAAGGGGGTCCCGAGAGGCAGCATCGTGGAGGGAGTGAGGGCCATGTTGGGAAAGCAG CCCATCAATGCTGGTTCAGG
Downstream 100 bases:
>100_bases TCGAATAGAACTCTTGGCGACCTTATTCGGGGCATCCAGTGAAACTCGGCGTGGCATGGGAGAGAATCGCTGCCAATGTT CCCTAGTTCGTTCGCTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTLHGGINALKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPDGYGVHLFLETDTSDPAIC TPRWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPAL EEEDLLRDPEEERKLQEELLNGNSSGS
Sequences:
>Translated_187_residues MTLHGGINALKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPDGYGVHLFLETDTSDPAIC TPRWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPAL EEEDLLRDPEEERKLQEELLNGNSSGS >Mature_186_residues TLHGGINALKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPDGYGVHLFLETDTSDPAICT PRWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALE EEDLLRDPEEERKLQEELLNGNSSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20704; Mature: 20573
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHGGINALKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSE CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCEEEEEC PDGYGVHLFLETDTSDPAICTPRWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVR CCCCEEEEEEECCCCCCCEECCCCCCCHHHHCCCCCCCCCHHCCCCCCEEEEEEECCHHH RALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALEEEDLLRDPEEERKLQEELL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH NGNSSGS CCCCCCC >Mature Secondary Structure TLHGGINALKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSE CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCEEEEEC PDGYGVHLFLETDTSDPAICTPRWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVR CCCCEEEEEEECCCCCCCEECCCCCCCHHHHCCCCCCCCCHHCCCCCCEEEEEEECCHHH RALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALEEEDLLRDPEEERKLQEELL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH NGNSSGS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA