| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024110
Identifier: 124024110
GI number: 124024110
Start: 2129779
End: 2131416
Strand: Reverse
Name: 124024110
Synonym: P9303_24191
Alternate gene names: NA
Gene position: 2131416-2129779 (Counterclockwise)
Preceding gene: 124024111
Following gene: 124024109
Centisome position: 79.45
GC content: 45.18
Gene sequence:
>1638_bases ATGCAGCAGCTGCAGTCAGCAGTGCAGGCATATCAGGGTAGAGATCTTGACGGTGCTGAGGCAATTTTCAAGCAGATTCT CGCTGTAAATCCAAAGGAGCCAACTGCGCTGCATCTCCTCGGTTGTATTTACAAAGATCGTGGACAACTCCAGCAGGCTG TTGAGTTAATCCAGGCATCTATTCGAGAAGATGAGAGTAATCCAATTCCATTCTTTAATCTTGGCAAGATCCTTGCTATC GCTGGTCAGCATGAGAATGCAGTGGGCGTCTTCCAGGAGTCATTGAAGAGAAACCAGCAGATCCCTGAAACGTGGTTTTG CTTTGCCAATGCTCTGAGGGAGATTGGGAAAACAGAGGAAGCAAAGCGGGCATATCGAAATGCACTGCAATTAAATCCTG CACATGCTGGAGCAGCAGGAAATTTAGGAGCACTGCTCACCGATGATGGTGAGTTGGATGAGGCTGAAAAGGTATTGAGA AGGGCATTAGCGAGTAATCCTGAGGATATAAATTGCCTTGTAAATCTAGGCATTTTATTGAAGGAAGAGGGAGAGTTTGA AGAAGCGATCGCAAGTTATCGGAAGGCGATTGAGGTGAAGCCTGATTTTGTAGATGCGTATTTGAATCTGGGGGGTGTGT TGAAAGATGTTGGGAGGATGGATGAGGTGAGGCAAATTGTTGCGGCTCTTCGCCAGATGAAGTCTCTAGAGGATGAGACT TTGGTCGCTATTCAAGATAAGACGTTAGTTTTTGATTGGCATCATAGAAGAGCTTTAAGTCTTTTCTGTGAAGTTGAGCT TGCTGCTGCCTTTTCTGGAATGGAATCCTCCTCTCATTTTGATGCTGTAAAGCAAGTTGATGCTCTCTGCTTTCCTGCTT CATTCCTAGGAGAGCAGATTGCTTGTGAAGAGGGCAAGCTGTTGTATGAAAAGGGGTATTTGGTTGACGAAGGTCTGGTT TCCGCAGACTTATGTGCTCAGCTCATAAGTCAATTCAATAATCGGAATGAGCGGATGAGTGCTGCGCTTATTGAAACGGT TTTGGCTGATGGTGTGTTGCGATCTGTTTTGGAGAGAATATCTTTGCACACGGGTTTCCCGCATTTGATTTGGAATTGTA TATATTTCACCAAGGGTCCCGATGATGAGGCAGTGTCTGATGCTTGGCATTACGACAATCATTACAATGTTTGGACTCCA AAGCTCATGATTTACCTTAATTCTCAGCGAGAAGAGGGTGGAGCTACGCATTTTGTTGACGCAGCTCTCTCGCGGCAAAT ATCCGAGAAATCAGATTATATGGGTCTTGTCTTTCAGCGTGAATCTTATTCGGACCGAGTTAAAGGATTGGTTGAAGAGC TAAATATTGATCCTGTCACGCTTGATCCTGAGCATTATGTCTTTTCTCCCGAGAGGGCAGGGTCGGGTGTCTGGTTTTGT CCCGCCAGATCATTGCATCGAGGCGTCAGCCCTAAGAAAGGTGTTAGGCAAGTGCTTTCTTTTTCATTGACTCCTTTACC CCGTGATTGCGGCTGGTCTGTTGATCAGTGTGTTGAGAAATCAATTGAAATTCTGAAGGATAAAATTGAAAAGGGTAGGC AAAAAGATGATGTCAATCCCTATTGGACTGCTGCCTAG
Upstream 100 bases:
>100_bases GATCGTAAGGGTCACTAGAGACCATTTGGCAGTGAAGAGGGGTAAGAAGTTGCCTTAAAATTGCATAAGCGAGAGATGCC TGGTGAATCAAGAGGAGATC
Downstream 100 bases:
>100_bases GGTGTCTATGCCTAAGCCAGAAAGCAAGCCAGTTTGGGAGTTATGGAGGCACTACCGCTGAGTTTCTTCTGCCGCCCTGC CGAGGTAGTGGGACCAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQIACEEGKLLYEKGYLVDEGLV SADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERISLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTP KLMIYLNSQREEGGATHFVDAALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNPYWTAA
Sequences:
>Translated_545_residues MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQIACEEGKLLYEKGYLVDEGLV SADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERISLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTP KLMIYLNSQREEGGATHFVDAALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNPYWTAA >Mature_545_residues MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQIACEEGKLLYEKGYLVDEGLV SADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERISLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTP KLMIYLNSQREEGGATHFVDAALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNPYWTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=306, Percent_Identity=29.4117647058824, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI32307148, Length=306, Percent_Identity=29.4117647058824, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI118766328, Length=203, Percent_Identity=27.0935960591133, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI118766330, Length=203, Percent_Identity=27.0935960591133, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI22749211, Length=121, Percent_Identity=36.3636363636364, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI301336134, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI83415184, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115532692, Length=240, Percent_Identity=25.8333333333333, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI115532690, Length=240, Percent_Identity=25.8333333333333, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI25147174, Length=202, Percent_Identity=25.2475247524752, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17647755, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24585827, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24585829, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24647123, Length=215, Percent_Identity=25.5813953488372, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI281364285, Length=113, Percent_Identity=37.1681415929204, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24581187, Length=113, Percent_Identity=37.1681415929204, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI19920486, Length=137, Percent_Identity=29.9270072992701, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI161076610, Length=137, Percent_Identity=29.9270072992701, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 60948; Mature: 60948
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQAS CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREDESNPIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEE HHCCCCCCCCCEECCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH AKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILL HHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEHEEECCEEE KEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQI EEEEECCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHH ACEEGKLLYEKGYLVDEGLVSADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERI CCCCCCEEEECCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTPKLMIYLNSQREEGGATHFVD HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCHHHHH AALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCEEEC PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNP CCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC YWTAA CCCCC >Mature Secondary Structure MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQAS CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREDESNPIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEE HHCCCCCCCCCEECCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH AKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILL HHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEHEEECCEEE KEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQI EEEEECCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHH ACEEGKLLYEKGYLVDEGLVSADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERI CCCCCCEEEECCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTPKLMIYLNSQREEGGATHFVD HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCHHHHH AALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCEEEC PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNP CCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC YWTAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]