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The map label for this gene is ldcA [C]

Identifier: 124023428

GI number: 124023428

Start: 1510052

End: 1510951

Strand: Direct

Name: ldcA [C]

Synonym: P9303_17261

Alternate gene names: 124023428

Gene position: 1510052-1510951 (Clockwise)

Preceding gene: 124023427

Following gene: 124023441

Centisome position: 56.29

GC content: 54.11

Gene sequence:

>900_bases
TTGACCCCAGCCTTTAATGCATCGACACCGTTGGCGGCGCCAACACCACTGCGTGATGGTTCACGAATTCGGGCGGTCAA
TACTGGTACGTGGATCGATCCTCAAGCAGACTTTTCTCTTTTAGTTGAGCGTTGCAAGGCGCAGGGGTGGCTCCTTGAAT
TACCTCCATCGTTGCATCGCCAATGGCAGTGGTTTTCTGGCACAGATGCCCAGCGCCGCACTGAACTAGAGGACGCGTGG
AGGGATCCTCATGTTGATGGAATTGTCTACATCGGCTCTGGTTGGGGTGGCGCAAGGGTTTTGGAGGACGGGTTCCATTT
TCCACGACGCTCCCTTTGGAGCCTCGGCTTCTCAGACTCCAGTGCTCTGTTATTGGCCCAGTGGGCTGTGGGATCTCGCG
GCGCCATCCATGGGTCGATAACTGGGTCTGACGAACAATGGCAACGAACGGTTGATCTGTTGTCTTGTCAATCTGTAGCT
CCGATATCAGGCATTGGGGTCATTCCAGGCATTGCTGTAGGCCCTTTAGTGGTAACCAATCTCACCGTGGCTACACATTT
AATCGGAACACCCTGGTTCCCTGATTTGCGGGGTGCCGTGTTAGTGCTCGAGGATGTAGGTGAAGCACCCTATAGGGTTG
ATCGCATGCTCACACAATGGCGCAGTGCAGGGCTGCTACGAGATGTTGCGGCTGTAGCTACAGGCCGTTTCAGCTGGAAA
GGGGAGATTGTCCCTGGAGACTTCTCAATGGTCGGAATCCTTGAGGAGCGTCTTTCTTCTCTTGGCGTGCCATTGGTCAG
TGATCTTCCTGTTGGTCATGGCCAACCGAATCTTGCCTTGCCTCTTGGAGCAATAGCGCGCCTCGACGGACGCAATGGAT
CTCTAATGTTGTTGTCCTAA

Upstream 100 bases:

>100_bases
GTCACTGCTCGGCTGATTCACGATGCGACGGCGTTCGCTGCTGATGGGGGTTCCGGCTGCCTTAGCAGCAACCTTGACTT
GGCCAAAGCTGGGGCAAACG

Downstream 100 bases:

>100_bases
GCCATATTCATTAAAAAGGGAGGCCTCACAGCCCCCCTCAGCGATTTCATTTGGCCTTAATCATGCAGCAACAGCGGTTT
TTGGATCAAGCTGCCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTPAFNASTPLAAPTPLRDGSRIRAVNTGTWIDPQADFSLLVERCKAQGWLLELPPSLHRQWQWFSGTDAQRRTELEDAW
RDPHVDGIVYIGSGWGGARVLEDGFHFPRRSLWSLGFSDSSALLLAQWAVGSRGAIHGSITGSDEQWQRTVDLLSCQSVA
PISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVDRMLTQWRSAGLLRDVAAVATGRFSWK
GEIVPGDFSMVGILEERLSSLGVPLVSDLPVGHGQPNLALPLGAIARLDGRNGSLMLLS

Sequences:

>Translated_299_residues
MTPAFNASTPLAAPTPLRDGSRIRAVNTGTWIDPQADFSLLVERCKAQGWLLELPPSLHRQWQWFSGTDAQRRTELEDAW
RDPHVDGIVYIGSGWGGARVLEDGFHFPRRSLWSLGFSDSSALLLAQWAVGSRGAIHGSITGSDEQWQRTVDLLSCQSVA
PISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVDRMLTQWRSAGLLRDVAAVATGRFSWK
GEIVPGDFSMVGILEERLSSLGVPLVSDLPVGHGQPNLALPLGAIARLDGRNGSLMLLS
>Mature_298_residues
TPAFNASTPLAAPTPLRDGSRIRAVNTGTWIDPQADFSLLVERCKAQGWLLELPPSLHRQWQWFSGTDAQRRTELEDAWR
DPHVDGIVYIGSGWGGARVLEDGFHFPRRSLWSLGFSDSSALLLAQWAVGSRGAIHGSITGSDEQWQRTVDLLSCQSVAP
ISGIGVIPGIAVGPLVVTNLTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVDRMLTQWRSAGLLRDVAAVATGRFSWKG
EIVPGDFSMVGILEERLSSLGVPLVSDLPVGHGQPNLALPLGAIARLDGRNGSLMLLS

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=284, Percent_Identity=31.3380281690141, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32252; Mature: 32121

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAFNASTPLAAPTPLRDGSRIRAVNTGTWIDPQADFSLLVERCKAQGWLLELPPSLHR
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCHHHHH
QWQWFSGTDAQRRTELEDAWRDPHVDGIVYIGSGWGGARVLEDGFHFPRRSLWSLGFSDS
CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHCCCCCC
SALLLAQWAVGSRGAIHGSITGSDEQWQRTVDLLSCQSVAPISGIGVIPGIAVGPLVVTN
CEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
LTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVDRMLTQWRSAGLLRDVAAVATGRFSWK
HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
GEIVPGDFSMVGILEERLSSLGVPLVSDLPVGHGQPNLALPLGAIARLDGRNGSLMLLS
CCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEECHHHHEEECCCCCCEEEEC
>Mature Secondary Structure 
TPAFNASTPLAAPTPLRDGSRIRAVNTGTWIDPQADFSLLVERCKAQGWLLELPPSLHR
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCHHHHH
QWQWFSGTDAQRRTELEDAWRDPHVDGIVYIGSGWGGARVLEDGFHFPRRSLWSLGFSDS
CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHCCCCCC
SALLLAQWAVGSRGAIHGSITGSDEQWQRTVDLLSCQSVAPISGIGVIPGIAVGPLVVTN
CEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
LTVATHLIGTPWFPDLRGAVLVLEDVGEAPYRVDRMLTQWRSAGLLRDVAAVATGRFSWK
HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
GEIVPGDFSMVGILEERLSSLGVPLVSDLPVGHGQPNLALPLGAIARLDGRNGSLMLLS
CCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEECHHHHEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]