| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023444
Identifier: 124023444
GI number: 124023444
Start: 1524788
End: 1526464
Strand: Reverse
Name: 124023444
Synonym: P9303_17441
Alternate gene names: NA
Gene position: 1526464-1524788 (Counterclockwise)
Preceding gene: 124023445
Following gene: 124023443
Centisome position: 56.9
GC content: 53.73
Gene sequence:
>1677_bases GTGGTGAATTTGGCGGACAGCACATCCACTCAGATCCTGTTGCTGGCTCCCGATCTGCTCGGTGAATCCTTGGCGTTGCA GCTCAGCAGTGCAAACCCAAACCTGGATGTCATTCTGCGGACGGACCAGCTGAGCCGTCATCCAGTCCTAGTGATCTTGT CGGTGGAGAGTCTCGAAACTCTCAGCACATTGCAACTGGAACTGAAAAGACTTCAGGAGCATTGGCAACCTGCGCCAGTA ATGCTGATCCTTCCGGCCCAGCTTCGTTTCAATGCCAACGAGTTGTTGAGCCTCGATTGTCCAGGCCTACTTCAAGACCC TGATCTGGCCACATTGCAGGATGCCATCACCACCCTTTGTGCCGGGGGCAGAGTTGTGAGACTCAATGCTGCCCCCGTCT CCCAAGACAGCATTCCCCAAGCAACGATGGGACTTGGTCAGTGGCTGTTGGTGAGTGGTCTCCAGCAGATCGACAACGAT CTCAGGTTGATCGAAGCATTCCTCAACCCACCGCCCCAAAATGAACTGTTTCGTCTTTTGATGGAAGGGCGCCAGCGGGA ACTCCGCAGTGCAAGAGATTTTTTGTTATGGATTTGGGGCCCGCTGCAAGTGGGACTACGCAACCCTTTCCCCCCAAACC GGCCAGCCCAAAAGGCACGCATCAATTTCGATTTCGATGCTTCAAGACAGATCTCAGCAGAAGCTGCTGGAACGGTGATC TGCCTCACTGAACGGAACGCAGTGGCGGTATGGGGAGCGATCCGTCAGCGGCTTAGCGATTCCGTAGAAAGAGGACTCAG AAATTCAACAGGCAGCCTGCTAGCGATTGAAAGCCTCAATCCTGAGCGACGTCGTGATCTACTCCTTGCCCTTTTGAACC AATTGGATCAAGTGATGAAAAGGCTGCGTCAAGCCAACAGTACCGAGACCCCACTCAATGACTCCTGGCTGACGCTCGAA TCTGAACTACGTGAACAAGCCCTGCGATCCATGGCAGGGAATTACGTCAGACTTCCTCGAGGTGGTGAACTCAAGCCAGT GGCAGATCAATTGCTTGCCACTGCCGATCTCAAGGGAATTGATCAAGAACTTCCAGATCCCCAGAGAATGCTGGCTCCAT TGCTGCTCGACAGACCCGTGCTTGTTGAGGGGCAGCTGCTGCCGGCAGATGCCCCTCGGGCCTTACTGCAACTCGAAATG TTGGTGGGTAACTGGCTCGTACGAACCGCTGAAATAATCAGTGCCGAAGTTCTCGGAACCTGTGGTGAGTGGCCCGAACT ACGCCGATTCCTACTTAACCAGCACTTGATCTCCACACGAGAACTCGAGCGATTGCGTAATCAACTCAATAGTCAGGCCC GTTGGCAAAACTGGATTCAAAGACCAATCCAGCTCTACGAAAGTAAACGACTCCTCTACAGGTTGCGAGACGGCATTATC GAGCCATTACTGCTCACCGAACCTCGTGATGAAGAACTCAGCCAGCTTGGTTGGTGGCAGCAGCAAGTTGCTCTATTGCT CGAAGCCCGCGATGCTCTGGCACCCTCAATGCAATCCCTGATCAAACGCATTGGTGATCTCATGGTGGTCGTGCTTACTC AGGTATTAGGCCGTGCTATTGGTCTGGTTGGACGAGGAATCGCGCAGGGAATGGGACGCAGCCTGAGAGGTGGCTAA
Upstream 100 bases:
>100_bases GTCGGCCAGCATGTAATAACCAGAACTAAAAACATCAAGATCTCAACGGACTGGAGGATTTGCCTAACGCTCGTTAACTT GATGGCATAAGCCTTGTGCC
Downstream 100 bases:
>100_bases CTCCCACACTTTCGAGGCAATCAAGCGCCAAAATGAGCATTAAACATCTCCCTGTACTGCCCATGACCCATCTGCTCAAA GCACTACTGAGCTTGGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV MLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLCAGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDND LRLIEAFLNPPPQNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMKRLRQANSTETPLNDSWLTLE SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEM LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG
Sequences:
>Translated_558_residues MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV MLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLCAGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDND LRLIEAFLNPPPQNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMKRLRQANSTETPLNDSWLTLE SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEM LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG >Mature_558_residues MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV MLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLCAGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDND LRLIEAFLNPPPQNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMKRLRQANSTETPLNDSWLTLE SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEM LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR016837 - InterPro: IPR022552 [H]
Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 62459; Mature: 62459
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLET CCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHHHH LSTLQLELKRLQEHWQPAPVMLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLC HHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH AGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDNDLRLIEAFLNPPPQNELFRLL CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI HHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMK EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH RLRQANSTETPLNDSWLTLESELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGI HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCC DQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEMLVGNWLVRTAEIISAEVLGT HHHCCCHHHHHHHHHHCCCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGRGIAQGMGRSLRGG HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLET CCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHHHH LSTLQLELKRLQEHWQPAPVMLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLC HHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH AGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDNDLRLIEAFLNPPPQNELFRLL CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI HHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMK EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH RLRQANSTETPLNDSWLTLESELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGI HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCC DQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEMLVGNWLVRTAEIISAEVLGT HHHCCCHHHHHHHHHHCCCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGRGIAQGMGRSLRGG HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]