| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023549
Identifier: 124023549
GI number: 124023549
Start: 1610135
End: 1610701
Strand: Direct
Name: 124023549
Synonym: P9303_18491
Alternate gene names: NA
Gene position: 1610135-1610701 (Clockwise)
Preceding gene: 124023548
Following gene: 124023550
Centisome position: 60.02
GC content: 43.92
Gene sequence:
>567_bases GTGCCTGATGCTCTTCTACAGGGCTTAAGCGGACTCAGTCAAGGCCTTGATTCCATGGCTGAGGTACTGCTTAAAATGGA GGCTGGGGTTGGATTATTGCTGGCAGTTGGCCTTTCAATGTCAGCAGCACATTTCTTTTCTCTTCTTGCTAATCGTTTAG GTCCTGTGCAAATTGCCGTGCATTTATTCTTTGATGCGCTAGGCCTAAGCCTAGCTTTTCTAATGGGGATTCTCTGTGAC AGCTTGATACTTACTTCTCTCAAGGCTGTGCCTTTACATCCGATTACTTTTGCAAACCATATGCTACCAGCAGTTTGGCC AGGATTATTTTATATTCTTGTCGGAGCTCCTTATATTAGTGATCTAATTGCTGTAACACTTTTCGCATGGATTCACCTCA ATGTAGTTGTTTTATTAAAAGCTCTTTATGGTATACCTCTCCAGCAAGGCTTGGTCATGGCCCTTCCTGGTTTCGCCTTG GCACTTGTTTTAATTGCACTCTTGTTCGCTCAGAGGTGGAAATCAAGTTACGCCCAACTAGCACGAGAAGTGGCTCTTAA TCATTGA
Upstream 100 bases:
>100_bases CTGTTTACATATAGCATGGCTTTCAATTCAGTATGGTGCTTCTACAGTGCCATTCTCTCAATTGTTGTTCTCTGGATCGT AAATCGTCCGGAGATGCGTC
Downstream 100 bases:
>100_bases TTTGGATCTGATCTGAGATCATGACTAAGACTAGATCATCGCTTCGCCATCATCGTGAACTGCTGCTTACAAGCCGCAGG ACTGTTGTTGTTTTGATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPDALLQGLSGLSQGLDSMAEVLLKMEAGVGLLLAVGLSMSAAHFFSLLANRLGPVQIAVHLFFDALGLSLAFLMGILCD SLILTSLKAVPLHPITFANHMLPAVWPGLFYILVGAPYISDLIAVTLFAWIHLNVVVLLKALYGIPLQQGLVMALPGFAL ALVLIALLFAQRWKSSYAQLAREVALNH
Sequences:
>Translated_188_residues MPDALLQGLSGLSQGLDSMAEVLLKMEAGVGLLLAVGLSMSAAHFFSLLANRLGPVQIAVHLFFDALGLSLAFLMGILCD SLILTSLKAVPLHPITFANHMLPAVWPGLFYILVGAPYISDLIAVTLFAWIHLNVVVLLKALYGIPLQQGLVMALPGFAL ALVLIALLFAQRWKSSYAQLAREVALNH >Mature_187_residues PDALLQGLSGLSQGLDSMAEVLLKMEAGVGLLLAVGLSMSAAHFFSLLANRLGPVQIAVHLFFDALGLSLAFLMGILCDS LILTSLKAVPLHPITFANHMLPAVWPGLFYILVGAPYISDLIAVTLFAWIHLNVVVLLKALYGIPLQQGLVMALPGFALA LVLIALLFAQRWKSSYAQLAREVALNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20126; Mature: 19994
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDALLQGLSGLSQGLDSMAEVLLKMEAGVGLLLAVGLSMSAAHFFSLLANRLGPVQIAV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH HLFFDALGLSLAFLMGILCDSLILTSLKAVPLHPITFANHMLPAVWPGLFYILVGAPYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH DLIAVTLFAWIHLNVVVLLKALYGIPLQQGLVMALPGFALALVLIALLFAQRWKSSYAQL HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AREVALNH HHHHHCCC >Mature Secondary Structure PDALLQGLSGLSQGLDSMAEVLLKMEAGVGLLLAVGLSMSAAHFFSLLANRLGPVQIAV CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH HLFFDALGLSLAFLMGILCDSLILTSLKAVPLHPITFANHMLPAVWPGLFYILVGAPYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH DLIAVTLFAWIHLNVVVLLKALYGIPLQQGLVMALPGFALALVLIALLFAQRWKSSYAQL HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AREVALNH HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA