| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is rfe [H]
Identifier: 124024160
GI number: 124024160
Start: 2172154
End: 2173302
Strand: Reverse
Name: rfe [H]
Synonym: P9303_24711
Alternate gene names: 124024160
Gene position: 2173302-2172154 (Counterclockwise)
Preceding gene: 124024161
Following gene: 124024159
Centisome position: 81.01
GC content: 54.83
Gene sequence:
>1149_bases TTGACTCTCGCGAGCAGCCCCTTTGCTTTTGCTACGGCGAGCTTCGTGATGGCTGCTGTGCTTACAACTTTGGTTGTCCC ACTCGTGCGGGCGCTAGGCCTTCATCTCGGTCTCACTGATCAGCCTGATTCCCGCAAGCAGCACAGCACTCCGATGGTGC GTCTTGGTGGCATCGCCATGGTGCTGGGATTTGGTTTGGCTCTGGCAGTGACATGGGGGCTAGGGGGGTTTGGTTTACTT GCGCCTGCGAAGGATCAGCTGATCTGGTCCACGCTGGCGGGGGCTCTTTGCTTTTTTGTGATTGGCCTGGCAGATGATTT GTTCGCTTTGTCTCCTTGGCCTCGTTTGGCAGGACAGGTGGCCGTTGCGTTTGCGATGTGGACTCAGGGGGTACGCATTG GAACGATTGAGTTCCCCTGGTTGGGGGAAGGCTCTTCTTCTTTAATTGCCTTGCCGGATTTGCTTAGCCTTGCTGCCACG CTGGTTTGGCTTGTGGGTATTACCAATGCCATCAATTGGCTAGATGGTCTTGATGGTCTTGCGGCAGGAGTGGCTGGTAT TGCCGCTGTTGGTCTTGTGTCGGTCAGTTTTTCACTTCATCAAGTGGCTGCAGGTTTTCTGGCAGCCGCTTTGGCGGGCT GTTGTCTTGGTTTTCTGCGCCATAACTTCAATCCAGCCCGCATTTTTATGGGTGATGGTGGCTCCTATTTCCTTGGCTTT ACCTTGGCAGCAATCAGCATCGTGGGACCAGCCAAGGGACTCACCACCGTCAGTCTGTTGCTGCCACTGTTGATTTTGTC GCTGCCTTTGGCTGATATGTCGGCAGTGATTATGGGGCGTTTGCGGGAGGGCCGTTCTCCCTTTTATCCTGACCGTCGCC ATCTTCATCACCGTCTGCTGCGCGCAGGCTTCAGTCATCGCCGAACGGTGTTGTTGATCTACGTGTTTACGCAATGGCTA GCAGCATTGGCCCTTGTGGTGGCCAATGCTGAAATGCGTTTTTTGTGGTTGGCTTTAGCGACAGCCATTCTCGTGGCGAC AGTCGTGATCAGCCGTCGTCAACGTAGTGCTGAAGGTGCCTTCGTAGACCCTTCTAGCTCCCTTGCAGCTCCTAGTGATC CACGTGCCTATCGCGATGGTCATGGCTGA
Upstream 100 bases:
>100_bases GCGCTTGCTTGACTGGCCCTTCGCTCTGGAATCACAGGTTTGCTCTGCCTAGGATTCATTCCATCGGCCCTTCTTTAGGT CGCTTGCTACAGGAGCAAAC
Downstream 100 bases:
>100_bases AGCTTCGGCTAGGCGTGGTGTTGAGATCCTTTGCATTGGCACGGAGCTGTTGCTTGGCAACATCCTTAACAGCAATGCTC GTTGGTTAGCTGAGGAGCTG
Product: glycosyl transferase
Products: UMP; Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
Alternate protein names: UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTLASSPFAFATASFVMAAVLTTLVVPLVRALGLHLGLTDQPDSRKQHSTPMVRLGGIAMVLGFGLALAVTWGLGGFGLL APAKDQLIWSTLAGALCFFVIGLADDLFALSPWPRLAGQVAVAFAMWTQGVRIGTIEFPWLGEGSSSLIALPDLLSLAAT LVWLVGITNAINWLDGLDGLAAGVAGIAAVGLVSVSFSLHQVAAGFLAAALAGCCLGFLRHNFNPARIFMGDGGSYFLGF TLAAISIVGPAKGLTTVSLLLPLLILSLPLADMSAVIMGRLREGRSPFYPDRRHLHHRLLRAGFSHRRTVLLIYVFTQWL AALALVVANAEMRFLWLALATAILVATVVISRRQRSAEGAFVDPSSSLAAPSDPRAYRDGHG
Sequences:
>Translated_382_residues MTLASSPFAFATASFVMAAVLTTLVVPLVRALGLHLGLTDQPDSRKQHSTPMVRLGGIAMVLGFGLALAVTWGLGGFGLL APAKDQLIWSTLAGALCFFVIGLADDLFALSPWPRLAGQVAVAFAMWTQGVRIGTIEFPWLGEGSSSLIALPDLLSLAAT LVWLVGITNAINWLDGLDGLAAGVAGIAAVGLVSVSFSLHQVAAGFLAAALAGCCLGFLRHNFNPARIFMGDGGSYFLGF TLAAISIVGPAKGLTTVSLLLPLLILSLPLADMSAVIMGRLREGRSPFYPDRRHLHHRLLRAGFSHRRTVLLIYVFTQWL AALALVVANAEMRFLWLALATAILVATVVISRRQRSAEGAFVDPSSSLAAPSDPRAYRDGHG >Mature_381_residues TLASSPFAFATASFVMAAVLTTLVVPLVRALGLHLGLTDQPDSRKQHSTPMVRLGGIAMVLGFGLALAVTWGLGGFGLLA PAKDQLIWSTLAGALCFFVIGLADDLFALSPWPRLAGQVAVAFAMWTQGVRIGTIEFPWLGEGSSSLIALPDLLSLAATL VWLVGITNAINWLDGLDGLAAGVAGIAAVGLVSVSFSLHQVAAGFLAAALAGCCLGFLRHNFNPARIFMGDGGSYFLGFT LAAISIVGPAKGLTTVSLLLPLLILSLPLADMSAVIMGRLREGRSPFYPDRRHLHHRLLRAGFSHRRTVLLIYVFTQWLA ALALVVANAEMRFLWLALATAILVATVVISRRQRSAEGAFVDPSSSLAAPSDPRAYRDGHG
Specific function: Catalyzes the formation of undecaprenyl-PP-N- acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to t
COG id: COG0472
COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1790218, Length=290, Percent_Identity=30.6896551724138, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000715 - InterPro: IPR018480 [H]
Pfam domain/function: PF00953 Glycos_transf_4 [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 40291; Mature: 40160
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLASSPFAFATASFVMAAVLTTLVVPLVRALGLHLGLTDQPDSRKQHSTPMVRLGGIAM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHH VLGFGLALAVTWGLGGFGLLAPAKDQLIWSTLAGALCFFVIGLADDLFALSPWPRLAGQV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVAFAMWTQGVRIGTIEFPWLGEGSSSLIALPDLLSLAATLVWLVGITNAINWLDGLDGL HHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGVAGIAAVGLVSVSFSLHQVAAGFLAAALAGCCLGFLRHNFNPARIFMGDGGSYFLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH TLAAISIVGPAKGLTTVSLLLPLLILSLPLADMSAVIMGRLREGRSPFYPDRRHLHHRLL HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RAGFSHRRTVLLIYVFTQWLAALALVVANAEMRFLWLALATAILVATVVISRRQRSAEGA HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FVDPSSSLAAPSDPRAYRDGHG EECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLASSPFAFATASFVMAAVLTTLVVPLVRALGLHLGLTDQPDSRKQHSTPMVRLGGIAM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHH VLGFGLALAVTWGLGGFGLLAPAKDQLIWSTLAGALCFFVIGLADDLFALSPWPRLAGQV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVAFAMWTQGVRIGTIEFPWLGEGSSSLIALPDLLSLAATLVWLVGITNAINWLDGLDGL HHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGVAGIAAVGLVSVSFSLHQVAAGFLAAALAGCCLGFLRHNFNPARIFMGDGGSYFLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH TLAAISIVGPAKGLTTVSLLLPLLILSLPLADMSAVIMGRLREGRSPFYPDRRHLHHRLL HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RAGFSHRRTVLLIYVFTQWLAALALVVANAEMRFLWLALATAILVATVVISRRQRSAEGA HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FVDPSSSLAAPSDPRAYRDGHG EECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-Acetyl-D-Glucosamine; Undecaprenyl Phosphate [C]
Specific reaction: UDP-N-Acetyl-D-Glucosamine + Undecaprenyl Phosphate = UMP + Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12101296; 9384377 [H]