| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023466
Identifier: 124023466
GI number: 124023466
Start: 1542565
End: 1543347
Strand: Direct
Name: 124023466
Synonym: P9303_17661
Alternate gene names: NA
Gene position: 1542565-1543347 (Clockwise)
Preceding gene: 124023463
Following gene: 124023467
Centisome position: 57.5
GC content: 47.51
Gene sequence:
>783_bases TTGTCATCTATTGAGGTCGCTGTTGACTCAAAAGTCTCTAGTAGATGCTCGGATCTATCTGACAGCAATGGATCTTGGGA ACCTGCCACACAGATCACCCTTGATGCTGCCAGCAGTAGTGATGGCGATGAAGAGTTCCCTTTCCTCCTTGAACCATTAC ACAATGCGTCTTGTCCGATAACAGTCAGTAGTCAACTGGAATCGCTGGAATCACTTCAACTCACAGTAGGGCAGAGCATT CTGCTGTCCTCCCAGACGGATCAATCTCGCTACGTGCGCCTGTTTTTTCAGCAGGGGATTGCCAGGCTTTCAGGCTCTTT CGGAGATCATTTTCCTGATATCACTTTGGCTTTTTGTGGTGATTCTGAATCTAGTTGGCTTCGATTACCCGACGGCAGTA ACTTTTTACTTGAGGCACTCACGAATAGTTCAATTGGCCTTCATTACGCAGACAACTGCCCGAAAGAGCAAGATCTCCTA TGGGATTGGCTATTTGATTTTCATCTTGTCAGGCATCCAGTAGGAGCTGAAGCAAGGTTAGTTGCTCTTTTAAAGCTTCT GATTGGTCGCTTTGGCATCCGTAGAAGTGAAGGTTATGAATTGCCCTTTCCCCTTGGCCATGCACGCATGGCCGAACTGA TTGGGGCCACGCGCTCCACTGTTACTCGTCAAATCACCTTATTTCGGAACAAGAATGATCTTCAGCTGATTGAACCTAAC GGAACTTTTCTGCTCTCGGCACGACTGATCGAATCCGCCCCGGCTATGGATATACGATTGTGA
Upstream 100 bases:
>100_bases ACCCGAATCAATAGCTACCTCTAGATGTGATAAATGTCACACATAAAGCAAGCATCGATCCGTTCCTGATGAGTGAAAAT GATGCATCTGCTTGTGATAA
Downstream 100 bases:
>100_bases TGGCTAACCACTTGCAAATCAAGGGCCTCTGGCATCACTACGGTGATGGATCAGCAGAAGGCTGGACACTGCAATCCATC AATATGAACCTCCAGAGAGG
Product: regulatory proteins, Crp family protein
Products: NA
Alternate protein names: Regulatory Proteins Crp Family Protein; Crp Family Regulatory Protein
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSSIEVAVDSKVSSRCSDLSDSNGSWEPATQITLDAASSSDGDEEFPFLLEPLHNASCPITVSSQLESLESLQLTVGQSI LLSSQTDQSRYVRLFFQQGIARLSGSFGDHFPDITLAFCGDSESSWLRLPDGSNFLLEALTNSSIGLHYADNCPKEQDLL WDWLFDFHLVRHPVGAEARLVALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPN GTFLLSARLIESAPAMDIRL
Sequences:
>Translated_260_residues MSSIEVAVDSKVSSRCSDLSDSNGSWEPATQITLDAASSSDGDEEFPFLLEPLHNASCPITVSSQLESLESLQLTVGQSI LLSSQTDQSRYVRLFFQQGIARLSGSFGDHFPDITLAFCGDSESSWLRLPDGSNFLLEALTNSSIGLHYADNCPKEQDLL WDWLFDFHLVRHPVGAEARLVALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPN GTFLLSARLIESAPAMDIRL >Mature_259_residues SSIEVAVDSKVSSRCSDLSDSNGSWEPATQITLDAASSSDGDEEFPFLLEPLHNASCPITVSSQLESLESLQLTVGQSIL LSSQTDQSRYVRLFFQQGIARLSGSFGDHFPDITLAFCGDSESSWLRLPDGSNFLLEALTNSSIGLHYADNCPKEQDLLW DWLFDFHLVRHPVGAEARLVALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPNG TFLLSARLIESAPAMDIRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28732; Mature: 28601
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIEVAVDSKVSSRCSDLSDSNGSWEPATQITLDAASSSDGDEEFPFLLEPLHNASCPI CCCEEEEECCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCE TVSSQLESLESLQLTVGQSILLSSQTDQSRYVRLFFQQGIARLSGSFGDHFPDITLAFCG EEHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DSESSWLRLPDGSNFLLEALTNSSIGLHYADNCPKEQDLLWDWLFDFHLVRHPVGAEARL CCCCCEEECCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH VALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPN HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCC GTFLLSARLIESAPAMDIRL CCEEEEEEHHCCCCCCEECC >Mature Secondary Structure SSIEVAVDSKVSSRCSDLSDSNGSWEPATQITLDAASSSDGDEEFPFLLEPLHNASCPI CCEEEEECCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCE TVSSQLESLESLQLTVGQSILLSSQTDQSRYVRLFFQQGIARLSGSFGDHFPDITLAFCG EEHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DSESSWLRLPDGSNFLLEALTNSSIGLHYADNCPKEQDLLWDWLFDFHLVRHPVGAEARL CCCCCEEECCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH VALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPN HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCC GTFLLSARLIESAPAMDIRL CCEEEEEEHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA