| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023443
Identifier: 124023443
GI number: 124023443
Start: 1524186
End: 1524755
Strand: Reverse
Name: 124023443
Synonym: P9303_17431
Alternate gene names: NA
Gene position: 1524755-1524186 (Counterclockwise)
Preceding gene: 124023444
Following gene: 124023442
Centisome position: 56.84
GC content: 47.37
Gene sequence:
>570_bases ATGAGCATTAAACATCTCCCTGTACTGCCCATGACCCATCTGCTCAAAGCACTACTGAGCTTGGGTCTGGCCATTCTTCT GATGGTGCCCCCAGTCCAAGCCATCCGAGATGACGATGCCTACGACGGCAACATCTTTCCGATCTATGCGGGCGATGGTT CATTGGGTTACGGGCAAGCAACAAATCTTCCCGAAGCCCTTAGAGAGAAGCGCACAAGTGTGATCGTGTTTTATCTCGAT GACAGCGCCGTCAGCAAGGCTTTCTCGCCTGTGGTGTCAACAATTAAATTGATATGGAGAGATTCCATTGATCTGATCCC ATTGACCACAGACGAGTTTCAAGGACGAACAAGCAACGATCCCCAAGAAGAGTCTTATTACTGGCATGGACGCATCCCTC AAGTGGTGGTGATCGATGGTCAAGGTGAGGTGCTACTCGATCAAGAAGGCCAAGTTTCACTCGATGAAATCAATGATGCA ATCAGTACTGCTACAGGCCTAAGTAAACCAATTGATTCACTTAAAATCGACAGCTTCAATGAGTACAACAGCTTCATGGT GAAAGAATAA
Upstream 100 bases:
>100_bases GCCGTGCTATTGGTCTGGTTGGACGAGGAATCGCGCAGGGAATGGGACGCAGCCTGAGAGGTGGCTAACTCCCACACTTT CGAGGCAATCAAGCGCCAAA
Downstream 100 bases:
>100_bases GGCGCTAAAGCACTGCTATCAGCATCAACCACCCTTTACGCTGCGCGCCAGGTCCCCCGGTCTAGTAAGCCGGCTGCTCC AATGACTTGCCTGCTTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSIKHLPVLPMTHLLKALLSLGLAILLMVPPVQAIRDDDAYDGNIFPIYAGDGSLGYGQATNLPEALREKRTSVIVFYLD DSAVSKAFSPVVSTIKLIWRDSIDLIPLTTDEFQGRTSNDPQEESYYWHGRIPQVVVIDGQGEVLLDQEGQVSLDEINDA ISTATGLSKPIDSLKIDSFNEYNSFMVKE
Sequences:
>Translated_189_residues MSIKHLPVLPMTHLLKALLSLGLAILLMVPPVQAIRDDDAYDGNIFPIYAGDGSLGYGQATNLPEALREKRTSVIVFYLD DSAVSKAFSPVVSTIKLIWRDSIDLIPLTTDEFQGRTSNDPQEESYYWHGRIPQVVVIDGQGEVLLDQEGQVSLDEINDA ISTATGLSKPIDSLKIDSFNEYNSFMVKE >Mature_188_residues SIKHLPVLPMTHLLKALLSLGLAILLMVPPVQAIRDDDAYDGNIFPIYAGDGSLGYGQATNLPEALREKRTSVIVFYLDD SAVSKAFSPVVSTIKLIWRDSIDLIPLTTDEFQGRTSNDPQEESYYWHGRIPQVVVIDGQGEVLLDQEGQVSLDEINDAI STATGLSKPIDSLKIDSFNEYNSFMVKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20885; Mature: 20754
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKHLPVLPMTHLLKALLSLGLAILLMVPPVQAIRDDDAYDGNIFPIYAGDGSLGYGQA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCC TNLPEALREKRTSVIVFYLDDSAVSKAFSPVVSTIKLIWRDSIDLIPLTTDEFQGRTSND CCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHCCCCCCCC PQEESYYWHGRIPQVVVIDGQGEVLLDQEGQVSLDEINDAISTATGLSKPIDSLKIDSFN CCCCCEEECCCCCEEEEECCCCCEEECCCCCEEHHHHHHHHHHHHCCCCCCCCEECCCCC EYNSFMVKE CCCCEEECC >Mature Secondary Structure SIKHLPVLPMTHLLKALLSLGLAILLMVPPVQAIRDDDAYDGNIFPIYAGDGSLGYGQA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCC TNLPEALREKRTSVIVFYLDDSAVSKAFSPVVSTIKLIWRDSIDLIPLTTDEFQGRTSND CCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHCCCCCCCC PQEESYYWHGRIPQVVVIDGQGEVLLDQEGQVSLDEINDAISTATGLSKPIDSLKIDSFN CCCCCEEECCCCCEEEEECCCCCEEECCCCCEEHHHHHHHHHHHHCCCCCCCCEECCCCC EYNSFMVKE CCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]