| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is aroA
Identifier: 124023589
GI number: 124023589
Start: 1650365
End: 1651690
Strand: Reverse
Name: aroA
Synonym: P9303_18891
Alternate gene names: 124023589
Gene position: 1651690-1650365 (Counterclockwise)
Preceding gene: 124023590
Following gene: 124023588
Centisome position: 61.57
GC content: 56.11
Gene sequence:
>1326_bases TTGAGCGTTACAAGCACTGCCTCATCGTCACGTGAGCTTCGAGCAGGTGGTGGGCTTTCTGGAACGGTGCGAGTCCCTGG AGATAAATCGATTTCCCATCGAGCGCTGTTATTTGGAGCTATCGCAGAAGGGATCACCACCATCGAGGGCCTTTTACCTG CTGAAGATCCCATGAGTACCGCCGCCTGTCTTCGAGCGATGGGAGCCACGATCAGCCCGATTCATGCCGGGCAAATAGTT CGCGTTGAAGGCGTTGGTCTTGATGGACTTCAAGAACCGCAAGATGTACTCGACTGCGGTAACTCCGGCACAACAATTCG GCTGATGCTAGGGCTGTTGGCAGCAAGCAAGGGCCGCCATTTCGTGCTTAGCGGTGATTCCTCTTTGCGCCGTAGGCCCA TGAATCGGGTTGGCCAGCCATTAACAATGATGGGAGCCAAAATTAAAGGACGATCCAACGGCGACTTCGCACCACTTGCC GTGAGTGGTCAGAAACTTCGTGGTGGTGTCATCGGTACACCTGTAGCAAGTGCCCAGGTGAAGTCAGCCCTGCTGCTGGC AGCCCTTACCGCCGATGGGGCAACGACTGTGATCGAACCAGCCCATTCTAGAGACCACAGCGAACGCATGTTGCGGGCAT TCGGCGCTGATCTCGAAGTGGGAGGAGAGATGGGTCGCCATATCAGAGTGAGCCCAGGACAAAAGCTTTATGGCCAAAAT ATTGTCGTGCCAGGTGATATCAGTTCCGCTGCTTTTTGGCTTGTCGCAGGAGTGCTTGTGCCTGGAGCTGAGCTCGTGGT GGAAAACGTTGGTTTAAACCCCACCCGTACCGGCATCCTGGAAGTGTTGCAGCAAATGGAAGCTCGCATTGAGGTGCTCA ACCGCCATGAAGTCGCCGGTGAACCGGTTGGAGACCTACGGGTGAGGCAAGGACCGTTAAAGCCGTTCAGCATCAATGGG GACATCATTCCTCGCCTGGTCGACGAGGTGCCGATCTTGGCGGTGGCTGCTTGTTTCTGTGATGGTGAAAGCAAAATTAC TGACGCCAGTGAACTGCGCGTCAAGGAAACCGATCGGCTCGCTGTGATGACCAGGCAGCTCACGGCTATGGGAGCAGATA TCGACGAACATGCCGATGGGCTTACCATCCGCGGTGGCCGAACACTGCGAGGCACAGAACTCGATAGTGAAACGGATCAT CGTGTCGCCATGAGCCTGGCGGTGGCTGCGTTGTTGGCGGAGGGCAATTCTCGCTTGACGGGTAGCGAAGCTGCGGCTGT TTCCTACCCCAACTTCTGGGACGACCTTGAGCGGCTGCATCGCTGA
Upstream 100 bases:
>100_bases TTGAGATGGTTCAAAAGAGACAAATTACACAACACAAAAACAAATTGGAAATAAGCTCAAACGCTTGCCCATAAGATCGA TCTGATCCGGGCCACACCCA
Downstream 100 bases:
>100_bases GTCGCTTCCTCTCGGAACGCTGTCTGCTTATGCAACAGCTGACGGCAGTTTCAGCCTGTACAGCAGTCATTTTAACGAGG CCTTTCATAGTTCAGCTGGA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSVTSTASSSRELRAGGGLSGTVRVPGDKSISHRALLFGAIAEGITTIEGLLPAEDPMSTAACLRAMGATISPIHAGQIV RVEGVGLDGLQEPQDVLDCGNSGTTIRLMLGLLAASKGRHFVLSGDSSLRRRPMNRVGQPLTMMGAKIKGRSNGDFAPLA VSGQKLRGGVIGTPVASAQVKSALLLAALTADGATTVIEPAHSRDHSERMLRAFGADLEVGGEMGRHIRVSPGQKLYGQN IVVPGDISSAAFWLVAGVLVPGAELVVENVGLNPTRTGILEVLQQMEARIEVLNRHEVAGEPVGDLRVRQGPLKPFSING DIIPRLVDEVPILAVAACFCDGESKITDASELRVKETDRLAVMTRQLTAMGADIDEHADGLTIRGGRTLRGTELDSETDH RVAMSLAVAALLAEGNSRLTGSEAAAVSYPNFWDDLERLHR
Sequences:
>Translated_441_residues MSVTSTASSSRELRAGGGLSGTVRVPGDKSISHRALLFGAIAEGITTIEGLLPAEDPMSTAACLRAMGATISPIHAGQIV RVEGVGLDGLQEPQDVLDCGNSGTTIRLMLGLLAASKGRHFVLSGDSSLRRRPMNRVGQPLTMMGAKIKGRSNGDFAPLA VSGQKLRGGVIGTPVASAQVKSALLLAALTADGATTVIEPAHSRDHSERMLRAFGADLEVGGEMGRHIRVSPGQKLYGQN IVVPGDISSAAFWLVAGVLVPGAELVVENVGLNPTRTGILEVLQQMEARIEVLNRHEVAGEPVGDLRVRQGPLKPFSING DIIPRLVDEVPILAVAACFCDGESKITDASELRVKETDRLAVMTRQLTAMGADIDEHADGLTIRGGRTLRGTELDSETDH RVAMSLAVAALLAEGNSRLTGSEAAAVSYPNFWDDLERLHR >Mature_440_residues SVTSTASSSRELRAGGGLSGTVRVPGDKSISHRALLFGAIAEGITTIEGLLPAEDPMSTAACLRAMGATISPIHAGQIVR VEGVGLDGLQEPQDVLDCGNSGTTIRLMLGLLAASKGRHFVLSGDSSLRRRPMNRVGQPLTMMGAKIKGRSNGDFAPLAV SGQKLRGGVIGTPVASAQVKSALLLAALTADGATTVIEPAHSRDHSERMLRAFGADLEVGGEMGRHIRVSPGQKLYGQNI VVPGDISSAAFWLVAGVLVPGAELVVENVGLNPTRTGILEVLQQMEARIEVLNRHEVAGEPVGDLRVRQGPLKPFSINGD IIPRLVDEVPILAVAACFCDGESKITDASELRVKETDRLAVMTRQLTAMGADIDEHADGLTIRGGRTLRGTELDSETDHR VAMSLAVAALLAEGNSRLTGSEAAAVSYPNFWDDLERLHR
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=433, Percent_Identity=27.4826789838337, Blast_Score=123, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320332, Length=453, Percent_Identity=27.1523178807947, Blast_Score=124, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_PROM3 (A2CAX1)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001017896.1 - ProteinModelPortal: A2CAX1 - SMR: A2CAX1 - STRING: A2CAX1 - GeneID: 4778688 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_18891 - eggNOG: COG0128 - HOGENOM: HBG646626 - OMA: PAPSRDH - ProtClustDB: PRK02427 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 46396; Mature: 46265
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTSTASSSRELRAGGGLSGTVRVPGDKSISHRALLFGAIAEGITTIEGLLPAEDPMST CCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH AACLRAMGATISPIHAGQIVRVEGVGLDGLQEPQDVLDCGNSGTTIRLMLGLLAASKGRH HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCE FVLSGDSSLRRRPMNRVGQPLTMMGAKIKGRSNGDFAPLAVSGQKLRGGVIGTPVASAQV EEEECCHHHHHCCHHHHCCCHHHHCCEEECCCCCCCCEEEECCCHHCCCCCCCCCHHHHH KSALLLAALTADGATTVIEPAHSRDHSERMLRAFGADLEVGGEMGRHIRVSPGQKLYGQN HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEECCCCCCEEEECCCCHHCCCC IVVPGDISSAAFWLVAGVLVPGAELVVENVGLNPTRTGILEVLQQMEARIEVLNRHEVAG EEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC EPVGDLRVRQGPLKPFSINGDIIPRLVDEVPILAVAACFCDGESKITDASELRVKETDRL CCCCCCEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCEECCCHHH AVMTRQLTAMGADIDEHADGLTIRGGRTLRGTELDSETDHRVAMSLAVAALLAEGNSRLT HHHHHHHHHHCCCHHHCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC GSEAAAVSYPNFWDDLERLHR CCCCCEECCCCHHHHHHHHCC >Mature Secondary Structure SVTSTASSSRELRAGGGLSGTVRVPGDKSISHRALLFGAIAEGITTIEGLLPAEDPMST CCCCCCCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH AACLRAMGATISPIHAGQIVRVEGVGLDGLQEPQDVLDCGNSGTTIRLMLGLLAASKGRH HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCE FVLSGDSSLRRRPMNRVGQPLTMMGAKIKGRSNGDFAPLAVSGQKLRGGVIGTPVASAQV EEEECCHHHHHCCHHHHCCCHHHHCCEEECCCCCCCCEEEECCCHHCCCCCCCCCHHHHH KSALLLAALTADGATTVIEPAHSRDHSERMLRAFGADLEVGGEMGRHIRVSPGQKLYGQN HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEECCCCCCEEEECCCCHHCCCC IVVPGDISSAAFWLVAGVLVPGAELVVENVGLNPTRTGILEVLQQMEARIEVLNRHEVAG EEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC EPVGDLRVRQGPLKPFSINGDIIPRLVDEVPILAVAACFCDGESKITDASELRVKETDRL CCCCCCEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCEECCCHHH AVMTRQLTAMGADIDEHADGLTIRGGRTLRGTELDSETDHRVAMSLAVAALLAEGNSRLT HHHHHHHHHHCCCHHHCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC GSEAAAVSYPNFWDDLERLHR CCCCCEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA