Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023704

Identifier: 124023704

GI number: 124023704

Start: 1761137

End: 1763878

Strand: Direct

Name: 124023704

Synonym: P9303_20041

Alternate gene names: NA

Gene position: 1761137-1763878 (Clockwise)

Preceding gene: 124023703

Following gene: 124023705

Centisome position: 65.65

GC content: 58.83

Gene sequence:

>2742_bases
ATGCAGAACTTCACTGATTGGTTTAAGCCCTACCTGCTTTCGGATCAAAACGGACTGAACACGAGCGCGCTTCTCGATGA
ATTTTCCGACCTGGCCGGAAGCAGCCTCAAGGGACTTAGCCGCAATGAAGAGCGCATCGTCGATGCCTGCCTCCATGCCG
TGCTCTGGGGATATCCCCTAGCCGAGACCTACCGCTACCGGCAGCTCGGCACCAAAGTGCAGGCTAAGGAGAACATGCTG
TTCAAGCCCAGTTCCGTAGCGAGCTGGCTGAACAAGAATTCAGCCCCGGCCCCCAACGCCTCGGTGCTCTACGTCACAAG
CTGGCTGAATCTCAACAAAGGGGATCGCATCCTCCAGACACCAGCCAACACCGACGAGAATTACTACATCTGGGCGATCC
TCGATAGCTACATCAACACCGTCGGATCGATCGGCCCGCGGACCCAATCCAAGTCCAACGCGACTCAGGATTCCCCCAAC
TACTACCTGCTAGCCGGCCCCTCGAGCCCTTACTACAGCGGCAACGACTGGCTCACGACCCTGAGAACAATGCAGGGTAA
CCGCACTGTCAGGATCATCAGGGTCGACACGCCCTACGCCTGGGTTACCGCGAGATTCGGCAGCGACACCCTCAGTGAAT
CCGCACTAGCCAACACCCACGACTTCATCAACGGTGCTGAAGACATTGCCGGCAGCGGCTTTCAGATCACCTCCATCGAC
CACTTCCAGCGCACAGGCTCGGTGCCCTATCAAGAACCGATCAGCCAGAGCAGCACCAATCAAAAAGCTGAAAAAGCTCA
AAAGAAGTGGGGATCGATTCCGAGCACCGCCAAGGGCTTCTTCGATCAACTGGGAACAGCCCTGCAAGACAGCCCTGTGC
CGGCCCAGATCAAGCCTGGAACATTCACCAACATCCCGGACGAGGCCATCTGGCTGGGTAATCAGAACAAGGTGCAGAAC
GCACTGGGCGGCGACCACTATCTACCAACCAGCAGCTATCAACCGAGTTCCGCCCTTTCCAACAGCCAAACCAAAGCACT
GAATAAGCGCTTCAGCACGATCGGCCTAAACCTGAGCAGGGGTTTCACCATGCCCAGCGACTGGAACAGCCGCGACCGAG
AAATCTTCGAGGAGTCCTATCTATTTAGCAACAAGCTGCTGAGCAAGGCCACAACAACGATTGCCTCCGGTGCAAAAGCA
ACTAACTACTGGCACATCGGCAACTACAACATGGGCGTTTATCCCAACACCTGGCACAACTGGCTGGTGCGCTGTGGTGT
GGCGATCGATGGCGGGGCCGCCAACATTCCCAATGACGGCGTCTATCCCACCACCCAGCGGGACCATAACGGCTACAAAC
TGAGCTCCCGCTACAACTACTCAATTACCCTGCCGCCCCTGAGCGAAGAACTAGGAGGCACCACCTACGGCCCAGCCAAT
GGGTTCTGGTCGTTCACGATCTATCAACCCAATGCTGGCAGCGCTTACCAGCCGTTCCTTGTCGAGAACGCCATCAACAA
CCTGGCCTACACCAGCATCGATGCCAGGGCGACGCTCACCGCCAATGGCTGGCTGCGCACCGCCAAGCCCGACAATTGGA
ACAACTCCACCGCAAAAGGCACAGCCCTACGCACCGGCGTCGACGGGAACATCGAGGGCCTTGACGCCGAAACCACCTAC
TACGTGCAGGCCACCCGCAGGGATCACAGCGATGAGAACAACCTGCTGATCAAACTTTCAGCCAGCTATGAGCCCTCCTA
CAACGTGGTCAAAGGAACCCCTGGCGTGCCTATCGGGGGCCAAGGTTCGCCTGGGCCAGCGATCGACCTTTCGGCTACAG
CAGAAGGCAGCAGCCTGTCGTTCGGATGGATTCAACCGGTGGCACAGCTGGGATCCCCGCAACAGGACAGGCTGGAGGTT
GATGAAGATGGCAAGATCGTGCTTGAGCTTCGCGCCGACCAGCCCAGCAGCGCGCGGACTAACTGGCTGCCGACCCCAAA
TAGCGGGTGGGGCCGCGCCGCCCACGACTTTCAAGTGATGGCACGCTACTACGAGCCCACGGCGGACAACCCCACAATCC
TGGCGGCCGTGAAGCATCTCGGTCGCGACGATATCGACGGATCCATACCCTATATCCCACCTCCTGTGGAGCGCAAATCC
CTGCGCCGACTCAGCATCTGGGAACAGTTGGATGACGCAGGACGAACCCTGCTCCAGCAGCGCACCGGCAACAACACGGT
TGATCCTTTGAGCGGCACTGATCGCTTCGATGCAGACGCGGTGGGCGCCATACTCGATCTGCGCTGGGCGAATGGCGCCC
TCGAAGGCAGCAACTGGGACATCCGCTACGACTACAGCCGCAATGCGGACTACATCAACGAACTGTTCTTCTACCGCGTC
GACGATGTCACCGGCCTGGTGAATGATCTTCGCCCAGGTGATTCCGGCTACAAGGCCGCCGCCCTGGCCCGACGGGTGAA
TGCCGATCAGCCGATCAACAATGCAACGAACAACAGCACCTATTCAGGCACGCTGCGACTCGAGGGCGGGGCGATCTACA
TGCCGCTGGTGCGCACGGATGCCGGAGAACTACTCCTGCCCAATGCCCGCAGCACCGGGAACGTCTCGCTGTTCTCCCTC
GTAGGAAGCGATGCCTTCGCCTTCGATGATCAGCTCAGCAGCGGCGATCAACACAACAATGACGGACTGTTCAGGGTGAC
AGGACTCACCCCAGTGGCCTGA

Upstream 100 bases:

>100_bases
CAAAGACTATGGCCTTATCGATCGTGTGATTGCCCACCCGAACGAAGCCTGAAAGTCCTGCCAACCGAAGCCAAAAACCA
AGCCGCCATAACAATCAGGC

Downstream 100 bases:

>100_bases
GTCAGAGGCGGTCTGGAGGCATCCAGATGGACCGGAAACTTACGACCAAGGCCAATTACGTAAGGTGAAGAGATACCCAG
ATCAACGATCACGCCAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 913; Mature: 913

Protein sequence:

>913_residues
MQNFTDWFKPYLLSDQNGLNTSALLDEFSDLAGSSLKGLSRNEERIVDACLHAVLWGYPLAETYRYRQLGTKVQAKENML
FKPSSVASWLNKNSAPAPNASVLYVTSWLNLNKGDRILQTPANTDENYYIWAILDSYINTVGSIGPRTQSKSNATQDSPN
YYLLAGPSSPYYSGNDWLTTLRTMQGNRTVRIIRVDTPYAWVTARFGSDTLSESALANTHDFINGAEDIAGSGFQITSID
HFQRTGSVPYQEPISQSSTNQKAEKAQKKWGSIPSTAKGFFDQLGTALQDSPVPAQIKPGTFTNIPDEAIWLGNQNKVQN
ALGGDHYLPTSSYQPSSALSNSQTKALNKRFSTIGLNLSRGFTMPSDWNSRDREIFEESYLFSNKLLSKATTTIASGAKA
TNYWHIGNYNMGVYPNTWHNWLVRCGVAIDGGAANIPNDGVYPTTQRDHNGYKLSSRYNYSITLPPLSEELGGTTYGPAN
GFWSFTIYQPNAGSAYQPFLVENAINNLAYTSIDARATLTANGWLRTAKPDNWNNSTAKGTALRTGVDGNIEGLDAETTY
YVQATRRDHSDENNLLIKLSASYEPSYNVVKGTPGVPIGGQGSPGPAIDLSATAEGSSLSFGWIQPVAQLGSPQQDRLEV
DEDGKIVLELRADQPSSARTNWLPTPNSGWGRAAHDFQVMARYYEPTADNPTILAAVKHLGRDDIDGSIPYIPPPVERKS
LRRLSIWEQLDDAGRTLLQQRTGNNTVDPLSGTDRFDADAVGAILDLRWANGALEGSNWDIRYDYSRNADYINELFFYRV
DDVTGLVNDLRPGDSGYKAAALARRVNADQPINNATNNSTYSGTLRLEGGAIYMPLVRTDAGELLLPNARSTGNVSLFSL
VGSDAFAFDDQLSSGDQHNNDGLFRVTGLTPVA

Sequences:

>Translated_913_residues
MQNFTDWFKPYLLSDQNGLNTSALLDEFSDLAGSSLKGLSRNEERIVDACLHAVLWGYPLAETYRYRQLGTKVQAKENML
FKPSSVASWLNKNSAPAPNASVLYVTSWLNLNKGDRILQTPANTDENYYIWAILDSYINTVGSIGPRTQSKSNATQDSPN
YYLLAGPSSPYYSGNDWLTTLRTMQGNRTVRIIRVDTPYAWVTARFGSDTLSESALANTHDFINGAEDIAGSGFQITSID
HFQRTGSVPYQEPISQSSTNQKAEKAQKKWGSIPSTAKGFFDQLGTALQDSPVPAQIKPGTFTNIPDEAIWLGNQNKVQN
ALGGDHYLPTSSYQPSSALSNSQTKALNKRFSTIGLNLSRGFTMPSDWNSRDREIFEESYLFSNKLLSKATTTIASGAKA
TNYWHIGNYNMGVYPNTWHNWLVRCGVAIDGGAANIPNDGVYPTTQRDHNGYKLSSRYNYSITLPPLSEELGGTTYGPAN
GFWSFTIYQPNAGSAYQPFLVENAINNLAYTSIDARATLTANGWLRTAKPDNWNNSTAKGTALRTGVDGNIEGLDAETTY
YVQATRRDHSDENNLLIKLSASYEPSYNVVKGTPGVPIGGQGSPGPAIDLSATAEGSSLSFGWIQPVAQLGSPQQDRLEV
DEDGKIVLELRADQPSSARTNWLPTPNSGWGRAAHDFQVMARYYEPTADNPTILAAVKHLGRDDIDGSIPYIPPPVERKS
LRRLSIWEQLDDAGRTLLQQRTGNNTVDPLSGTDRFDADAVGAILDLRWANGALEGSNWDIRYDYSRNADYINELFFYRV
DDVTGLVNDLRPGDSGYKAAALARRVNADQPINNATNNSTYSGTLRLEGGAIYMPLVRTDAGELLLPNARSTGNVSLFSL
VGSDAFAFDDQLSSGDQHNNDGLFRVTGLTPVA
>Mature_913_residues
MQNFTDWFKPYLLSDQNGLNTSALLDEFSDLAGSSLKGLSRNEERIVDACLHAVLWGYPLAETYRYRQLGTKVQAKENML
FKPSSVASWLNKNSAPAPNASVLYVTSWLNLNKGDRILQTPANTDENYYIWAILDSYINTVGSIGPRTQSKSNATQDSPN
YYLLAGPSSPYYSGNDWLTTLRTMQGNRTVRIIRVDTPYAWVTARFGSDTLSESALANTHDFINGAEDIAGSGFQITSID
HFQRTGSVPYQEPISQSSTNQKAEKAQKKWGSIPSTAKGFFDQLGTALQDSPVPAQIKPGTFTNIPDEAIWLGNQNKVQN
ALGGDHYLPTSSYQPSSALSNSQTKALNKRFSTIGLNLSRGFTMPSDWNSRDREIFEESYLFSNKLLSKATTTIASGAKA
TNYWHIGNYNMGVYPNTWHNWLVRCGVAIDGGAANIPNDGVYPTTQRDHNGYKLSSRYNYSITLPPLSEELGGTTYGPAN
GFWSFTIYQPNAGSAYQPFLVENAINNLAYTSIDARATLTANGWLRTAKPDNWNNSTAKGTALRTGVDGNIEGLDAETTY
YVQATRRDHSDENNLLIKLSASYEPSYNVVKGTPGVPIGGQGSPGPAIDLSATAEGSSLSFGWIQPVAQLGSPQQDRLEV
DEDGKIVLELRADQPSSARTNWLPTPNSGWGRAAHDFQVMARYYEPTADNPTILAAVKHLGRDDIDGSIPYIPPPVERKS
LRRLSIWEQLDDAGRTLLQQRTGNNTVDPLSGTDRFDADAVGAILDLRWANGALEGSNWDIRYDYSRNADYINELFFYRV
DDVTGLVNDLRPGDSGYKAAALARRVNADQPINNATNNSTYSGTLRLEGGAIYMPLVRTDAGELLLPNARSTGNVSLFSL
VGSDAFAFDDQLSSGDQHNNDGLFRVTGLTPVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100080; Mature: 100080

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFTDWFKPYLLSDQNGLNTSALLDEFSDLAGSSLKGLSRNEERIVDACLHAVLWGYPL
CCCCHHHHCCEEECCCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCH
AETYRYRQLGTKVQAKENMLFKPSSVASWLNKNSAPAPNASVLYVTSWLNLNKGDRILQT
HHHHHHHHHCCEEECCCCEEECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEEC
PANTDENYYIWAILDSYINTVGSIGPRTQSKSNATQDSPNYYLLAGPSSPYYSGNDWLTT
CCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
LRTMQGNRTVRIIRVDTPYAWVTARFGSDTLSESALANTHDFINGAEDIAGSGFQITSID
HHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEH
HFQRTGSVPYQEPISQSSTNQKAEKAQKKWGSIPSTAKGFFDQLGTALQDSPVPAQIKPG
HHHHCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEECCC
TFTNIPDEAIWLGNQNKVQNALGGDHYLPTSSYQPSSALSNSQTKALNKRFSTIGLNLSR
CCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHEEEEHHC
GFTMPSDWNSRDREIFEESYLFSNKLLSKATTTIASGAKATNYWHIGNYNMGVYPNTWHN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHH
WLVRCGVAIDGGAANIPNDGVYPTTQRDHNGYKLSSRYNYSITLPPLSEELGGTTYGPAN
HHEEECEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHCCCCCCCCC
GFWSFTIYQPNAGSAYQPFLVENAINNLAYTSIDARATLTANGWLRTAKPDNWNNSTAKG
CEEEEEEECCCCCCCCCCHHHHHHHHHCEEEECCCEEEEEECCEEEECCCCCCCCCCCCC
TALRTGVDGNIEGLDAETTYYVQATRRDHSDENNLLIKLSASYEPSYNVVKGTPGVPIGG
CEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCC
QGSPGPAIDLSATAEGSSLSFGWIQPVAQLGSPQQDRLEVDEDGKIVLELRADQPSSART
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHCEEECCCCCEEEEEECCCCCCCCC
NWLPTPNSGWGRAAHDFQVMARYYEPTADNPTILAAVKHLGRDDIDGSIPYIPPPVERKS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
LRRLSIWEQLDDAGRTLLQQRTGNNTVDPLSGTDRFDADAVGAILDLRWANGALEGSNWD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCE
IRYDYSRNADYINELFFYRVDDVTGLVNDLRPGDSGYKAAALARRVNADQPINNATNNST
EEEECCCCHHHHHHHHEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCE
YSGTLRLEGGAIYMPLVRTDAGELLLPNARSTGNVSLFSLVGSDAFAFDDQLSSGDQHNN
EEEEEEECCCEEEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCEEECCHHCCCCCCCC
DGLFRVTGLTPVA
CCEEEEECCCCCC
>Mature Secondary Structure
MQNFTDWFKPYLLSDQNGLNTSALLDEFSDLAGSSLKGLSRNEERIVDACLHAVLWGYPL
CCCCHHHHCCEEECCCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCH
AETYRYRQLGTKVQAKENMLFKPSSVASWLNKNSAPAPNASVLYVTSWLNLNKGDRILQT
HHHHHHHHHCCEEECCCCEEECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEEC
PANTDENYYIWAILDSYINTVGSIGPRTQSKSNATQDSPNYYLLAGPSSPYYSGNDWLTT
CCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
LRTMQGNRTVRIIRVDTPYAWVTARFGSDTLSESALANTHDFINGAEDIAGSGFQITSID
HHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEH
HFQRTGSVPYQEPISQSSTNQKAEKAQKKWGSIPSTAKGFFDQLGTALQDSPVPAQIKPG
HHHHCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEECCC
TFTNIPDEAIWLGNQNKVQNALGGDHYLPTSSYQPSSALSNSQTKALNKRFSTIGLNLSR
CCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHEEEEHHC
GFTMPSDWNSRDREIFEESYLFSNKLLSKATTTIASGAKATNYWHIGNYNMGVYPNTWHN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHH
WLVRCGVAIDGGAANIPNDGVYPTTQRDHNGYKLSSRYNYSITLPPLSEELGGTTYGPAN
HHEEECEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHCCCCCCCCC
GFWSFTIYQPNAGSAYQPFLVENAINNLAYTSIDARATLTANGWLRTAKPDNWNNSTAKG
CEEEEEEECCCCCCCCCCHHHHHHHHHCEEEECCCEEEEEECCEEEECCCCCCCCCCCCC
TALRTGVDGNIEGLDAETTYYVQATRRDHSDENNLLIKLSASYEPSYNVVKGTPGVPIGG
CEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCC
QGSPGPAIDLSATAEGSSLSFGWIQPVAQLGSPQQDRLEVDEDGKIVLELRADQPSSART
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHCEEECCCCCEEEEEECCCCCCCCC
NWLPTPNSGWGRAAHDFQVMARYYEPTADNPTILAAVKHLGRDDIDGSIPYIPPPVERKS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
LRRLSIWEQLDDAGRTLLQQRTGNNTVDPLSGTDRFDADAVGAILDLRWANGALEGSNWD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCE
IRYDYSRNADYINELFFYRVDDVTGLVNDLRPGDSGYKAAALARRVNADQPINNATNNST
EEEECCCCHHHHHHHHEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCE
YSGTLRLEGGAIYMPLVRTDAGELLLPNARSTGNVSLFSLVGSDAFAFDDQLSSGDQHNN
EEEEEEECCCEEEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCEEECCHHCCCCCCCC
DGLFRVTGLTPVA
CCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA