Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023666

Identifier: 124023666

GI number: 124023666

Start: 1731498

End: 1731758

Strand: Direct

Name: 124023666

Synonym: P9303_19661

Alternate gene names: NA

Gene position: 1731498-1731758 (Clockwise)

Preceding gene: 124023665

Following gene: 124023668

Centisome position: 64.54

GC content: 46.36

Gene sequence:

>261_bases
GTGGTTGTGGCCTTAACCATCAAATTGGATCATCGACAAAGCCACGGATATCTAGCTCAGAGGCAGAACAGCACTAACCC
CCACCCAACCCAACTTTCTCTCATTCAAAGCAGAACAGGAGCAAAAAATCGCAAACCTTCTCCTTGCGCTCGGCTTAGCC
AACCAGAAAGACACCAATCAGCTGCAGTAATCAAGCTGAGCTGGCATACAACTTTGATTCCCAAATCCTTGAACAAGACT
TGCCTCAACATTGGAGATTAA

Upstream 100 bases:

>100_bases
TCCGTTGCAAATCATGCAAGTAGGCTTGATTCGGATGTGGCTATGGATACGAGCATCAACAGGTGCTTAAGCAAAGATTG
CTCCAGTCTTTGTGGTGTGA

Downstream 100 bases:

>100_bases
TCTATATCCGATCTCAATCAATGAGACCGATAAATTGTCTATTTAACCGACCCAACCATCACATCCAAGCCTGCGTATAT
GCATGGCAATCAGTGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MVVALTIKLDHRQSHGYLAQRQNSTNPHPTQLSLIQSRTGAKNRKPSPCARLSQPERHQSAAVIKLSWHTTLIPKSLNKT
CLNIGD

Sequences:

>Translated_86_residues
MVVALTIKLDHRQSHGYLAQRQNSTNPHPTQLSLIQSRTGAKNRKPSPCARLSQPERHQSAAVIKLSWHTTLIPKSLNKT
CLNIGD
>Mature_86_residues
MVVALTIKLDHRQSHGYLAQRQNSTNPHPTQLSLIQSRTGAKNRKPSPCARLSQPERHQSAAVIKLSWHTTLIPKSLNKT
CLNIGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9590; Mature: 9590

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVALTIKLDHRQSHGYLAQRQNSTNPHPTQLSLIQSRTGAKNRKPSPCARLSQPERHQS
CEEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
AAVIKLSWHTTLIPKSLNKTCLNIGD
EEEEEEECCEEECCCCCCCCEEECCC
>Mature Secondary Structure
MVVALTIKLDHRQSHGYLAQRQNSTNPHPTQLSLIQSRTGAKNRKPSPCARLSQPERHQS
CEEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
AAVIKLSWHTTLIPKSLNKTCLNIGD
EEEEEEECCEEECCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA