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The map label for this gene is ndhN

Identifier: 124023994

GI number: 124023994

Start: 2033321

End: 2033782

Strand: Reverse

Name: ndhN

Synonym: P9303_23011

Alternate gene names: 124023994

Gene position: 2033782-2033321 (Counterclockwise)

Preceding gene: 124024007

Following gene: 124023993

Centisome position: 75.81

GC content: 56.93

Gene sequence:

>462_bases
ATGCCGCTGTTGCTTTCTGGTCGGGTGTTTCGCCGTGACCTGGATGCTTGCGGCTGTCTGGCCATGCATGTTCCCCTTGA
AGGTGGCAGTGAAACCCGTTTGCTGCGAAGGCTTCGGGCTGCTGGATACCGCACCCAGCTGAGCTCAGCTCGGGGGCTTG
GCGATCCGGAGGTGTTTCTTTTTCAGCTGCACGGTATTCGGCCTCCCCATCTCGGGCATCAAAGCGTTGGGCGCAATGGA
GCTGTCGGTGAGGTTCAGCAGGTGATGCCCCAGCTGGCTGAATTATTTGTCGACAATGTTCCTGTGGTGCTCTGGCTTTT
GGAGGGGCAGGTGCTTTCAAGATCTGAGCTCTTGGCGCTTTGTGATCTTTGTAAGCGTGAGTCGCGTTTACGGGTCGTTG
TTGAGATGGGTGGTGCTCGCAGTTTGAATTGGCAGCCGATGTCCACTTTGCTCGGGGTCTGA

Upstream 100 bases:

>100_bases
CAGAAATACGAACCAAACCAAGACTTTACACCACTACTTATGCCAATTAAATATTTTCCGAACCTGCTGGCAGACTCATG
GCTACTTGAGTGATGTCGTC

Downstream 100 bases:

>100_bases
ACACTATTCCTTCTAACCCTTTCCAGCAGAGTGCTCTTCGCGGTGAGCTCGCCCTGGCCAGTGGGTCTTGGGTGAAGTTG
ATCTGTGGTGCCAGCAATCA

Product: NADH dehydrogenase I subunit N

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit N; NDH-1 subunit N; NDH-N

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPLLLSGRVFRRDLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFQLHGIRPPHLGHQSVGRNG
AVGEVQQVMPQLAELFVDNVPVVLWLLEGQVLSRSELLALCDLCKRESRLRVVVEMGGARSLNWQPMSTLLGV

Sequences:

>Translated_153_residues
MPLLLSGRVFRRDLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFQLHGIRPPHLGHQSVGRNG
AVGEVQQVMPQLAELFVDNVPVVLWLLEGQVLSRSELLALCDLCKRESRLRVVVEMGGARSLNWQPMSTLLGV
>Mature_152_residues
PLLLSGRVFRRDLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFQLHGIRPPHLGHQSVGRNGA
VGEVQQVMPQLAELFVDNVPVVLWLLEGQVLSRSELLALCDLCKRESRLRVVVEMGGARSLNWQPMSTLLGV

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhN subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHN_PROM3 (A2CC26)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001018301.1
- STRING:   A2CC26
- GeneID:   4776056
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_23011
- eggNOG:   NOG07076
- HOGENOM:   HBG317155
- OMA:   RPPHLGH
- ProtClustDB:   CLSK893132
- GO:   GO:0006810
- HAMAP:   MF_01353
- InterPro:   IPR020874

Pfam domain/function: PF11909 NdhN

EC number: 1.6.5.3

Molecular weight: Translated: 16863; Mature: 16732

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLLSGRVFRRDLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFL
CCEEECCHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEEE
FQLHGIRPPHLGHQSVGRNGAVGEVQQVMPQLAELFVDNVPVVLWLLEGQVLSRSELLAL
EEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH
CDLCKRESRLRVVVEMGGARSLNWQPMSTLLGV
HHHHCCCCCEEEEEEECCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
PLLLSGRVFRRDLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFL
CEEECCHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEEE
FQLHGIRPPHLGHQSVGRNGAVGEVQQVMPQLAELFVDNVPVVLWLLEGQVLSRSELLAL
EEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH
CDLCKRESRLRVVVEMGGARSLNWQPMSTLLGV
HHHHCCCCCEEEEEEECCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA