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The map label for this gene is glgB

Identifier: 124023537

GI number: 124023537

Start: 1595656

End: 1597926

Strand: Reverse

Name: glgB

Synonym: P9303_18371

Alternate gene names: 124023537

Gene position: 1597926-1595656 (Counterclockwise)

Preceding gene: 124023538

Following gene: 124023536

Centisome position: 59.56

GC content: 50.24

Gene sequence:

>2271_bases
ATGACCACCAGTGTTGCCCTCGACTGGGTGGTTCAAGACGGCCAAAGACTTGCTGAATGTCGCCACGATCATCCTTTCTC
GCTGCTGGGTCCTCAATCCCATGAGGGGCAATGGATCGTGCGCATCTGGATGCCGGAGGCAAGCCAAGTAGAGCTGCTTT
GTGATGGCAGAACGACTGCCATGACAACGCCCAATCACTCCTGGATCTTCGAAGCAGCTCTCAACCAAGATCCCGGCCGC
ACATACCAGTTGCGGGTTAAACGCGCAGGAATCGTGCATGAGCAGCACGACCCCTGGGCCTTCCACGATGAATGGATGGG
GGAGATGGACCGCCACCTCTTTGCGGAGGGCAACCATCACCACATTTGGCAACGCATGGGCGCTCATCTGATGGAGCGTG
AGGGTGTTGAGGGAGTGATGTTCTGCCTCTGGGCACCCCGTGCATGCAGTGTGGCTGTTCTCGGAGAATTAAACGGATGG
GATGGCCGTCATCATCCGATGCAGCGTCGCCAGGGAGGCCTTTGGGAGCTGTTTATTCCTGGGTTTAAAGAAGGGACCCT
TTATAAATACGAAATCCGAACCCAGGACGGCCATTGCTATCAGAAAGCTGATCCTTATGGTTTCCAGCACGAGGTGCGCC
CAGCGACAAGCTCCGTAGTCGCCAGGCTTGATCGCTATCAATGGCAGGACGAGCAATGGATGCGGCAACGGGATAGTCGT
AATGCTCTCGATCAGCCAATTTCTGTCTATGAAATGCATTTAGGCAGCTGGATTCATGCAGCAACAGATGAACCGTATAT
CGAGTTGGATGGCACGCCCCGGGCGCCGGTACTCGCTGCTGACATGAAGCCTGGAGCTCGTCTCCTGACCTATCCCGAAC
TAGCCGACCAGTTAATCCCCTACGTGAAAGATCGGGGATTCACCCACATCGAACTGATGCCAATCTCAGAGCATCCATTT
GATGGCTCATGGGGATACCAGGTCACAGGGTGGTATGCACCCACCAGCCGATTTGGAAGTCCGGATGAATTCCGTGCATT
TGTTGATCGCTGCCACGCCGAAGGTTTAGGTGTGATCATCGATTGGGTGCCAGGCCATTTCCCTAAGGATGGTCATGGCC
TGGCCTTCTTTGATGGAACCCATCTCTACGAACATTCTGATCCACGCATTGGTGAACACAAGGAATGGGGCACGCTGATC
TTCAACTACAGCCGCAACGAGGTGCGCAACTTTCTCGTTGCCAATCTTGTGTATTGGTTTGAGCAATTCCATATTGATGG
TATTCGTGTTGATGCGGTGGCTTCGATGCTTTATCGCGACTATCTGCGACCTGATGGAGAATGGATTGCCAATGAAGATG
GAGGGCGAGAAAATACAGAAGCAGTTCGATTCCTCCAACAGGCCAATCACGTTCTATTTCAGCACTTCCCGGGAGCACTT
TCAATTGCGGAGGAGTCAACAACTTGGCCCATGGTTACTCAGCCCACTGATATGGGCGGCCTGGGATTCAACCTTAAATG
GAATATGGGTTGGATGCATGACATGCTCGATTATTTCGAGTTAGATCCTTGGTTTAGGCAGTTTCACCAGAACAACATCA
CTTTTTCGATCTGGTATACCTACACCGAAAACTTCATGCTGGCACTTAGTCATGATGAGGTTGTGCATGGTAAAAGCAAT
CTTCTCCATAAGATGCCCGGAGATGACTGGCAGAAATGTGCAAATGTTCGTGCATTGCTTGCCTATATGTGGACCCATCC
TGGCAAGAAAACTATCTTCATGGGAATGGAATTTGGTCAACGATCGGAATGGAATGTATGGGGAGATCTGCAATGGGAGC
TGTTGACACATGATCCACATAAGGGTCTGCAGAAATTGGTTGATGACCTCAACACTTTCTATAAAGCCGAGCCTGCTCTA
TGGAAAGATGACTTTGATCAATATGGATTCCAATGGATTGATTGCAATGATAATCGTCATTCTATAATCAGCTTTATGCG
TCGTGAAAGTAGTGGTGGAACTTGGCTTGTTGTCGTCGCCAACTTCACACCGCAAAGTCATTCAAATTACAGAATTGGCG
TGCCTATTGGTGGCTATTATGAGGAAGTTTTCAACACAGATAGCTCTTGTTACGGCGGTAGAAATCTCGGCAATATGGGC
GGTAAAAACACTGATGAATTCAATATCCATGGATATGAGCAGTCTCTTGAACTCTGCCTACCAGCGCTGAGCGTGCTGGT
CTTCCGTCATGACCCGAAGCGAAGTCTTTGA

Upstream 100 bases:

>100_bases
TTGATCAGCGTTCGCTGATTCAACTGCTCACTCTGGTGCTCAGTCTGCCCTTGCGGTCCATGAATCGACCTAAGCTCCCG
GCCATCGATGTCCTTGCCCC

Downstream 100 bases:

>100_bases
GAGCAGCCAAAGCCAATGAACATGTGACGAAGCTGCGTTCTCAACATCACTGATGGCCTTAACAACAACGGCCTTCAGGT
AGGTTTTCTGACTGATCCTG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 756; Mature: 755

Protein sequence:

>756_residues
MTTSVALDWVVQDGQRLAECRHDHPFSLLGPQSHEGQWIVRIWMPEASQVELLCDGRTTAMTTPNHSWIFEAALNQDPGR
TYQLRVKRAGIVHEQHDPWAFHDEWMGEMDRHLFAEGNHHHIWQRMGAHLMEREGVEGVMFCLWAPRACSVAVLGELNGW
DGRHHPMQRRQGGLWELFIPGFKEGTLYKYEIRTQDGHCYQKADPYGFQHEVRPATSSVVARLDRYQWQDEQWMRQRDSR
NALDQPISVYEMHLGSWIHAATDEPYIELDGTPRAPVLAADMKPGARLLTYPELADQLIPYVKDRGFTHIELMPISEHPF
DGSWGYQVTGWYAPTSRFGSPDEFRAFVDRCHAEGLGVIIDWVPGHFPKDGHGLAFFDGTHLYEHSDPRIGEHKEWGTLI
FNYSRNEVRNFLVANLVYWFEQFHIDGIRVDAVASMLYRDYLRPDGEWIANEDGGRENTEAVRFLQQANHVLFQHFPGAL
SIAEESTTWPMVTQPTDMGGLGFNLKWNMGWMHDMLDYFELDPWFRQFHQNNITFSIWYTYTENFMLALSHDEVVHGKSN
LLHKMPGDDWQKCANVRALLAYMWTHPGKKTIFMGMEFGQRSEWNVWGDLQWELLTHDPHKGLQKLVDDLNTFYKAEPAL
WKDDFDQYGFQWIDCNDNRHSIISFMRRESSGGTWLVVVANFTPQSHSNYRIGVPIGGYYEEVFNTDSSCYGGRNLGNMG
GKNTDEFNIHGYEQSLELCLPALSVLVFRHDPKRSL

Sequences:

>Translated_756_residues
MTTSVALDWVVQDGQRLAECRHDHPFSLLGPQSHEGQWIVRIWMPEASQVELLCDGRTTAMTTPNHSWIFEAALNQDPGR
TYQLRVKRAGIVHEQHDPWAFHDEWMGEMDRHLFAEGNHHHIWQRMGAHLMEREGVEGVMFCLWAPRACSVAVLGELNGW
DGRHHPMQRRQGGLWELFIPGFKEGTLYKYEIRTQDGHCYQKADPYGFQHEVRPATSSVVARLDRYQWQDEQWMRQRDSR
NALDQPISVYEMHLGSWIHAATDEPYIELDGTPRAPVLAADMKPGARLLTYPELADQLIPYVKDRGFTHIELMPISEHPF
DGSWGYQVTGWYAPTSRFGSPDEFRAFVDRCHAEGLGVIIDWVPGHFPKDGHGLAFFDGTHLYEHSDPRIGEHKEWGTLI
FNYSRNEVRNFLVANLVYWFEQFHIDGIRVDAVASMLYRDYLRPDGEWIANEDGGRENTEAVRFLQQANHVLFQHFPGAL
SIAEESTTWPMVTQPTDMGGLGFNLKWNMGWMHDMLDYFELDPWFRQFHQNNITFSIWYTYTENFMLALSHDEVVHGKSN
LLHKMPGDDWQKCANVRALLAYMWTHPGKKTIFMGMEFGQRSEWNVWGDLQWELLTHDPHKGLQKLVDDLNTFYKAEPAL
WKDDFDQYGFQWIDCNDNRHSIISFMRRESSGGTWLVVVANFTPQSHSNYRIGVPIGGYYEEVFNTDSSCYGGRNLGNMG
GKNTDEFNIHGYEQSLELCLPALSVLVFRHDPKRSL
>Mature_755_residues
TTSVALDWVVQDGQRLAECRHDHPFSLLGPQSHEGQWIVRIWMPEASQVELLCDGRTTAMTTPNHSWIFEAALNQDPGRT
YQLRVKRAGIVHEQHDPWAFHDEWMGEMDRHLFAEGNHHHIWQRMGAHLMEREGVEGVMFCLWAPRACSVAVLGELNGWD
GRHHPMQRRQGGLWELFIPGFKEGTLYKYEIRTQDGHCYQKADPYGFQHEVRPATSSVVARLDRYQWQDEQWMRQRDSRN
ALDQPISVYEMHLGSWIHAATDEPYIELDGTPRAPVLAADMKPGARLLTYPELADQLIPYVKDRGFTHIELMPISEHPFD
GSWGYQVTGWYAPTSRFGSPDEFRAFVDRCHAEGLGVIIDWVPGHFPKDGHGLAFFDGTHLYEHSDPRIGEHKEWGTLIF
NYSRNEVRNFLVANLVYWFEQFHIDGIRVDAVASMLYRDYLRPDGEWIANEDGGRENTEAVRFLQQANHVLFQHFPGALS
IAEESTTWPMVTQPTDMGGLGFNLKWNMGWMHDMLDYFELDPWFRQFHQNNITFSIWYTYTENFMLALSHDEVVHGKSNL
LHKMPGDDWQKCANVRALLAYMWTHPGKKTIFMGMEFGQRSEWNVWGDLQWELLTHDPHKGLQKLVDDLNTFYKAEPALW
KDDFDQYGFQWIDCNDNRHSIISFMRRESSGGTWLVVVANFTPQSHSNYRIGVPIGGYYEEVFNTDSSCYGGRNLGNMGG
KNTDEFNIHGYEQSLELCLPALSVLVFRHDPKRSL

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=668, Percent_Identity=26.497005988024, Blast_Score=193, Evalue=5e-49,
Organism=Escherichia coli, GI1789839, Length=731, Percent_Identity=49.1108071135431, Blast_Score=675, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=673, Percent_Identity=24.517087667162, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI32564391, Length=643, Percent_Identity=24.2612752721617, Blast_Score=143, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6320826, Length=518, Percent_Identity=27.7992277992278, Blast_Score=161, Evalue=4e-40,
Organism=Drosophila melanogaster, GI28573410, Length=665, Percent_Identity=27.9699248120301, Blast_Score=207, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_PROM3 (A2CAR9)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001017844.1
- ProteinModelPortal:   A2CAR9
- STRING:   A2CAR9
- GeneID:   4776112
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_18371
- eggNOG:   COG0296
- HOGENOM:   HBG287139
- OMA:   PPLATIM
- ProtClustDB:   PRK05402
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 87734; Mature: 87603

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: ACT_SITE 326-326 ACT_SITE 361-361 ACT_SITE 366-366 ACT_SITE 429-429 ACT_SITE 431-431 ACT_SITE 484-484 ACT_SITE 551-551 ACT_SITE 552-552

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSVALDWVVQDGQRLAECRHDHPFSLLGPQSHEGQWIVRIWMPEASQVELLCDGRTTA
CCCCEEEHEEHHCCHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCEEEEECCCEEE
MTTPNHSWIFEAALNQDPGRTYQLRVKRAGIVHEQHDPWAFHDEWMGEMDRHLFAEGNHH
EECCCCCEEEEEECCCCCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHCCCCCH
HIWQRMGAHLMEREGVEGVMFCLWAPRACSVAVLGELNGWDGRHHPMQRRQGGLWELFIP
HHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECC
GFKEGTLYKYEIRTQDGHCYQKADPYGFQHEVRPATSSVVARLDRYQWQDEQWMRQRDSR
CCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC
NALDQPISVYEMHLGSWIHAATDEPYIELDGTPRAPVLAADMKPGARLLTYPELADQLIP
HHHCCCHHHHHHHHCCEEEECCCCCEEEECCCCCCCEEEECCCCCCEEEECHHHHHHHHH
YVKDRGFTHIELMPISEHPFDGSWGYQVTGWYAPTSRFGSPDEFRAFVDRCHAEGLGVII
HHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEE
DWVPGHFPKDGHGLAFFDGTHLYEHSDPRIGEHKEWGTLIFNYSRNEVRNFLVANLVYWF
ECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
EQFHIDGIRVDAVASMLYRDYLRPDGEWIANEDGGRENTEAVRFLQQANHVLFQHFPGAL
HHHCCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
SIAEESTTWPMVTQPTDMGGLGFNLKWNMGWMHDMLDYFELDPWFRQFHQNNITFSIWYT
EECCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEE
YTENFMLALSHDEVVHGKSNLLHKMPGDDWQKCANVRALLAYMWTHPGKKTIFMGMEFGQ
EECCEEEEEECCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
RSEWNVWGDLQWELLTHDPHKGLQKLVDDLNTFYKAEPALWKDDFDQYGFQWIDCNDNRH
CCCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEECCCCHH
SIISFMRRESSGGTWLVVVANFTPQSHSNYRIGVPIGGYYEEVFNTDSSCYGGRNLGNMG
HHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCC
GKNTDEFNIHGYEQSLELCLPALSVLVFRHDPKRSL
CCCCCCEEECCHHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure 
TTSVALDWVVQDGQRLAECRHDHPFSLLGPQSHEGQWIVRIWMPEASQVELLCDGRTTA
CCCEEEHEEHHCCHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCEEEEECCCEEE
MTTPNHSWIFEAALNQDPGRTYQLRVKRAGIVHEQHDPWAFHDEWMGEMDRHLFAEGNHH
EECCCCCEEEEEECCCCCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHCCCCCH
HIWQRMGAHLMEREGVEGVMFCLWAPRACSVAVLGELNGWDGRHHPMQRRQGGLWELFIP
HHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECC
GFKEGTLYKYEIRTQDGHCYQKADPYGFQHEVRPATSSVVARLDRYQWQDEQWMRQRDSR
CCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC
NALDQPISVYEMHLGSWIHAATDEPYIELDGTPRAPVLAADMKPGARLLTYPELADQLIP
HHHCCCHHHHHHHHCCEEEECCCCCEEEECCCCCCCEEEECCCCCCEEEECHHHHHHHHH
YVKDRGFTHIELMPISEHPFDGSWGYQVTGWYAPTSRFGSPDEFRAFVDRCHAEGLGVII
HHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEE
DWVPGHFPKDGHGLAFFDGTHLYEHSDPRIGEHKEWGTLIFNYSRNEVRNFLVANLVYWF
ECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
EQFHIDGIRVDAVASMLYRDYLRPDGEWIANEDGGRENTEAVRFLQQANHVLFQHFPGAL
HHHCCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
SIAEESTTWPMVTQPTDMGGLGFNLKWNMGWMHDMLDYFELDPWFRQFHQNNITFSIWYT
EECCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEE
YTENFMLALSHDEVVHGKSNLLHKMPGDDWQKCANVRALLAYMWTHPGKKTIFMGMEFGQ
EECCEEEEEECCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
RSEWNVWGDLQWELLTHDPHKGLQKLVDDLNTFYKAEPALWKDDFDQYGFQWIDCNDNRH
CCCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEECCCCHH
SIISFMRRESSGGTWLVVVANFTPQSHSNYRIGVPIGGYYEEVFNTDSSCYGGRNLGNMG
HHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCC
GKNTDEFNIHGYEQSLELCLPALSVLVFRHDPKRSL
CCCCCCEEECCHHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA