| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023550
Identifier: 124023550
GI number: 124023550
Start: 1610722
End: 1611807
Strand: Direct
Name: 124023550
Synonym: P9303_18501
Alternate gene names: NA
Gene position: 1610722-1611807 (Clockwise)
Preceding gene: 124023549
Following gene: 124023552
Centisome position: 60.04
GC content: 47.15
Gene sequence:
>1086_bases ATGACTAAGACTAGATCATCGCTTCGCCATCATCGTGAACTGCTGCTTACAAGCCGCAGGACTGTTGTTGTTTTGATGCT GGCCTCAGCCATCCTTTTGTTCCTGTGCGTAGCTGTGATTCGTCGCGATGCTATTGCATTAGTAACCAGCGAATCACTTG ATGAGCTTCTTAAGCTTGCGGCACTGCTGGTGATCATCTTGGTCCCTCTGTCAGGCATTTATTCAGTGATGCTTGACTTT GTCTTCTGGGAAGGATGGCTTGATGGTCTTCCTAACCCAAGCGATCTATTTGCTGAACTATCCCCGAATATTTCTGGACA TCGGCATTACATCATTTACCTGGATGGCATTCATCAAAGTGAAGAAGACCATCCTCCACGGGTGAGTCGATTCCTCTCGC AACTAGAAGAGGGAATTGATCATGAGTCTATTTTAGTCAAAGGTATTGAGGCTTACACAATCATGCCTGTTGCACTGCGT TCAGATTCATACAGTCAGTGGTTCTGGCGAAGATTATTTTCTCTACAAGAGCATCATCCCAATTCATTAGTTCGTTTCCT AAGCGCCTTTTGTGTACAAGCCAATAATGTGATCAAAGTGGGAATTTCCTCTGACCGCCGTTATGGCCCAGTGATGAATT ATGAGCTGGCCTTGAAAATCGCCCGTCGTCTTGAATCGCTTGGCTTCCATCCCAGTAAAGCTGTGCGCCTGGTATTAGTG GGTTACAGCGGAGGAGGAGAGATGGCTATTGGGACAGCGGAGATCTTGCAACAACTTTGTCGTGTTCCAGTACAGGTGAT CACTGTCTGTGGAGTGTTCAGTGGGAATGGCGCTTTAGAGGAGATCAATCGTGTGGCTATGGTCGTTGGCGGGAAAGACC CTGTTGCGGCTCTTGGTCAGGTGGCTTACCCCGGGCGTTCGCCACTGTTGCCATTGTCAAACTGGAATCGATGGCAACGC AAAAGGAAACTTGCTCGCTATGAAATTTCCGGTATGAACCATTGTGGTCACTCAGGACCATTCAGTGATGATTTCAGTTC TAAGGTCGTTGATGCAATTTGTCGTGAACTATGTATGACCAGATAA
Upstream 100 bases:
>100_bases TTTTAATTGCACTCTTGTTCGCTCAGAGGTGGAAATCAAGTTACGCCCAACTAGCACGAGAAGTGGCTCTTAATCATTGA TTTGGATCTGATCTGAGATC
Downstream 100 bases:
>100_bases GCACCTATAAAGTCAGTCTTTGCATAGGTTTTTCGCATTAATGCAGGTTGTTAGTACGACCAGTTTTGCAGGCAATGATT GAAATTTTTAGCGGAGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTKTRSSLRHHRELLLTSRRTVVVLMLASAILLFLCVAVIRRDAIALVTSESLDELLKLAALLVIILVPLSGIYSVMLDF VFWEGWLDGLPNPSDLFAELSPNISGHRHYIIYLDGIHQSEEDHPPRVSRFLSQLEEGIDHESILVKGIEAYTIMPVALR SDSYSQWFWRRLFSLQEHHPNSLVRFLSAFCVQANNVIKVGISSDRRYGPVMNYELALKIARRLESLGFHPSKAVRLVLV GYSGGGEMAIGTAEILQQLCRVPVQVITVCGVFSGNGALEEINRVAMVVGGKDPVAALGQVAYPGRSPLLPLSNWNRWQR KRKLARYEISGMNHCGHSGPFSDDFSSKVVDAICRELCMTR
Sequences:
>Translated_361_residues MTKTRSSLRHHRELLLTSRRTVVVLMLASAILLFLCVAVIRRDAIALVTSESLDELLKLAALLVIILVPLSGIYSVMLDF VFWEGWLDGLPNPSDLFAELSPNISGHRHYIIYLDGIHQSEEDHPPRVSRFLSQLEEGIDHESILVKGIEAYTIMPVALR SDSYSQWFWRRLFSLQEHHPNSLVRFLSAFCVQANNVIKVGISSDRRYGPVMNYELALKIARRLESLGFHPSKAVRLVLV GYSGGGEMAIGTAEILQQLCRVPVQVITVCGVFSGNGALEEINRVAMVVGGKDPVAALGQVAYPGRSPLLPLSNWNRWQR KRKLARYEISGMNHCGHSGPFSDDFSSKVVDAICRELCMTR >Mature_360_residues TKTRSSLRHHRELLLTSRRTVVVLMLASAILLFLCVAVIRRDAIALVTSESLDELLKLAALLVIILVPLSGIYSVMLDFV FWEGWLDGLPNPSDLFAELSPNISGHRHYIIYLDGIHQSEEDHPPRVSRFLSQLEEGIDHESILVKGIEAYTIMPVALRS DSYSQWFWRRLFSLQEHHPNSLVRFLSAFCVQANNVIKVGISSDRRYGPVMNYELALKIARRLESLGFHPSKAVRLVLVG YSGGGEMAIGTAEILQQLCRVPVQVITVCGVFSGNGALEEINRVAMVVGGKDPVAALGQVAYPGRSPLLPLSNWNRWQRK RKLARYEISGMNHCGHSGPFSDDFSSKVVDAICRELCMTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40364; Mature: 40232
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTRSSLRHHRELLLTSRRTVVVLMLASAILLFLCVAVIRRDAIALVTSESLDELLKLA CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH ALLVIILVPLSGIYSVMLDFVFWEGWLDGLPNPSDLFAELSPNISGHRHYIIYLDGIHQS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCC EEDHPPRVSRFLSQLEEGIDHESILVKGIEAYTIMPVALRSDSYSQWFWRRLFSLQEHHP CCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHHHHHCCH NSLVRFLSAFCVQANNVIKVGISSDRRYGPVMNYELALKIARRLESLGFHPSKAVRLVLV HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE GYSGGGEMAIGTAEILQQLCRVPVQVITVCGVFSGNGALEEINRVAMVVGGKDPVAALGQ EECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCHHHHHHC VAYPGRSPLLPLSNWNRWQRKRKLARYEISGMNHCGHSGPFSDDFSSKVVDAICRELCMT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC R C >Mature Secondary Structure TKTRSSLRHHRELLLTSRRTVVVLMLASAILLFLCVAVIRRDAIALVTSESLDELLKLA CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH ALLVIILVPLSGIYSVMLDFVFWEGWLDGLPNPSDLFAELSPNISGHRHYIIYLDGIHQS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCC EEDHPPRVSRFLSQLEEGIDHESILVKGIEAYTIMPVALRSDSYSQWFWRRLFSLQEHHP CCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHHHHHCCH NSLVRFLSAFCVQANNVIKVGISSDRRYGPVMNYELALKIARRLESLGFHPSKAVRLVLV HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE GYSGGGEMAIGTAEILQQLCRVPVQVITVCGVFSGNGALEEINRVAMVVGGKDPVAALGQ EECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCHHHHHHC VAYPGRSPLLPLSNWNRWQRKRKLARYEISGMNHCGHSGPFSDDFSSKVVDAICRELCMT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA