Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023444

Identifier: 124023444

GI number: 124023444

Start: 1524788

End: 1526464

Strand: Reverse

Name: 124023444

Synonym: P9303_17441

Alternate gene names: NA

Gene position: 1526464-1524788 (Counterclockwise)

Preceding gene: 124023445

Following gene: 124023443

Centisome position: 56.9

GC content: 53.73

Gene sequence:

>1677_bases
GTGGTGAATTTGGCGGACAGCACATCCACTCAGATCCTGTTGCTGGCTCCCGATCTGCTCGGTGAATCCTTGGCGTTGCA
GCTCAGCAGTGCAAACCCAAACCTGGATGTCATTCTGCGGACGGACCAGCTGAGCCGTCATCCAGTCCTAGTGATCTTGT
CGGTGGAGAGTCTCGAAACTCTCAGCACATTGCAACTGGAACTGAAAAGACTTCAGGAGCATTGGCAACCTGCGCCAGTA
ATGCTGATCCTTCCGGCCCAGCTTCGTTTCAATGCCAACGAGTTGTTGAGCCTCGATTGTCCAGGCCTACTTCAAGACCC
TGATCTGGCCACATTGCAGGATGCCATCACCACCCTTTGTGCCGGGGGCAGAGTTGTGAGACTCAATGCTGCCCCCGTCT
CCCAAGACAGCATTCCCCAAGCAACGATGGGACTTGGTCAGTGGCTGTTGGTGAGTGGTCTCCAGCAGATCGACAACGAT
CTCAGGTTGATCGAAGCATTCCTCAACCCACCGCCCCAAAATGAACTGTTTCGTCTTTTGATGGAAGGGCGCCAGCGGGA
ACTCCGCAGTGCAAGAGATTTTTTGTTATGGATTTGGGGCCCGCTGCAAGTGGGACTACGCAACCCTTTCCCCCCAAACC
GGCCAGCCCAAAAGGCACGCATCAATTTCGATTTCGATGCTTCAAGACAGATCTCAGCAGAAGCTGCTGGAACGGTGATC
TGCCTCACTGAACGGAACGCAGTGGCGGTATGGGGAGCGATCCGTCAGCGGCTTAGCGATTCCGTAGAAAGAGGACTCAG
AAATTCAACAGGCAGCCTGCTAGCGATTGAAAGCCTCAATCCTGAGCGACGTCGTGATCTACTCCTTGCCCTTTTGAACC
AATTGGATCAAGTGATGAAAAGGCTGCGTCAAGCCAACAGTACCGAGACCCCACTCAATGACTCCTGGCTGACGCTCGAA
TCTGAACTACGTGAACAAGCCCTGCGATCCATGGCAGGGAATTACGTCAGACTTCCTCGAGGTGGTGAACTCAAGCCAGT
GGCAGATCAATTGCTTGCCACTGCCGATCTCAAGGGAATTGATCAAGAACTTCCAGATCCCCAGAGAATGCTGGCTCCAT
TGCTGCTCGACAGACCCGTGCTTGTTGAGGGGCAGCTGCTGCCGGCAGATGCCCCTCGGGCCTTACTGCAACTCGAAATG
TTGGTGGGTAACTGGCTCGTACGAACCGCTGAAATAATCAGTGCCGAAGTTCTCGGAACCTGTGGTGAGTGGCCCGAACT
ACGCCGATTCCTACTTAACCAGCACTTGATCTCCACACGAGAACTCGAGCGATTGCGTAATCAACTCAATAGTCAGGCCC
GTTGGCAAAACTGGATTCAAAGACCAATCCAGCTCTACGAAAGTAAACGACTCCTCTACAGGTTGCGAGACGGCATTATC
GAGCCATTACTGCTCACCGAACCTCGTGATGAAGAACTCAGCCAGCTTGGTTGGTGGCAGCAGCAAGTTGCTCTATTGCT
CGAAGCCCGCGATGCTCTGGCACCCTCAATGCAATCCCTGATCAAACGCATTGGTGATCTCATGGTGGTCGTGCTTACTC
AGGTATTAGGCCGTGCTATTGGTCTGGTTGGACGAGGAATCGCGCAGGGAATGGGACGCAGCCTGAGAGGTGGCTAA

Upstream 100 bases:

>100_bases
GTCGGCCAGCATGTAATAACCAGAACTAAAAACATCAAGATCTCAACGGACTGGAGGATTTGCCTAACGCTCGTTAACTT
GATGGCATAAGCCTTGTGCC

Downstream 100 bases:

>100_bases
CTCCCACACTTTCGAGGCAATCAAGCGCCAAAATGAGCATTAAACATCTCCCTGTACTGCCCATGACCCATCTGCTCAAA
GCACTACTGAGCTTGGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV
MLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLCAGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDND
LRLIEAFLNPPPQNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI
CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMKRLRQANSTETPLNDSWLTLE
SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEM
LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII
EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG

Sequences:

>Translated_558_residues
MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV
MLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLCAGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDND
LRLIEAFLNPPPQNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI
CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMKRLRQANSTETPLNDSWLTLE
SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEM
LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII
EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG
>Mature_558_residues
MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV
MLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLCAGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDND
LRLIEAFLNPPPQNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI
CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMKRLRQANSTETPLNDSWLTLE
SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEM
LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII
EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR016837
- InterPro:   IPR022552 [H]

Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 62459; Mature: 62459

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLET
CCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHHHH
LSTLQLELKRLQEHWQPAPVMLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLC
HHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
AGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDNDLRLIEAFLNPPPQNELFRLL
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI
HHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE
CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMK
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
RLRQANSTETPLNDSWLTLESELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGI
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCC
DQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEMLVGNWLVRTAEIISAEVLGT
HHHCCCHHHHHHHHHHCCCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
CGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVGRGIAQGMGRSLRGG
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLET
CCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHHHH
LSTLQLELKRLQEHWQPAPVMLILPAQLRFNANELLSLDCPGLLQDPDLATLQDAITTLC
HHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
AGGRVVRLNAAPVSQDSIPQATMGLGQWLLVSGLQQIDNDLRLIEAFLNPPPQNELFRLL
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MEGRQRELRSARDFLLWIWGPLQVGLRNPFPPNRPAQKARINFDFDASRQISAEAAGTVI
HHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE
CLTERNAVAVWGAIRQRLSDSVERGLRNSTGSLLAIESLNPERRRDLLLALLNQLDQVMK
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
RLRQANSTETPLNDSWLTLESELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGI
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCC
DQELPDPQRMLAPLLLDRPVLVEGQLLPADAPRALLQLEMLVGNWLVRTAEIISAEVLGT
HHHCCCHHHHHHHHHHCCCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
CGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVGRGIAQGMGRSLRGG
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]