| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is hisB
Identifier: 124024201
GI number: 124024201
Start: 2209324
End: 2209953
Strand: Reverse
Name: hisB
Synonym: P9303_25121
Alternate gene names: 124024201
Gene position: 2209953-2209324 (Counterclockwise)
Preceding gene: 124024202
Following gene: 124024200
Centisome position: 82.38
GC content: 55.4
Gene sequence:
>630_bases ATGGGCATCATGACGTCGCTAAGGCAGGGGGATGTTCATCGCGTCACCGCTGAAACCGACGTGCTTGTTCGTGTTGGGCT TGATGGCTGTGGTCAGTGCAACGTTTCTACGGGGGTCGCCTTCCTCGATCACATGCTTCACCAGCTTTCCAGCCATGGCC TGCTGGATTTAGAGATCACCGCGACTGGTGACACCCACATCGATGACCATCACACCAATGAGGATGTGGGTATAGCTGTT GGTCAGGCCCTATCTCAGGCCCTTGGAGATCGACGTGGCATCCACCGCTTCGGTCATTTTGTGGCACCACTCGATGAGGC GTTGGTTCAGGTCGTTCTGGATTGCTCCGGTAGGCCACATTTCAGTTATGGCCTGCAAATTCCCTCTCAGCGAATTGGTA GTTACGACAGCGAGTTGGTGAAGGAGTTCTTCGTGGCAGTTGTTAACAACAGCGGCCTCACCCTGCATATTCGTCAGTTG GCAGGCACCAATTCCCACCACATCGTTGAAGCTTGTTTCAAGGCCTTTGCCAGAGCTCTGCGCATGGCAATTGAAATCGA CCCGCGAAGGGCCGGTGCAGTACCAAGCAGCAAGGGTGTGCTGGAGCAGGCTGGCGGGCAGAAGAGCTGA
Upstream 100 bases:
>100_bases GAGCGATCTTTCCAGTGGGATCTCCGGTCAGACGCTTTATGTGGATGCTGGTTACTGCATTAACGGAATGTGATTTGACT GGCAGCATGACTTCATTTGG
Downstream 100 bases:
>100_bases ATGCTTTGGGAGTGGGGATTTCCTCGCTCGCGGCTGTAAGCCCTTTTGCGTAAGGATTGGTCAATCTTGATCAGCCTTGC AGTGAGCACAGTGAGCGATA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAV GQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHFSYGLQIPSQRIGSYDSELVKEFFVAVVNNSGLTLHIRQL AGTNSHHIVEACFKAFARALRMAIEIDPRRAGAVPSSKGVLEQAGGQKS
Sequences:
>Translated_209_residues MGIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAV GQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHFSYGLQIPSQRIGSYDSELVKEFFVAVVNNSGLTLHIRQL AGTNSHHIVEACFKAFARALRMAIEIDPRRAGAVPSSKGVLEQAGGQKS >Mature_208_residues GIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEITATGDTHIDDHHTNEDVGIAVG QALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPHFSYGLQIPSQRIGSYDSELVKEFFVAVVNNSGLTLHIRQLA GTNSHHIVEACFKAFARALRMAIEIDPRRAGAVPSSKGVLEQAGGQKS
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=48.9690721649485, Blast_Score=184, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=168, Percent_Identity=47.0238095238095, Blast_Score=152, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_PROM3 (A2CCN3)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001018508.1 - ProteinModelPortal: A2CCN3 - SMR: A2CCN3 - STRING: A2CCN3 - GeneID: 4777718 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_25121 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - ProtClustDB: PRK00951 - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22480; Mature: 22349
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEIT CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE ATGDTHIDDHHTNEDVGIAVGQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPH ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC FSYGLQIPSQRIGSYDSELVKEFFVAVVNNSGLTLHIRQLAGTNSHHIVEACFKAFARAL CEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHH RMAIEIDPRRAGAVPSSKGVLEQAGGQKS HHHHEECCHHCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure GIMTSLRQGDVHRVTAETDVLVRVGLDGCGQCNVSTGVAFLDHMLHQLSSHGLLDLEIT CCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE ATGDTHIDDHHTNEDVGIAVGQALSQALGDRRGIHRFGHFVAPLDEALVQVVLDCSGRPH ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC FSYGLQIPSQRIGSYDSELVKEFFVAVVNNSGLTLHIRQLAGTNSHHIVEACFKAFARAL CEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHH RMAIEIDPRRAGAVPSSKGVLEQAGGQKS HHHHEECCHHCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA