| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023495
Identifier: 124023495
GI number: 124023495
Start: 1565433
End: 1566122
Strand: Direct
Name: 124023495
Synonym: P9303_17951
Alternate gene names: NA
Gene position: 1565433-1566122 (Clockwise)
Preceding gene: 124023494
Following gene: 124023496
Centisome position: 58.35
GC content: 37.68
Gene sequence:
>690_bases TTGTCCCTGATAGCAAGAACAGTCAACGATTACATTAGCAATCACATGTCTGAGACCCTCCTAAATGAACTAACCCATAC AGTCCAACAATGTCTTGCTTGTATATCCCTTCAGAATAAAGGTGAACCAAATATTGAAAAAGTTGATCTTGATTTCTGGC TTGATCCAAAGTCAGTCATTTTCATGACCTCCCCTGAAACGGAGGACATCTATTGTGCAAAACTTGATGATTTGGATAGT AAGAGTGAATTTCTTGAGATAATCCTAGATCAGGCTATTGTCTCTACTTTCCTAACAACTGAAGATTTAATTCTAGTACT TGCTGCTCAGGACTCACCAAATTTATATGATGTCAGGATGGCCGCTATTGATAGATCTACTGGATGTGCCCTAATTCGCA CTGAGAATCTTTTTAATAAAGACATGCTGGAGCGTAATATTCTTAAGACTATTGAGGACTCCACAGAACCATCAAATCAA TTCTGGCTGCATCGCTACTCCGATAATAAATCATGGCGATTTAGAAAAGTTGCCTACAAACGAATCTCGTATCCTGGCAA TAATTTTCACAAACGATTTATTAGTAATTCATACCGCAGACTTCAGTCTTTTATGTTGGATATCGAGACACATATCCTTT CTAAGTTTAATGAAGTCGAAATACAGGAGGATGACAATCCTGAACCATAA
Upstream 100 bases:
>100_bases GCGGCACTTATGCAATAAGCTGCTTAAGAGACTGTATCCCTGCAAACAAAAACACCGGAAACACAATCTTTCAATCAAAG CCATACTACAGTATAAATAC
Downstream 100 bases:
>100_bases TTCAACAACCGGTTAGCTACTTTAGTTTCATTCAGCAAGCGGCACATCATTTTGTATGATCCTGATTGCTTGCTTTGTTT TTTCCGGCTCTCCAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSLIARTVNDYISNHMSETLLNELTHTVQQCLACISLQNKGEPNIEKVDLDFWLDPKSVIFMTSPETEDIYCAKLDDLDS KSEFLEIILDQAIVSTFLTTEDLILVLAAQDSPNLYDVRMAAIDRSTGCALIRTENLFNKDMLERNILKTIEDSTEPSNQ FWLHRYSDNKSWRFRKVAYKRISYPGNNFHKRFISNSYRRLQSFMLDIETHILSKFNEVEIQEDDNPEP
Sequences:
>Translated_229_residues MSLIARTVNDYISNHMSETLLNELTHTVQQCLACISLQNKGEPNIEKVDLDFWLDPKSVIFMTSPETEDIYCAKLDDLDS KSEFLEIILDQAIVSTFLTTEDLILVLAAQDSPNLYDVRMAAIDRSTGCALIRTENLFNKDMLERNILKTIEDSTEPSNQ FWLHRYSDNKSWRFRKVAYKRISYPGNNFHKRFISNSYRRLQSFMLDIETHILSKFNEVEIQEDDNPEP >Mature_228_residues SLIARTVNDYISNHMSETLLNELTHTVQQCLACISLQNKGEPNIEKVDLDFWLDPKSVIFMTSPETEDIYCAKLDDLDSK SEFLEIILDQAIVSTFLTTEDLILVLAAQDSPNLYDVRMAAIDRSTGCALIRTENLFNKDMLERNILKTIEDSTEPSNQF WLHRYSDNKSWRFRKVAYKRISYPGNNFHKRFISNSYRRLQSFMLDIETHILSKFNEVEIQEDDNPEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26684; Mature: 26553
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIARTVNDYISNHMSETLLNELTHTVQQCLACISLQNKGEPNIEKVDLDFWLDPKSVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEE FMTSPETEDIYCAKLDDLDSKSEFLEIILDQAIVSTFLTTEDLILVLAAQDSPNLYDVRM EEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEH AAIDRSTGCALIRTENLFNKDMLERNILKTIEDSTEPSNQFWLHRYSDNKSWRFRKVAYK EEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH RISYPGNNFHKRFISNSYRRLQSFMLDIETHILSKFNEVEIQEDDNPEP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC >Mature Secondary Structure SLIARTVNDYISNHMSETLLNELTHTVQQCLACISLQNKGEPNIEKVDLDFWLDPKSVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEE FMTSPETEDIYCAKLDDLDSKSEFLEIILDQAIVSTFLTTEDLILVLAAQDSPNLYDVRM EEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEH AAIDRSTGCALIRTENLFNKDMLERNILKTIEDSTEPSNQFWLHRYSDNKSWRFRKVAYK EEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH RISYPGNNFHKRFISNSYRRLQSFMLDIETHILSKFNEVEIQEDDNPEP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA