| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023668
Identifier: 124023668
GI number: 124023668
Start: 1732601
End: 1733431
Strand: Direct
Name: 124023668
Synonym: P9303_19681
Alternate gene names: NA
Gene position: 1732601-1733431 (Clockwise)
Preceding gene: 124023666
Following gene: 124023669
Centisome position: 64.58
GC content: 33.69
Gene sequence:
>831_bases ATGCATTTCAGCAATAAGAAAAATATATTTTCTATGATCGATTCTATTACATTAGTCATCTCATCTCAAAGATCAGGATC AACATTGTTGTGCCGAGACATAGAAAGCCTAGCTGGCATGGGTTTGCCAAAAGAATACTTTACTTATTTCTTTAAAAAAA GGCAAAGGGTTAAAGAATTACTTGGAAAGTATAGCGAGAGTGATGTTATTTCCATGATACAAAAAGGCTGTATTTCTTCA CATCCGAATATTGGCGCAGTTAAATTAATGGTTGATCAGGCGCCTAAAGTGGACAGTTTAATTAGACAAGATGCTGCTGT GGATAACGAAATAGCAATTGACAATATAATTACCTGGGCATTCAATAAATTCTCAAGGGTTAATCTTATCTTTTTAACAA GGAATGTTATAGATCAGGCAATATCAAGAGCCATAAGCAAGCATAGTGATATATGGCATTATGAGCTTGATGGAACAAGA AGAAAGAATGAAAGATGGGTAGACAAAAGACCTGATTACAATTTGAACTTATCTCAAGAAGAGATTAGCATGATGGTTAT TTCGGAACTACCAGATGTGGTATTGCATTCAGGAATAATAAAAAGACTGGCGAAAAAATATTCGAAAGAATCGATTCTAA TTGACTATGAATCTCTTATCTCAAATCCAGAAGGCTGCTGGAAACAGCTAATATTTCACGCTAAAAAATTTGGGTTTGCC CCCCCAAATCAAAAAGCAAAGAGAACGTTGAGAAAATTAATCTCGCCAGAAATGAATATAGATATAAAACAAGGATTAAA GAGTTATTTATTGACTAACATAAATCTGTAA
Upstream 100 bases:
>100_bases ACCTCTTTTACTCTTCAAAGAAATAAGTAAAGAATTCTTTCCGCATTGGGCAACCTATAGTCTCAATAAATTACAATCTA ACAACAATCATACGAGCAGG
Downstream 100 bases:
>100_bases GTTGGTCAAAAAAACGCATTATTATCAGTATCTCCAGCAGCATGATCTAAACATCGATCCCTGTTCCAAGACGTTCAGGC ATAGTGCGTCCCCATTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MHFSNKKNIFSMIDSITLVISSQRSGSTLLCRDIESLAGMGLPKEYFTYFFKKRQRVKELLGKYSESDVISMIQKGCISS HPNIGAVKLMVDQAPKVDSLIRQDAAVDNEIAIDNIITWAFNKFSRVNLIFLTRNVIDQAISRAISKHSDIWHYELDGTR RKNERWVDKRPDYNLNLSQEEISMMVISELPDVVLHSGIIKRLAKKYSKESILIDYESLISNPEGCWKQLIFHAKKFGFA PPNQKAKRTLRKLISPEMNIDIKQGLKSYLLTNINL
Sequences:
>Translated_276_residues MHFSNKKNIFSMIDSITLVISSQRSGSTLLCRDIESLAGMGLPKEYFTYFFKKRQRVKELLGKYSESDVISMIQKGCISS HPNIGAVKLMVDQAPKVDSLIRQDAAVDNEIAIDNIITWAFNKFSRVNLIFLTRNVIDQAISRAISKHSDIWHYELDGTR RKNERWVDKRPDYNLNLSQEEISMMVISELPDVVLHSGIIKRLAKKYSKESILIDYESLISNPEGCWKQLIFHAKKFGFA PPNQKAKRTLRKLISPEMNIDIKQGLKSYLLTNINL >Mature_276_residues MHFSNKKNIFSMIDSITLVISSQRSGSTLLCRDIESLAGMGLPKEYFTYFFKKRQRVKELLGKYSESDVISMIQKGCISS HPNIGAVKLMVDQAPKVDSLIRQDAAVDNEIAIDNIITWAFNKFSRVNLIFLTRNVIDQAISRAISKHSDIWHYELDGTR RKNERWVDKRPDYNLNLSQEEISMMVISELPDVVLHSGIIKRLAKKYSKESILIDYESLISNPEGCWKQLIFHAKKFGFA PPNQKAKRTLRKLISPEMNIDIKQGLKSYLLTNINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31712; Mature: 31712
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFSNKKNIFSMIDSITLVISSQRSGSTLLCRDIESLAGMGLPKEYFTYFFKKRQRVKEL CCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LGKYSESDVISMIQKGCISSHPNIGAVKLMVDQAPKVDSLIRQDAAVDNEIAIDNIITWA HHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH FNKFSRVNLIFLTRNVIDQAISRAISKHSDIWHYELDGTRRKNERWVDKRPDYNLNLSQE HHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH EISMMVISELPDVVLHSGIIKRLAKKYSKESILIDYESLISNPEGCWKQLIFHAKKFGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHCCC PPNQKAKRTLRKLISPEMNIDIKQGLKSYLLTNINL CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MHFSNKKNIFSMIDSITLVISSQRSGSTLLCRDIESLAGMGLPKEYFTYFFKKRQRVKEL CCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LGKYSESDVISMIQKGCISSHPNIGAVKLMVDQAPKVDSLIRQDAAVDNEIAIDNIITWA HHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH FNKFSRVNLIFLTRNVIDQAISRAISKHSDIWHYELDGTRRKNERWVDKRPDYNLNLSQE HHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH EISMMVISELPDVVLHSGIIKRLAKKYSKESILIDYESLISNPEGCWKQLIFHAKKFGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHCCC PPNQKAKRTLRKLISPEMNIDIKQGLKSYLLTNINL CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA